LOC120545381 (LOC103364544,LOC103364545,LOC100697171,LOC104922463)


Basic Information

Item Value
gene id LOC120545381
gene name LOC103364544,LOC103364545,LOC100697171,LOC104922463
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 23472254 ~ 23492497 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779636.1
caccgccagccagccagccagccagccagcctccCCAGGCATGTGGAATGCACCTGAACTGGATCCTGCACGAGGAATGACTGATCAAAGTCGCCAAGCCACCTGTTCCGGGACAGGGACTGGTGAAAGTGGGAAGAGCACTTTCATCAAACAGATGAGGATCATCCATGGCAGTGGATACAGTGAAGATGACAGGAAAGGTTTCACTCGGCTAGTGTTTCAGAACATCGTCACAGCCATCCAGTCGCTGATCCACGCCATGAGGACTCTACGGATAGACTACGTTGATGACCAGAACATTGTCCTCCTGGGGATGGACCTGGCATCAGAGAGTAAAATGAACTCTGAGGGGGGCGAAGGCAGACCCGtccccCCTACCTCTCTATCCCTGCAAGGAGGTCCCACCCAAAGAAAAAAGCTATCTGCCCCTCGAATCAGCTTGTCACTGGACCAGAGCGAGGATGACTTGGGGGAGACGCCGGATGATCTCGACATTAACGTTGACGACCTCGACACTCCTGATGAGGGGGATTACCTCGACTACACGGACCATGAAATGGACTGGGAAGACCCCAATGCAGCCAATAGGAGCGGAACAAGTGAGCCTTACAATCCAATCCCGACATACAGCGCTGAAGAGGAGCGCCAGGACGGCAAACTATGGAGGACTGTCGTCATTGGGGAGCAGGAGCACCGCATCAACATGAAGATCATTGAGTCCTACATGAGAGTCATCTCCCATGGAGGCTACTATGGCAACGGAGCGAATGCCATCATAGTGTTTGCTGCCTGTTTCCTGCCAGACAGCGACAGAGAGGACTACCATGAAATAATGGAGAACCTCTTCCTctaTGTGATCAGCACATTGGAGCTGATGGTGGCAGAGGACTACATGATCGTGTACCTGAATGGAGCCACACCCCACAGAAGAATGCCTGGCCTTGGTTGGCTGAAGAAATGCTATCATATGATTGACAGAAGACTCAGGAAGAATTTGAAATCCTTCATTATTCTCCATCCATCATGGTTTATCAGGACTGTTCTAGCCATCACCAAGcccttcatcagCACCAAGTTCAGCAGTAAGATTAAGTATGTGAACAGTTTGGATGAACTACAGGAATTCATCCCCATGGATTCCATCCAGATCCCAGAGTGCATCATTAAACTTGACAAGGAACTGAAGGAAGCAGCGGAGAACTCAAAAATGAATAGTTTTCTGCTGGGACCGGAGCCAGCAGCGGGCGGAACAGAACCAGACGTAGCCGGTGCCAGCAGCTCTTAAACCCAAACATCCTAAATGGATGGGTCATCTCAATGTTCTGAAGTCACGTATTGTACGGGTGAAGCTGGAAAACAAAGTCGAAGGCTTGTAAAGctaatgtgtatgtttgtgaatTAGACACAGGAGTTTAATATGAAAACACAAGTTGCAATAGTTCCTGTTAACACTCAAGAGTTAGTTCTCATTCTTTATGGCTGCTGTAGCATCTCCTGTACATTTTTACACCTGCAATCCAGAGAATTATAAGTCAAGGGGGATGCTTGGCAGCACCTCTAGAGTAGCATCGTTGTTCACGGAGGGGTAGGAAATGCAATTACACACCCGACAGTGCACTGCACAAATCTATTTGTAGAGTATTGTGTTGTAGTTGTGTGCATGAGAAGCAGTTAAGCAATAATATCCCCCCTTTACTGGTCACACTCAGTATTTCAGATAAAGAGGGGACTTGTGCGACATCAATCTACAACAAAAGCACATGGTGTGGCCAAAAACCCTTGTGCCATAGATGACCAACTACTGCATTTAAGCAATCCAAAAATATTTAAACTTTTAGAGTATCTGAAACCAAGTCATCAGTGCAATTTGAGCGCATGTCTTTTTTGCTctgcaatgtgtgtgttttcaatcCATTTATCAGATCCATAAACTGGAAATAATCTCTTCAGCCTCTCCTGGATCatcaggaagaaacctcagagAAATAAGGATGGCATTTCTGTAAAGCACAATATCCTGTTTGTGCGTCAGTGCATGTCCCCTCATAGATACTAATGGTCCTCTTACCCATGAGTCTTCTATGGTGTATTGAGGATGTGTGAAGAAATAATGGAGCATTGTCTAGTAACTCAATAAAAATGGGCTGAAGTCTGAA
>XM_039779637.1
TTTGGGGTAGATTGAACACATTTAGGCCTAAACAGAGATGTTGGTATATCGTACATGGCTGTTCTCCATTATGTTTTCTTTCCTGAACTCTACCCTTTTACAGTCTTTGACTCTACTTCATTGTGGGAAACGAGTTTCAAATTCAGCGGCCCATCGGAGTATGGACCAGTAAGCAGATATATATACGCTGTCTACGTAAACTCacactgcctgcctgcctgcctgcccaccgccagccagccagccagccagccagcctccCCAGGCATGTGGAATGCACCTGAACTGGATCCTGCACGAGGAATGACTGATCAAAGTCGCCAAGCCACCTGTTCCGGGACAGGGACTGGTGAAAGTGGGAAGAGCACTTTCATCAAACAGATGAGGATCATCCATGGCAGTGGATACAGTGAAGATGACAGGAAAGGTTTCACTCGGCTAGTGTTTCAGAACATCGTCACAGCCATCCAGTCGCTGATCCACGCCATGAGGACTCTACGGATAGACTACGTTGATGACCAGAACATTagtcaCGCACAGAAGCTGAGCCAAGTGGTGGCAGACCAGGTGTCCACTTTGGAGGCTTGGCAGGCGGACGCCATTATGCGAGTGTGGAATGACCACGGTGTTCAAAGGTGCTACGACCGCAGGAGGGAATTCCAGTTATCGGACTCTGCCAAATATTACCTGAGTGACTTGGACAGAATCACAGCCCAGTCATACATCCCCACCCTGCAGGACATCTTGAGGGTCAGGGTCCCCACCACGGGCATCATAGAGTACCCCTTTGACCTGTCAAAAGTTATCTTCAGGATGGTGGATGTGGGCGGTCAGCGTTCAGAGAGGAGGAAATGGATCCACTGTTTTGAGAATGTCACTTCCATCATATTTCTAGCAGCCCTCAGCGAGTATGATCAAGTCCTTAACGAGAATGAGAAAGATAATCGACTGAAAGAGAGCGTCGCCTTGTTCAAGACCATCATCTCATACCCTTGGTTCCAGGAGTCCTCCATCATCCTCTTCCTGAACAAAACGGACTTGCTAGAGGAGAaaatcacacattcacatttgGCAACCTACTTCCCGGCCTTTACTGGGCCCCAGTGTGATGCTGGAGCTGCGAAAAAGTTCATCAAACAAATGTACGTTGATGAGCACCGAGGGCATCCTAAATCCTTTTACTCACACTACACCTGTGCCACGGACACAGGGAACATCCGGGTTGTATTCAAAGCAGTTGAAGATACAATACGCCAAGAGAACTTTGACCTGTTCAACCTCCAATAAGGAGGTTGTAGGACAAAGTGATGGTTTCACCTTTAGGTGCCTGGTTATACAGTGACATGTAACTTTTATGGACATTTTATCTGTTGTGCTGTCGGTTGCAGCTTGTTCAAAGACATCAAGAGGCAATCAGACAGCAATGACAGGTAAGGGACATTTATCCTTGCACTGTAAAATACAGGCAGTATatgccattttttttatataaatggtaaaaaaaaaaactttctattGCTACAGGAGAGAAATTAACAACTGCAATGTCAGTACTGAATTGTTATAGAGATTCCTTGCATACCATTGCTGTTAGATGGATAGTTAATAGTACTAAACTGGTTAGACAAAGTCTTGTCTACTAAGAATGCAACCCACCCTGCCTTACAGCGCTGTGAGGAGGAAGTAAAAGAATACCCTGCTGGGACCAACAATCCCAGAGTTTGTATTTATGctaatgtttttatgtgtgcagAAACAACCATGTAGCCtataaaatgattatttttcaCTAGATATTAAAGGTctgatattgtaaaaa
>XM_039779638.1
GAAAAATTATTACCCCTTCATTTTGCTAATCTCTGTCAGCTGGGGCGCAGTTTCACTAAAAGCGGCTCGTAGACTGGTACAACAATGGATTGCTGCCTGTCAGCTGAGGAAGCGGAGAGTCTCAAGATACACCGAGAAATAGAGAAACAACTTCGTCTTAATAAAAGAATCTCCCGCCGGGAGTTGAAGTTGCTGCTTTTAGGGACTGGTGAAAGTGGGAAGAGCACTTTCATCAAACAGATGAGGATCATCCATGGCAGTGGATACAGTGAAGATGACAGGAAAGGTTTCACTCGGCTAGTGTTTCAGAACATCGTCACAGCCATCCAGTCGCTGATCCACGCCATGAGGACTCTACGGATAGACTACGTTGATGACCAGAACATTagtcaCGCACAGAAGCTGAGCCAAGTGGTGGCAGACCAGGTGTCCACTTTGGAGGCTTGGCAGGCGGACGCCATTATGCGAGTGTGGAATGACCACGGTGTTCAAAGGTGCTACGACCGCAGGAGGGAATTCCAGTTATCGGACTCTGCCAAATATTACCTGAGTGACTTGGACAGAATCACAGCCCAGTCATACATCCCCACCCTGCAGGACATCTTGAGGGTCAGGGTCCCCACCACGGGCATCATAGAGTACCCCTTTGACCTGTCAAAAGTTATCTTCAGGATGGTGGATGTGGGCGGTCAGCGTTCAGAGAGGAGGAAATGGATCCACTGTTTTGAGAATGTCACTTCCATCATATTTCTAGCAGCCCTCAGCGAGTATGATCAAGTCCTTAACGAGAATGAGAAAGATAATCGACTGAAAGAGAGCGTCGCCTTGTTCAAGACCATCATCTCATACCCTTGGTTCCAGGAGTCCTCCATCATCCTCTTCCTGAACAAAACGGACTTGCTAGAGGAGAaaatcacacattcacatttgGCAACCTACTTCCCGGCCTTTACTGGGCCCCAGTGTGATGCTGGAGCTGCGAAAAAGTTCATCAAACAAATGTACGTTGATGAGCACCGAGGGCATCCTAAATCCTTTTACTCACACTACACCTGTGCCACGGACACAGGGAACATCCGGGTTGTATTCAAAGCAGTTGAAGATACAATACGCCAAGAGAACTTTGACCTGTTCAACCTCCAATAAGGAGGTTGTAGGACAAAGTGATGGTTTCACCTTTAGGTGCCTGGTTATACAGTGACATGTAACTTTTATGGACATTTTATCTGTTGTGCTGTCGGTTGCAGCTTGTTCAAAGACATCAAGAGGCAATCAGACAGCAATGACAGGTAAGGGACATTTATCCTTGCACTGTAAAATACAGGCAGTATatgccattttttttatataaatggtaaaaaaaaaaactttctattGCTACAGGAGAGAAATTAACAACTGCAATGTCAGTACTGAATTGTTATAGAGATTCCTTGCATACCATTGCTGTTAGATGGATAGTTAATAGTACTAAACTGGTTAGACAAAGTCTTGTCTACTAAGAATGCAACCCACCCTGCCTTACAGCGCTGTGAGGAGGAAGTAAAAGAATACCCTGCTGGGACCAACAATCCCAGAGTTTGTATTTATGctaatgtttttatgtgtgcagAAACAACCATGTAGCCtataaaatgattatttttcaCTAGATATTAAAGGTctgatattgtaaaaa
>XM_039779639.1
TCCATCCAGTTGCACTGCCTACAGCTGCTGCTGTGCTGAGAGCTGTGATAGCAGGTGATCGCCCTTATTTGGTGTGACCCAGATCATGTGACCACAAAATGGTGGAAGCTGTGAGCTGTTTGTAAGCTGAGCATCTCCACCGAGAGGCTGGGAGAAAAGGAAATAGGCAGGGAACTTGGAAGTACATCCATGCTCTGAGACGCAAAAGGACAAGAGATTCCCGATCCCCAGCAGTGGTCCTCCTGGGGATGGACCTGGCATCAGAGAGTAAAATGAACTCTGAGGGGGGCGAAGGCAGACCCGtccccCCTACCTCTCTATCCCTGCAAGGAGGTCCCACCCAAAGAAAAAAGCTATCTGCCCCTCGAATCAGCTTGTCACTGGACCAGAGCGAGGATGACTTGGGGGAGACGCCGGATGATCTCGACATTAACGTTGACGACCTCGACACTCCTGATGAGGGGGATTACCTCGACTACACGGACCATGAAATGGACTGGGAAGACCCCAATGCAGCCAATAGGAGCGGAACAAGTGAGCCTTACAATCCAATCCCGACATACAGCGCTGAAGAGGAGCGCCAGGACGGCAAACTATGGAGGACTGTCGTCATTGGGGAGCAGGAGCACCGCATCAACATGAAGATCATTGAGTCCTACATGAGAGTCATCTCCCATGGAGGCTACTATGGCAACGGAGCGAATGCCATCATAGTGTTTGCTGCCTGTTTCCTGCCAGACAGCGACAGAGAGGACTACCATGAAATAATGGAGAACCTCTTCCTctaTGTGATCAGCACATTGGAGCTGATGGTGGCAGAGGACTACATGATCGTGTACCTGAATGGAGCCACACCCCACAGAAGAATGCCTGGCCTTGGTTGGCTGAAGAAATGCTATCATATGATTGACAGAAGACTCAGGAAGAATTTGAAATCCTTCATTATTCTCCATCCATCATGGTTTATCAGGACTGTTCTAGCCATCACCAAGcccttcatcagCACCAAGTTCAGCAGTAAGATTAAGTATGTGAACAGTTTGGATGAACTACAGGAATTCATCCCCATGGATTCCATCCAGATCCCAGAGTGCATCATTAAACTTGACAAGGAACTGAAGGAAGCAGCGGAGAACTCAAAAATGAATAGTTTTCTGCTGGGACCGGAGCCAGCAGCGGGCGGAACAGACAGACCAGACGTAGCCGGTGCCAGCAGCTCTTAAACCCAAACATCCTAAATGGATGGGTCATCTCAATGTTCTGAAGTCACGTATTGTACGGGTGAAGCTGGAAAACAAAGTCGAAGGCTTGTAAAGctaatgtgtatgtttgtgaatTAGACACAGGAGTTTAATATGAAAACACAAGTTGCAATAGTTCCTGTTAACACTCAAGAGTTAGTTCTCATTCTTTATGGCTGCTGTAGCATCTCCTGTACATTTTTACACCTGCAATCCAGAGAATTATAAGTCAAGGGGGATGCTTGGCAGCACCTCTAGAGTAGCATCGTTGTTCACGGAGGGGTAGGAAATGCAATTACACACCCGACAGTGCACTGCACAAATCTATTTGTAGAGTATTGTGTTGTAGTTGTGTGCATGAGAAGCAGTTAAGCAATAATATCCCCCCTTTACTGGTCACACTCAGTATTTCAGATAAAGAGGGGACTTGTGCGACATCAATCTACAACAAAAGCACATGGTGTGGCCAAAAACCCTTGTGCCATAGATGACCAACTACTGCATTTAAGCAATCCAAAAATATTTAAACTTTTAGAGTATCTGAAACCAAGTCATCAGTGCAATTTGAGCGCATGTCTTTTTTGCTctgcaatgtgtgtgttttcaatcCATTTATCAGATCCATAAACTGGAAATAATCTCTTCAGCCTCTCCTGGATCatcaggaagaaacctcagagAAATAAGGATGGCATTTCTGTAAAGCACAATATCCTGTTTGTGCGTCAGTGCATGTCCCCTCATAGATACTAATGGTCCTCTTACCCATGAGTCTTCTATGGTGTATTGAGGATGTGTGAAGAAATAATGGAGCATTGTCTAGTAACTCAATAAAAATGGGCTGAAGTCTGAA

Function

NR:

description
PREDICTED: protein prune homolog 2-like isoform X2

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function
GO:0004871 obsolete signal transducer activity molecular_function
GO:0031683 G-protein beta/gamma-subunit complex binding molecular_function
GO:0001664 G protein-coupled receptor binding molecular_function

KEGG:

id description
K18449 PRUNE2, BMCC1; prune homolog 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779636.1 True 2156 mRNA 0.47 12 23472481 23492497
XM_039779637.1 False 1819 mRNA 0.46 7 23472254 23478955
XM_039779638.1 False 1678 mRNA 0.45 7 23472605 23478955
XM_039779639.1 False 2094 mRNA 0.46 11 23481199 23492497

Neighbor

gene id symbol gene type direction distance location
LOC120545384 LOC104922461,LOC103364542 coding upstream 1747 23458760 ~ 23470507 (+)
kcmf1 kcmf1 coding upstream 55044 23407372 ~ 23417210 (+)
itga1 itga1 coding upstream 65945 23356223 ~ 23406309 (+)
dhx29 LOC103364531 coding upstream 159723 23301589 ~ 23312531 (+)
plpp1a plpp1,LOC102797153 coding upstream 195166 23263472 ~ 23277088 (+)
zgc:73226 LOC102294317,LOC100705876,LOC101475642,LOC108230926,LOC103357984 coding downstream 85072 23577569 ~ 23583588 (+)
thbs4b LOC104922466,LOC103357985,LOC101475932,LOC102294017,LOC102209966 coding downstream 101510 23594007 ~ 23611205 (+)
LOC120545389 LOC103357986 coding downstream 119240 23611737 ~ 23619177 (+)
zgc:122979 LOC103357987 coding downstream 131613 23624110 ~ 23628080 (+)
hwa NA coding downstream 135847 23628344 ~ 23631172 (+)
G177177 NA non-coding upstream 45352 23424844 ~ 23426902 (+)
LOC120545237 NA non-coding upstream 124861 23336307 ~ 23347393 (+)
G177170 golph3,LOC103364537,LOC106962713 non-coding upstream 136677 23331898 ~ 23335577 (+)
G177169 NA non-coding upstream 141006 23330150 ~ 23331248 (+)
G177093 NA non-coding upstream 290987 23180700 ~ 23181267 (+)
G177244 NA non-coding downstream 43386 23535883 ~ 23536398 (+)
G177284 NA non-coding downstream 180765 23673262 ~ 23719373 (+)
LOC120545825 NA non-coding downstream 442350 23934847 ~ 23935801 (+)
LOC120545826 NA non-coding downstream 443504 23936001 ~ 23936681 (+)
LOC120545017 NA non-coding downstream 476760 23969257 ~ 23971641 (+)
hnrpkl LOC103364541,LOC100706673,LOC103155138,LOC103473466 other upstream 13649 23440983 ~ 23458605 (+)
G177094 NA other upstream 287992 23182673 ~ 23184262 (+)
klhl8 klhl8 other upstream 463420 22998253 ~ 23008834 (+)
G176870 cplx4 other upstream 934917 22531908 ~ 22537337 (+)
LOC120545252 NA other upstream 947849 22496413 ~ 22524405 (+)
rpl37 rpl37 other downstream 230981 23723478 ~ 23727242 (+)
LOC120546142 NA other downstream 231669 23724166 ~ 23724245 (+)
LOC120546141 NA other downstream 233477 23725974 ~ 23726052 (+)
dnlz dnlz,LOC104941974 other downstream 662888 24155385 ~ 24157621 (+)
G177596 map1b other downstream 1210474 24702971 ~ 24711641 (+)

Expression


Co-expression Network