LOC120545230


Basic Information

Item Value
gene id LOC120545230
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 5396633 ~ 5400678 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779410.1
acaggacagacagaaCAACAGACAGAACAGCaacagacaggacagacagaaCTGCACCTGATAGATTTGCTTGTTGCCGATTCTGATTCAGAACAAGGACAGACAGAACGACAGGCAGAAAACCACCAACAGCAGCAGTTCGAGCAGAGGTCGAAGATTAGAGCCTTACTATACAACTATAACTATACATGAACCAAGAGTTCATGTATAGTTAACGAAGCACTGGCACCACATTTCATGAATGAGTTGGTGGTACAAATGAGGGAAGGGCCATACACCCTCATCACAGATGGATCCAATGACACAGGAGTAGAGAAGATGAACCCCCTGACTGTCCGGATGTTTATGAATGAAAAAATTGTCCACCGCTTCCTGGGGATGTGTACTACTAGCGGAACAAGGTGTGGGACAGCAGACATCATCTTCAGCAAGATAAATGCCACCTTAGCAGAAAAGGCTATCCCATGGAAAAACTGTGTGGGTCTCTCTGTGGACAATGCTGCTGTGAACATAGGTTCAAAGAATTCCATCACCTCCAGAATCCTGAACGAACACTCCAGTATTTACGTTCATGGTTGCCCGTGTCATATAGTCCACAACACCACTAAAAGAGCTGGGATGGGATTTTTGGACGGGagtataggcctaattgtactTTACATACAACTGTCCAAATTTGATCTGGAGGACTTGGTAATTGATGTTGGCTACTGGTTCAAGGGTAGCACAAACCGAAAGGggtacttgacagatGATAATCAGGCAAGGTTCAGGAGACTTCAGAAGGCATTCTCTGACCCCATGACGGAGGTGTACCTACTGTTCTTCCAGGCTACCATACCAGTATTCACCTCATTCAACCTCCTGCTCCAGAGAGAACAGTCCTCAATATTTTTGTTACATGATGAGATGATGAACTTCATTCGCAAGCTGTGCACCAAGTTCACGGTGCCTTCCAGCGCTGCAGGAAGACAAACCGCTCTTGCTTTTTAAAGAAAAGGCAAACCATTTGCCAGGAAGAAAGCTGAATATTGGATTCAC
>XR_005636634.1
acaggacagacagaaCAACAGACAGAACAGCaacagacaggacagacagaaCTGCACCTGATAGATTTGCTTGTTGCCGATTCTGATTCAGAACAAGGACAGACAGAACGACAGGCAGAAAACCACCAACAGCAGCAGTTCGAGCAGAGGTCGAAGATTAGAGCCTTACTATACAACTATAACTATACATGAACCAAGAGTTCATGTATAGTTAACGAAGCACTGGCACCACATTTCATGAATGAGTTGGTGGTACAAATGAGGGAAGGGCCATACACCCTCATCACAGATGGATCCAATGACACAGGAGTAGAGAAGATGAACCCCCTGACTGTCCGGATGTTTATGAATGAAAAAATTGTCCACCGCTTCCTGGGGATGTGTACTACTAGCGGAACAAGGTGTGGGACAGCAGACATCATCTTCAGCAAGATAAATGCCACCTTAGCAGAAAAGGCTATCCCATGGAAAAACTGTGTGGGTCTCTCTGTGGACAATGCTGCTGTGAACATAGGTTCAAAGAATTCCATCACCTCCAGAATCCTGAACGAACACTCCAGTATTTACGTTCATGGTTGCCCGTGTCATATAGTCCACAACACCACTAAAAGAGCTGGGATGGGATTTTTGGACGGGagtataggcctaattgtactTTACATACAACTGTCCAAATTTGATCTGGAGGACTTGGTAATTGATGTTGGCTACTGGTTCAAGGGTAGCACAAACCGAAAGGggtacttgacagatGATAATCAGGCAAGGTTCAGGAGACTTCAGAAGGCATTCTCTGACCCCATGACGGAGGTGTACCTACTGTTCTTCCAGGCTACCATACCAGTATTCACCTCATTCAACCTCCTGCTCCAGAGAGAACAGTCCTCAATATTTTTGTTACATGATGAGATGATGAACTTCATTCGCAAGCTGTGCACCAAGTTCACGGTGCCTTCCAGCGCTGCAGGAAGACAAACCGCTCTTGCTTTTTAAAGAAAAGGCAAACCATTTGCCAGGTTTCCCAACCTGCTCCCCTACCATGGGCCTCAGGAGTATAACCTACTGAATGATGAGTTCCTGGAATACCAGACTATGCCAATACCACCCTTGCAGGCCCCAGAGGAAATTGAGATGGAGAGCTTCTGGGCTGAAATGGCTACCCGAAAACACAAGGTGACTGGTGTAAGCCTGTTCCCGGGGCTTGCCACCATTGCCAAGATTGTCCTGGTGCTCCCCCATTCAAATGCTGATGCGGACAGAGTGTTTTCTGTGGTGGGACTaaacaagaccaagaccagaaaCAGCCTTGCTCTGGATGGCACCCTTTCATCAATAATGACGATAAAAATGGCTGGAGCCCTGCTTCAAGTGGGAGACCCCCCAGCAATCATCAAGGCCTCTAAGAAGGCAGTTCAGTATAACAAGGCACACAGATCTTAAAGATCCCGTGTGTaaagtgtttagttgttcaaaATCTGTGTAGCTCATTCACAAacttcatgaatatttacctccaccatcaattccaagtattcctattggcttgaaattttacatttgcattcgcatgaactggagTAGACGCGCCATATTCATGCACCATCTTGAAACacgttagccagtaagggacatacaggacatactgctccgcctttcacgttttctctgtcacatgataaattca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779410.1 False 1041 mRNA 0.45 5 5398921 5400678
XR_005636634.1 True 1684 transcript 0.46 6 5396633 5400678

Neighbor

gene id symbol gene type direction distance location
pam pam coding downstream 83200 5177157 ~ 5313433 (-)
derl2 derl2 coding downstream 271196 5100579 ~ 5125437 (-)
LOC120545498 smarcb1b,LOC104928041,LOC103358289,LOC106535110,LOC100704669,LOC101070741 coding downstream 296569 5043560 ~ 5100064 (-)
ppp6c ppp6c,LOC102313764,LOC102783418,LOC100701794,LOC104928043,LOC103372694,LOC101475652,LOC108228845 coding downstream 385323 5002320 ~ 5011310 (-)
scai scai coding downstream 398676 4909583 ~ 4997957 (-)
LOC120545938 LOC101480421,LOC106530361 coding upstream 131707 5532385 ~ 5557976 (-)
LOC120545046 LOC101480421 coding upstream 165361 5566039 ~ 5573779 (-)
ccni ccni,LOC106529109,LOC106925549,LOC106963610 coding upstream 458295 5858973 ~ 5885428 (-)
LOC120545631 NA coding upstream 499774 5900452 ~ 5906700 (-)
LOC120545633 NA coding upstream 506681 5907359 ~ 5919472 (-)
G173093 NA non-coding downstream 15896 5378877 ~ 5380737 (-)
G173055 NA non-coding downstream 34407 5361595 ~ 5362226 (-)
G173050 NA non-coding downstream 42570 5353702 ~ 5354063 (-)
G172982 NA non-coding downstream 262020 5134330 ~ 5134613 (-)
G172981 NA non-coding downstream 266510 5129819 ~ 5130123 (-)
G173104 NA non-coding upstream 33539 5434217 ~ 5442206 (-)
G173112 NA non-coding upstream 61973 5462651 ~ 5465246 (-)
LOC120545002 NA non-coding upstream 93552 5494230 ~ 5498387 (-)
G173131 NA non-coding upstream 122845 5523523 ~ 5523760 (-)
G173136 NA non-coding upstream 185418 5586096 ~ 5586533 (-)
odf2a LOC103374699 other downstream 499276 4846279 ~ 4897357 (-)
G172920 NA other downstream 625330 4770817 ~ 4771303 (-)
dpm2 dpm2 other downstream 836865 4552871 ~ 4559768 (-)
cdk9 cdk9 other downstream 1248820 4139166 ~ 4147813 (-)
G172620 NA other downstream 1452802 3886588 ~ 3943831 (-)
LOC120544971 NA other upstream 967629 6368307 ~ 6374489 (-)
LOC120546140 NA other upstream 1420134 6820812 ~ 6820866 (-)
G173470 LOC103389048,LOC105418623 other upstream 1752192 7152870 ~ 7160087 (-)
G173727 LOC107687935 other upstream 2957045 8357723 ~ 8358027 (-)
LOC120545754 zfand5,LOC102789640,LOC104922891,LOC103362637,LOC102194010,LOC102308986 other upstream 3224804 8625482 ~ 8634067 (-)

Expression


Co-expression Network