LOC120545384 (LOC104922461,LOC103364542)


Basic Information

Item Value
gene id LOC120545384
gene name LOC104922461,LOC103364542
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 23458760 ~ 23470507 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779644.1
TAATAGTGAAAGCCCGCACGATTTCCCATCAAAGCCAGCCCTCTGTCACATGGTGCACTGTTGTTTCTCTACCCAGGATAGCGGacgggacaaaaaaaaaactggacgCAGAGGAAATAACACCGAGCTTCACCTATACAGAAAACCTGACGTGACGTGTTATCCAGGACTAATGACTCTGAGCTCCGTTGGGGCTTGCTGCCTCAGCCCAGAGGCCAAAGAGGCTCGCAGGATCAACGATGAGATTGAGAGGCAGCTCCGCCGGGACAAGAGGGACTCGCGACGGGAATACAAGCTCCTTTTGCTCGGAACTGGTGAAAGTGGGAAGAGCACTTTCATCAAGCAGATGAGGATCATCCATGGCCGTGGATACTCTGACGAGGACAAGAGAGGCTTCACCAGGCTGGTCTACCAGAACATCTTCACAGCCATGCAGGCCATGATCCAGGCCATGGACACATTAAAGATCCCCTACAAGTATGAACACAACAAGGCAAACGCCATTGTTGTCCGTGGGGTTGAGGTGGAGAAGGTCACAACATTAAAAAACCCTTACGTGGACGCCATCAAGAGCCTGTGGAGTGACCCAGGGATTCAGGAATGTTACAATCGTAAAAGGGAATACCAGCTCTCAGACTCAGCCAAATACTATCTGAATGACATGGACCGAATTTCAGATACTACTTATCTGCCAACCCAGCAGGATGTCCTGCGGGTCAGGGTGCCCACAACAGGTATTATAGAGTACCCCTTTGACCTGGAGAATGTGGTGTTCAGGATGGTGGATGTGGGTGGCCAGCGTTcagagaggaggaagtggaTTCACTGTTTTGAGGAAGTTACTTCCATCATGTTCCTGGTGGCGCTCAGCGAGTACGATCAGGTCCTTGTTGAGTCCGTCAATGAGAATCGCATGGAGGAAAGCATGGCCTTGTTCCGGACAATCATAACATACAAGTGGTTCAAAGAGTCTTCAGTCATCTTGTTTCTCAACAAGATAGATTTACTGGAGGAGAAAATTATGCACTCGCATTTGGTCGACTACTTCCCTGAATATGATGgTCCCCAGCAGGATGTCAAAGCAGGAAAACAATTCATCTTAGATATGTTTTTCAGTCTCAATCCAAACGAGAAAAAAATCATCTACTCCCACTTCACCTGtgccacagacacagacagcatTCGATTTGTCTTCAGCGCAGTGAAGGACCACATCTTGCATATCAACCTGGAAGTCTACAACTTGGTTTAAAAACGGTAGTGTTGCCGCTGTAATTCAATCGGCTTTGTACAGCTGGCAGTCTGGAGAGCTCTGCAGTGATTCAGTTTGCCTCACACTGCTGCTGAACACTATAATCCACAACAGGAAATTGAGAAGCTACAGAGCTTGTCGCCAAATGACTGTACTACTGATGTATTTCAAATTTCCCTGTTAGGCTCTTTGAAAATGCATGTCTGGAGCTATAATGAAGTGTGTCCTGACAATTAAAATGCTGCCTTAGTGAGGGGTCTATTATAGTATGCACTCTGAAATTTATGGAGCTCTTTTGTGAACATTTTCGAGCAGTAACAGTATAAATGCACATGGATGGATTGAGAGGGAAAATACAGTATTTCAGTGGCCTCAAAAGCCTCCGATGACTTGTAATGTACTAGGTCTCTCTTTCAGGGAATCTGTGGAAGTGAATGTAGACTAACTGCAATGCAGCACCTCCACTAACCCaagttatagtttttttttaaatactctaTGCTTATTTTGTGTCTTGACTTAAGGTGAAATGGAGTAATAATGaacactaatgacacatgtactgtattacATTGGTATTTGTGCTGatattctgtttgtgtgtagcTCACTTAGTTGGGTACTCTCATTTCCACAACCGCATTTCGTTTCACAAGACTTTGTACACTTTCGCATTTGTCTGTGATGGCATTATTCAGTCTTAAACCATGTTTTGTAAGCACAGTATTAATATATTTGTATGTAATTTAACAcacaagtttttattttgtcaaagcTGTAGAATTAAGTGTTCATGCAGTTCAGGGACTATTTGATTGGATTTTAAGTAGTTGTCTTGCCTAAAAGGCTTTTGCTAAAATGGCTTTAGAATTTGCCCCGTTATTTATCTGAATGCATATTGTAAATATCACATGGTACGTTAATGGTACACATTTTGCTTGCATCAAGGTCAATGTTGAAAGGCTAACTGCTAAAGGGAGAActgttacaataataataataatcaatgaTAATCACTGAGGTATTAAACTAGTGCATCCTTTTTTCATCTGCTGTTCAAGGGTATCAAATGCATGAATAAAAAGCTAATGAGAGTGTATCTATGGCACTAATGTTTACACAACCCTTTTCTTCTCATTAGAAATAATTACAGCCTAATTTGAACAGTAATTTATGGTTAGATTTCACTGTCACTGCGATGTCTTAATGCAGTTTTTGTTGGATAAATAAACATTTGctgctcagtt
>XM_039779646.1
CCTCTGTCACATGGTGCACTGTTGTTTCTCTACCCAGGATAGCGGacgggacaaaaaaaaaactggacgCAGAGGAAATAACACCGAGCTTCACCTATACAGAAAACCTGACGTGAGCATCATTTTCTTTGCCCTGGCGAATGACTTTTGCCAATTGTGTTGTTTTGTAGCGCTATGAAATAAAACTCCGCCATATTCAGCCCACCACGCCCGGAGCACAGCTACCAGGGAAGACCCACTGCTTCGCTCTTGTCTTCTTAAGTTGTTGCACCAACTTAATGTCCTCTTTACAGGAGAGGAACAAGGTGACGTGTTATCCAGGACTAATGACTCTGAGCTCCGTTGGGGCTTGCTGCCTCAGCCCAGAGGCCAAAGAGGCTCGCAGGATCAACGATGAGATTGAGAGGCAGCTCCGCCGGGACAAGAGGGACTCGCGACGGGAATACAAGCTCCTTTTGCTCGGAACTGGTGAAAGTGGGAAGAGCACTTTCATCAAGCAGATGAGGATCATCCATGGCCGTGGATACTCTGACGAGGACAAGAGAGGCTTCACCAGGCTGGTCTACCAGAACATCTTCACAGCCATGCAGGCCATGATCCAGGCCATGGACACATTAAAGATCCCCTACAAGTATGAACACAACAAGGCAAACGCCATTGTTGTCCGTGGGGTTGAGGTGGAGAAGGTCACAACATTAAAAAACCCTTACGTGGACGCCATCAAGAGCCTGTGGAGTGACCCAGGGATTCAGGAATGTTACAATCGTAAAAGGGAATACCAGCTCTCAGACTCAGCCAAATACTATCTGAATGACATGGACCGAATTTCAGATACTACTTATCTGCCAACCCAGCAGGATGTCCTGCGGGTCAGGGTGCCCACAACAGGTATTATAGAGTACCCCTTTGACCTGGAGAATGTGGTGTTCAGGATGGTGGATGTGGGTGGCCAGCGTTcagagaggaggaagtggaTTCACTGTTTTGAGGAAGTTACTTCCATCATGTTCCTGGTGGCGCTCAGCGAGTACGATCAGGTCCTTGTTGAGTCCGTCAATGAGAATCGCATGGAGGAAAGCATGGCCTTGTTCCGGACAATCATAACATACAAGTGGTTCAAAGAGTCTTCAGTCATCTTGTTTCTCAACAAGATAGATTTACTGGAGGAGAAAATTATGCACTCGCATTTGGTCGACTACTTCCCTGAATATGATGgTCCCCAGCAGGATGTCAAAGCAGGAAAACAATTCATCTTAGATATGTTTTTCAGTCTCAATCCAAACGAGAAAAAAATCATCTACTCCCACTTCACCTGtgccacagacacagacagcatTCGATTTGTCTTCAGCGCAGTGAAGGACCACATCTTGCATATCAACCTGGAAGTCTACAACTTGGTTTAAAAACGGTAGTGTTGCCGCTGTAATTCAATCGGCTTTGTACAGCTGGCAGTCTGGAGAGCTCTGCAGTGATTCAGTTTGCCTCACACTGCTGCTGAACACTATAATCCACAACAGGAAATTGAGAAGCTACAGAGCTTGTCGCCAAATGACTGTACTACTGATGTATTTCAAATTTCCCTGTTAGGCTCTTTGAAAATGCATGTCTGGAGCTATAATGAAGTGTGTCCTGACAATTAAAATGCTGCCTTAGTGAGGGGTCTATTATAGTATGCACTCTGAAATTTATGGAGCTCTTTTGTGAACATTTTCGAGCAGTAACAGTATAAATGCACATGGATGGATTGAGAGGGAAAATACAGTATTTCAGTGGCCTCAAAAGCCTCCGATGACTTGTAATGTACTAGGTCTCTCTTTCAGGGAATCTGTGGAAGTGAATGTAGACTAACTGCAATGCAGCACCTCCACTAACCCaagttatagtttttttttaaatactctaTGCTTATTTTGTGTCTTGACTTAAGGTGAAATGGAGTAATAATGaacactaatgacacatgtactgtattacATTGGTATTTGTGCTGatattctgtttgtgtgtagcTCACTTAGTTGGGTACTCTCATTTCCACAACCGCATTTCGTTTCACAAGACTTTGTACACTTTCGCATTTGTCTGTGATGGCATTATTCAGTCTTAAACCATGTTTTGTAAGCACAGTATTAATATATTTGTATGTAATTTAACAcacaagtttttattttgtcaaagcTGTAGAATTAAGTGTTCATGCAGTTCAGGGACTATTTGATTGGATTTTAAGTAGTTGTCTTGCCTAAAAGGCTTTTGCTAAAATGGCTTTAGAATTTGCCCCGTTATTTATCTGAATGCATATTGTAAATATCACATGGTACGTTAATGGTACACATTTTGCTTGCATCAAGGTCAATGTTGAAAGGCTAACTGCTAAAGGGAGAActgttacaataataataataatcaatgaTAATCACTGAGGTATTAAACTAGTGCATCCTTTTTTCATCTGCTGTTCAAGGGTATCAAATGCATGAATAAAAAGCTAATGAGAGTGTATCTATGGCACTAATGTTTACACAACCCTTTTCTTCTCATTAGAAATAATTACAGCCTAATTTGAACAGTAATTTATGGTTAGATTTCACTGTCACTGCGATGTCTTAATGCAGTTTTTGTTGGATAAATAAACATTTGctgctcagtt

Function

NR:

description
PREDICTED: guanine nucleotide-binding protein G(q) subunit alpha

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779644.1 False 2499 mRNA 0.42 8 23458760 23470507
XM_039779646.1 True 2653 mRNA 0.43 8 23458799 23470507

Neighbor

gene id symbol gene type direction distance location
kcmf1 kcmf1 coding upstream 41550 23407372 ~ 23417210 (+)
itga1 itga1 coding upstream 52451 23356223 ~ 23406309 (+)
dhx29 LOC103364531 coding upstream 146229 23301589 ~ 23312531 (+)
plpp1a plpp1,LOC102797153 coding upstream 181672 23263472 ~ 23277088 (+)
csgalnact1a LOC102302787 coding upstream 199218 23229837 ~ 23259542 (+)
LOC120545381 LOC103364544,LOC103364545,LOC100697171,LOC104922463 coding downstream 1747 23472254 ~ 23492497 (+)
zgc:73226 LOC102294317,LOC100705876,LOC101475642,LOC108230926,LOC103357984 coding downstream 107062 23577569 ~ 23583588 (+)
thbs4b LOC104922466,LOC103357985,LOC101475932,LOC102294017,LOC102209966 coding downstream 123500 23594007 ~ 23611205 (+)
LOC120545389 LOC103357986 coding downstream 141230 23611737 ~ 23619177 (+)
zgc:122979 LOC103357987 coding downstream 153603 23624110 ~ 23628080 (+)
G177177 NA non-coding upstream 31858 23424844 ~ 23426902 (+)
LOC120545237 NA non-coding upstream 111367 23336307 ~ 23347393 (+)
G177170 golph3,LOC103364537,LOC106962713 non-coding upstream 123183 23331898 ~ 23335577 (+)
G177169 NA non-coding upstream 127512 23330150 ~ 23331248 (+)
G177093 NA non-coding upstream 277493 23180700 ~ 23181267 (+)
G177244 NA non-coding downstream 65376 23535883 ~ 23536398 (+)
G177284 NA non-coding downstream 202755 23673262 ~ 23719373 (+)
LOC120545825 NA non-coding downstream 464340 23934847 ~ 23935801 (+)
LOC120545826 NA non-coding downstream 465494 23936001 ~ 23936681 (+)
LOC120545017 NA non-coding downstream 498750 23969257 ~ 23971641 (+)
hnrpkl LOC103364541,LOC100706673,LOC103155138,LOC103473466 other upstream 155 23440983 ~ 23458605 (+)
G177094 NA other upstream 274498 23182673 ~ 23184262 (+)
klhl8 klhl8 other upstream 449926 22998253 ~ 23008834 (+)
G176870 cplx4 other upstream 921423 22531908 ~ 22537337 (+)
LOC120545252 NA other upstream 934355 22496413 ~ 22524405 (+)
rpl37 rpl37 other downstream 252971 23723478 ~ 23727242 (+)
LOC120546142 NA other downstream 253659 23724166 ~ 23724245 (+)
LOC120546141 NA other downstream 255467 23725974 ~ 23726052 (+)
dnlz dnlz,LOC104941974 other downstream 684878 24155385 ~ 24157621 (+)
G177596 map1b other downstream 1232464 24702971 ~ 24711641 (+)

Expression


Co-expression Network