orai1b (orai1,LOC103390458)


Basic Information

Item Value
gene id orai1b
gene name orai1,LOC103390458
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 18384808 ~ 18387472 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779744.1
TGTGTCACGTGGACTGGTGTAATGGTTCATTTAACCGTTCAAgttgacattaacatgttttgaCCATTACTATACATTGGACGTGGTGATTACATCCGTATTCACTAGGGCTGATCAGGAGCTGATAATGGGGCTGATTCGTAATCTCATAACAGAGAAAATGCAACCCACAGTTGAGTGGCGGATGTTCGCCTCAGAGCGCGCAGGCTTATGGGTAATGTGAGGTGCAGGCAGTACACGTTGAAGACTGGTGGTGGAAAAATAGCTTCCGCAGTTGGCGAGGTTAAATGTTTTGTAAGTGTACACTGTTGGCATGTTGAACGCTTGTTTCTGTCGTGTTCCGCAAGAGTAACAAGGTAACCACGTAAGCGATGCTCGCCCAATCCTTTGATAACAGGAGCAACATGAGTCTGAACGAGCATTCACTGCAAGCACTGTCCTGGAGGAAGCTGTACCTGAGTCGAGCTAAACTGAAGGCTTCTAGTCGGACATCAGCTCTGCTTTCTGGATTCGCTATGGTGGCTATGGTAGAAGTGCAGCTGGACAACAGCTATCCTTACCCACCTGCTCTACTCATTGCCTTCAGTGCCTGCACCACTGTGCTTGTGGCTGTCCATCTGTTCGCTCTGATGGTCAGCACCTGCATTTTACCCAATATAGAGGCTGTCAGCAATGTCCACAACCTTAACTCTGTGAAGGAGTCTCCACACGAGCGAATGCATCACCACATTGAACTGGCATGGGCTTTTTCTACAGTTATTGGTACCTTACTCTTCCTAGCCGAGGTGGTTCTACTCTGCTGGGTCAAATTTTTGCCAGTTAAGCCCAATAAGTCCAGTAATAATACCGTTTCAGCTGGTGTGGCTGCTGCTATTACCTCCACCTCTATTATGGTTCCTTTTGGTTTAGTCTTCATAGTGTTTGCTGTGCATTTCTACCGTTCCTTGGTTAGCCACAAGACTGACAGACAGTTTCAGGAGCTGGAGGAACTTTCTAATCTCACCAGGCTACAAAACGAGCTGGACAACAGAGGGGAGTCTTCCATCTTGCAGTCTCCAAGCTCACATTTCCCATAGTGAAGTATGGCGGATACGCATCTATGGTGAAACTCTTGACTGCAAGTCAGAAACCACATTATTGGCTTCTAATTTTTTACAGGAATGAGGATGTCTCAAATCTTTGTTGTGACATTTACTTTTGTGAAAAGAGTTGTATTTTTTAGAAAACACGTTCGTTCAACTGTGAACTCAAAAATCTGCCGTAATGCATGTGACTTGAAATTGGAGTCTTAATTGAAGTTTTAACTATAATAGTTGTTTGATTTAACTTATAGACTCATCTCATATACACAATGGCAGAGGCTTCTGAACAACTTGGAACCCTGTCTGTTGCCTGCTGCATTTATTTACCTGTTTGTCAGTGAACACTGCAtttgttaatatatatatagtacctTGTTGTGTTTTGTAAACCACAAGTATTTAATTATCCTCCTTGTTCACTGTGTACATGATTTCTTGTGATGTCCACCAATTGTTTTTGTAATGCTTGTAGACTGACTCAACAGCTGCTAAAACAACCATGTtattagtatagtatatttGCTGACATCTGTAGCACAGGCTGTGGTGTTAAaataaacgtttttttttatcaaatgcCA
>XM_039779745.1
ATGTGTGTCACGTGGACTGGTGTAATGGTTCATTTAACCGTTCAAgttgacattaacatgttttgaCCATTACTATACATTGGACGTGGTGATTACATCCGTATTCACTAGGGCTGATCAGGAGCTGATAATGGGGCTGATTCGTAATCTCATAACAGAGAAAATGCAACCCACAGTTGAGTGGCGGATGTTCGCCTCAGAGCGCGCAGGCTTATGGGTAATGTGAGGTGCAGGCAGTACACGTTGAAGACTGGTGGTGGAAAAATAGCTTCCGCAGTTGGCGAGGTTAAATGTTTTGAGCAACATGAGTCTGAACGAGCATTCACTGCAAGCACTGTCCTGGAGGAAGCTGTACCTGAGTCGAGCTAAACTGAAGGCTTCTAGTCGGACATCAGCTCTGCTTTCTGGATTCGCTATGGTGGCTATGGTAGAAGTGCAGCTGGACAACAGCTATCCTTACCCACCTGCTCTACTCATTGCCTTCAGTGCCTGCACCACTGTGCTTGTGGCTGTCCATCTGTTCGCTCTGATGGTCAGCACCTGCATTTTACCCAATATAGAGGCTGTCAGCAATGTCCACAACCTTAACTCTGTGAAGGAGTCTCCACACGAGCGAATGCATCACCACATTGAACTGGCATGGGCTTTTTCTACAGTTATTGGTACCTTACTCTTCCTAGCCGAGGTGGTTCTACTCTGCTGGGTCAAATTTTTGCCAGTTAAGCCCAATAAGTCCAGTAATAATACCGTTTCAGCTGGTGTGGCTGCTGCTATTACCTCCACCTCTATTATGGTTCCTTTTGGTTTAGTCTTCATAGTGTTTGCTGTGCATTTCTACCGTTCCTTGGTTAGCCACAAGACTGACAGACAGTTTCAGGAGCTGGAGGAACTTTCTAATCTCACCAGGCTACAAAACGAGCTGGACAACAGAGGGGAGTCTTCCATCTTGCAGTCTCCAAGCTCACATTTCCCATAGTGAAGTATGGCGGATACGCATCTATGGTGAAACTCTTGACTGCAAGTCAGAAACCACATTATTGGCTTCTAATTTTTTACAGGAATGAGGATGTCTCAAATCTTTGTTGTGACATTTACTTTTGTGAAAAGAGTTGTATTTTTTAGAAAACACGTTCGTTCAACTGTGAACTCAAAAATCTGCCGTAATGCATGTGACTTGAAATTGGAGTCTTAATTGAAGTTTTAACTATAATAGTTGTTTGATTTAACTTATAGACTCATCTCATATACACAATGGCAGAGGCTTCTGAACAACTTGGAACCCTGTCTGTTGCCTGCTGCATTTATTTACCTGTTTGTCAGTGAACACTGCAtttgttaatatatatatagtacctTGTTGTGTTTTGTAAACCACAAGTATTTAATTATCCTCCTTGTTCACTGTGTACATGATTTCTTGTGATGTCCACCAATTGTTTTTGTAATGCTTGTAGACTGACTCAACAGCTGCTAAAACAACCATGTtattagtatagtatatttGCTGACATCTGTAGCACAGGCTGTGGTGTTAAaataaacgtttttttttatcaaatgcCA
>XM_039779746.1
ttcctAACTTAAAACTGGAGTAAAGGGTCATATTCAGTTTCTGATAACGTTACTATAGTAGCATATTTTTTTCCTAAACGTGACGTCAAGCACGATAACCATTAAACGACACTTGTCCTGGGAAAAGACAGCAGTTGGAGCAACATGAGTCTGAACGAGCATTCACTGCAAGCACTGTCCTGGAGGAAGCTGTACCTGAGTCGAGCTAAACTGAAGGCTTCTAGTCGGACATCAGCTCTGCTTTCTGGATTCGCTATGGTGGCTATGGTAGAAGTGCAGCTGGACAACAGCTATCCTTACCCACCTGCTCTACTCATTGCCTTCAGTGCCTGCACCACTGTGCTTGTGGCTGTCCATCTGTTCGCTCTGATGGTCAGCACCTGCATTTTACCCAATATAGAGGCTGTCAGCAATGTCCACAACCTTAACTCTGTGAAGGAGTCTCCACACGAGCGAATGCATCACCACATTGAACTGGCATGGGCTTTTTCTACAGTTATTGGTACCTTACTCTTCCTAGCCGAGGTGGTTCTACTCTGCTGGGTCAAATTTTTGCCAGTTAAGCCCAATAAGTCCAGTAATAATACCGTTTCAGCTGGTGTGGCTGCTGCTATTACCTCCACCTCTATTATGGTTCCTTTTGGTTTAGTCTTCATAGTGTTTGCTGTGCATTTCTACCGTTCCTTGGTTAGCCACAAGACTGACAGACAGTTTCAGGAGCTGGAGGAACTTTCTAATCTCACCAGGCTACAAAACGAGCTGGACAACAGAGGGGAGTCTTCCATCTTGCAGTCTCCAAGCTCACATTTCCCATAGTGAAGTATGGCGGATACGCATCTATGGTGAAACTCTTGACTGCAAGTCAGAAACCACATTATTGGCTTCTAATTTTTTACAGGAATGAGGATGTCTCAAATCTTTGTTGTGACATTTACTTTTGTGAAAAGAGTTGTATTTTTTAGAAAACACGTTCGTTCAACTGTGAACTCAAAAATCTGCCGTAATGCATGTGACTTGAAATTGGAGTCTTAATTGAAGTTTTAACTATAATAGTTGTTTGATTTAACTTATAGACTCATCTCATATACACAATGGCAGAGGCTTCTGAACAACTTGGAACCCTGTCTGTTGCCTGCTGCATTTATTTACCTGTTTGTCAGTGAACACTGCAtttgttaatatatatatagtacctTGTTGTGTTTTGTAAACCACAAGTATTTAATTATCCTCCTTGTTCACTGTGTACATGATTTCTTGTGATGTCCACCAATTGTTTTTGTAATGCTTGTAGACTGACTCAACAGCTGCTAAAACAACCATGTtattagtatagtatatttGCTGACATCTGTAGCACAGGCTGTGGTGTTAAaataaacgtttttttttatcaaatgcCA

Function

symbol description
orai1 Enables identical protein binding activity and store-operated calcium channel activity. Involved in calcium ion transport; positive regulation of adenylate cyclase activity; and positive regulation of calcium ion transport. Located in cytosol and plasma membrane raft. Is integral component of plasma membrane. Implicated in immunodeficiency 9 and tubular aggregate myopathy 2.

NR:

description
PREDICTED: calcium release-activated calcium channel protein 1

GO: NA

KEGG:

id description
K16056 ORAI1; calcium release-activated calcium channel protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779744.1 True 1663 mRNA 0.43 2 18385713 18387472
XM_039779745.1 False 1563 mRNA 0.42 3 18385710 18387472
XM_039779746.1 False 1403 mRNA 0.41 3 18384808 18387472

Neighbor

gene id symbol gene type direction distance location
rnf34b LOC102198247,LOC101472476,LOC102778596,LOC102300128,LOC100691293,LOC108232543 coding upstream 24221 18342719 ~ 18360587 (+)
ggt5b NA coding upstream 114419 18261271 ~ 18270389 (+)
LOC120544962 LOC104923128,LOC100702751,LOC101476754,LOC102201716 coding upstream 185114 18193174 ~ 18199694 (+)
anxa4 anxa4 coding upstream 199921 18176120 ~ 18184887 (+)
trim69 LOC103369922,LOC104923159,LOC104948156 coding upstream 277928 18102639 ~ 18106880 (+)
setd1ba setd1b coding downstream 17906 18405378 ~ 18421449 (+)
LOC120545648 NA coding downstream 71040 18458512 ~ 18461772 (+)
LOC120546057 iscu,LOC100705178,LOC102784710,LOC103373105,LOC104958920,LOC101065972,LOC105915304,LOC101167135 coding downstream 83775 18471247 ~ 18474039 (+)
LOC120546054 susd2 coding downstream 161315 18548787 ~ 18557460 (+)
LOC120546055 LOC103360654,LOC104934677,LOC104958911 coding downstream 171088 18558560 ~ 18560433 (+)
G175696 NA non-coding upstream 145861 18235236 ~ 18238947 (+)
G175695 LOC103473718,LOC103148770,LOC106925514,LOC101169050,LOC106514486 non-coding upstream 150646 18231033 ~ 18234162 (+)
G175687 NA non-coding upstream 175749 18207774 ~ 18209059 (+)
G175670 NA non-coding upstream 236261 18147542 ~ 18148547 (+)
G175666 LOC104923170 non-coding upstream 290655 18086033 ~ 18094153 (+)
G175772 NA non-coding downstream 34057 18421529 ~ 18422678 (+)
G175792 NA non-coding downstream 42212 18429684 ~ 18431697 (+)
G175797 NA non-coding downstream 62330 18449802 ~ 18451068 (+)
G175804 rnf185 non-coding downstream 76798 18464270 ~ 18466064 (+)
G175891 NA non-coding downstream 200287 18587759 ~ 18588293 (+)
lrrc75bb LOC102299816,LOC101473269,LOC102199085,LOC100691028,LOC103366102 other upstream 55983 18295836 ~ 18328825 (+)
antxr1b LOC100694769,LOC102799311,LOC101477777,LOC102295999 other upstream 239358 18124842 ~ 18145450 (+)
G175640 LOC102204295,LOC100701817,LOC103369925,LOC106514495,LOC101480226 other upstream 289285 18067132 ~ 18095523 (+)
LOC120545364 NA other upstream 304357 18075032 ~ 18080451 (+)
lhx6a lhx6,LOC103363386 other upstream 1128344 17241997 ~ 17256464 (+)
tmem120b tmem120b,LOC101471304,LOC102195879 other downstream 4267 18391739 ~ 18400446 (+)
myo1hb LOC103374943,LOC101465300,LOC102786650 other downstream 149159 18536631 ~ 18548141 (+)
cabp7b cabp7,LOC104925332 other downstream 247554 18635026 ~ 18651069 (+)
LOC120545610 NA other downstream 269052 18656524 ~ 18657619 (+)
srsf9 srsf9,LOC104958899,LOC100707309 other downstream 288549 18676021 ~ 18723785 (+)

Expression


Co-expression Network