LOC120545462 (ppef2,LOC103366113)


Basic Information

Item Value
gene id LOC120545462
gene name ppef2,LOC103366113
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 23074570 ~ 23088410 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779791.1
TATAGTGATCACGGGGCCTTTCCCAAGACAGTTGGCTCTGCTATTCACAAGCTACTCAGCCAGTGTTGCGTTTGTGATGGATGGGAGTGTGTAGCTGCAGAGAGGGGACTTCCAATTAAAACATTACAGCAACTGGGACCTTTGCTGCGGTGCCTGGGAAATGAAAAGTGAAAACAGCAAAGGGTCATGGGATGTGGCATGGGAAAAACTCAACTACAGCTGAAGAAATGTGACAGAGTAAGCATCTCAGTTCCAGCTGCCACTGCAATCAGAGCGGCTCTGTTGATCCAGCGCTGGTACCGTCAGTATGCTGCCCGGCTGGAGATGAGACGCAGGTGCACGTGGAAAATCTTCCAGTCTATTGAATATGCAGGAGAGCAAGACCAGATCAAGCTCTATACTTTTTTTGGGTTCTTGATGGACCACTTCACCCCAGCCAGCAGTGAAAGAAACCTTATATCTCACATCTTTCGCAAGAATGAATTCTGTCATGACACAGAATGGGAGAGATATTTTTGCTACAAGAGCATTGAGGTAACTGACAGCTACACTGGCCCCCACCTTACTTTCCCCATGACCTTCTGTGGCGTGTCTAAGCTGGTGGAGGCCTTCAAGCACAAACAACAGCTTCATGCTCAATATGTTCTGCAGCTTCTCGGAGAGACTTGGAGACTTCTAAGAATTTTTCCAAACATCAGTCAAATCTCTGCCTACCACAACAAGCAGATTACCATATGCGGAGATTTACATGGGCAGCTTGAAGACCTGCTGTTGATATTCTATAAGAATGGTTTGCCGTCCTCTGAGAAACCGTATGTCTTCAATGGAGACTTTGTGGATCGTGGTAAAAATTCATTAGAGATCCTGCTCATCCTATTCGGGTTCCTGCTCGTCTATCCCAATGATGTGCATCTGAACAGAGGGAACCATGAGGACCACATTGTAAACCTGAGatatggtttcactaaagaagttTTGGGAAAATATAGGGTGCATGGCAAAAAGATCCTAAAGCTTCTCCAGAAGATTTTCAGCTGGCTGCCTCTGGCCACAGTGATTGATAACAAGGTGCTGATTGTGCATGGTGGGATCTCTGACAAGACAGACCTTGACGCGATAGCCAGAGTGGacagacacaaaTATGGGTCGGCTCTCACGCCTCCGAAGCCCACCAAGCATGCAGTCAATGGCAGTAAGACTCAGACAATAAACAACAGGGAGGCCTGTGGACCAGTGGAAGGCCGACGTCGAGTGTGTTCTCTGACTTACTGCAGCTCGGGCCCCGCTCACAGGCACGACCTTCCACGCCGCTCGCTCCACAACGCGCACGTGAGCAGTCAATTCAACTGGTCGTTGGAAAAAGAGCTGAAAAAGAGGCGCAGGATGGCAGGGTTTGACCAATCCTACGGAGAACTGAGGAAGTCTGACTCGGACTCAGACCCGGAGTCTGGAGAAACAACAGAGACAGATGTGGGTGAGTGGAAACAAATAGTGGATGTGTTGTGGAGTGACCCAATGGCCCAAAATGGCTGCATTCCCAATGAGGTGCGAGGCGGAGGCTGCTACTGGGGGCCAGATGTCACTGAGGAGGTGCTGGGAAGACACAACCTTCAGCTCCTCATCCGCTCCCATGAGTGCAAACAGGACGGCTATGAGTTCTGCCACAACCGCAGGGTGCTGACTATATTTTCAGCATCTAACTACTACGAGGTTGGCAGCAACAGAGGAGCCTACATCAGAATGGGCCCCGATCTGGTCCCCCACTTCATTCAGTACCAGGCCAGCAGGACATGCAGAGAGCTCACCCTGAGACAAAGTGTCGGGTGGACAGAGAGATCAGCTCTGAGAGCTCTGAGGGAACAACTGTTCGTACATAAGTCCGATCTCATCAGTGCCTTCCAGGAGTTTGATCCTAACAACAAAGGGATGATCTCTCTGAGGCACTGGGCCAGCGCCACAGAGAGAGTACTGAATCTGGGTCTGCCCTGGAGGTTACTGCGCCCTCAGCATGTAAGCAGCACCCAGTGTGGCATGGTGGACTACCAGCAGTGGATAAGGGAGCTCTCCATCACTGAGCCCAAACAAGAGATCTCAGATAACAGCATCCTGGAGACTATGTACAAAAACCACTCTAACCTAGAAACCATCTTCCGAATCATAGACACAGATCACTCAGAGTTGCGTTTCCTGAATTTCTACAACAAAAGTTTGATCACTTTTGAGGAGTTTCGTCAAACCTGGAAACTCCTGAGCTCTCACCTTCAGACAGAGATCAGTGACAAGGCCATCGCAGACCTGGCGCAGAGCATCGACTTCAACAAGGACGGAGTCATTGATATCAATGAGTTCATGGAGGCTTTCAGGTTGGTGGATATCTCTGCACATACCTGAGGGCCTGGACTAGAAGCTGTAGCTGTacctgctgctctgctgcatagAGGAAACCAACAACTGTCTTGGATAGACTTGGTCACCTGGATACACATCTGtggaaattaaaatgtatagTAGTGTCTTATCCATTTCACCTGTGCATATCAACCTAGATCTCTTCTACCGCTTATATTTTTGGCTCTCTTTTTTTACCTATATTTATGTAAGAAGTTAGTGTATTAAGGATTTATGTGTGTAACTTCATGACCAACTTAGTTatgcataaaaaaacatgaaacaccT
>XM_039779792.1
TAGTGATCACGGGGCCTTTCCCAAGACAGTTGGCTCTGCTATTCACAAGCTACTCAGCCAGTGTTGCGTTTGTGATGGATGGGAGTGTGTAGCTGCAGAGAGGGGACTTCCAATTAAAACATTACAGCAACTGGGACCTTTGCTGCGGTGCCTGGGAAATGAAAAGTGAAAACAGCAAAGGGTCATGGGATGTGGCATGGGAAAAACTCAACTACAGCTGAAGAAATGTGACAGAGTAAGCATCTCAGTTCCAGCTGCCACTGCAATCAGAGCGGCTCTGTTGATCCAGCGCTGGTACCGTCAGTATGCTGCCCGGCTGGAGATGAGACGCAGGTGCACGTGGAAAATCTTCCAGTCTATTGAATATGCAGGAGAGCAAGACCAGATCAAGCTCTATACTTTTTTTGGGTTCTTGATGGACCACTTCACCCCAGCCAGCAGTGAAAGAAACCTTATATCTCACATCTTTCGCAAGAATGAATTCTGTCATGACACAGAATGGGAGAGATATTTTTGCTACAAGAGCATTGAGGTAACTGACAGCTACACTGGCCCCCACCTTACTTTCCCCATGACCTTCTGTGGCGTGTCTAAGCTGGTGGAGGCCTTCAAGCACAAACAACAGCTTCATGCTCAATATGTTCTGCAGCTTCTCGGAGAGACTTGGAGACTTCTAAGAATTTTTCCAAACATCAGTCAAATCTCTGCCTACCACAACAAGCAGATTACCATATGCGGAGATTTACATGGGCAGCTTGAAGACCTGCTGTTGATATTCTATAAGAATGGTTTGCCGTCCTCTGAGAAACCGTATGTCTTCAATGGAGACTTTGTGGATCGTGGTAAAAATTCATTAGAGATCCTGCTCATCCTATTCGGGTTCCTGCTCGTCTATCCCAATGATGTGCATCTGAACAGAGGGAACCATGAGGACCACATTGTAAACCTGAGatatggtttcactaaagaagttTTGGGAAAATATAGGGTGCATGGCAAAAAGATCCTAAAGCTTCTCCAGAAGATTTTCAGCTGGCTGCCTCTGGCCACAGTGATTGATAACAAGGTGCTGATTGTGCATGGTGGGATCTCTGACAAGACAGACCTTGACGCGATAGCCAGAGTGGacagacacaaaTATGGGTCGGCTCTCACGCCTCCGAAGCCCACCAAGCATGCAGTCAATGGCAGTAAGACTCAGACAATAAACAACAGGGAGGCCTGTGGACCAGTGGAAGGCCGACGTCGAGTGTGTTCTCTGACTTACTGCAGCTCGGGCCCCGCTCACAGGCACGACCTTCCACGCCGCTCGCTCCACAACGCGCACGTGAGCAGTCAATTCAACTGGTCGTTGGAAAAAGAGCTGAAAAAGAGGCGCAGGATGGCAGGGTTTGACCAATCCTACGGAGAACTGAGGAAGTCTGACTCGGACTCAGACCCGGAGTCTGGAGAAACAACAGAGACAGATGTGGGTGAGTGGAAACAAATAGTGGATGTGTTGTGGAGTGACCCAATGGCCCAAAATGGCTGCATTCCCAATGAGGTGCGAGGCGGAGGCTGCTACTGGGGGCCAGATGTCACTGAGGAGGTGCTGGGAAGACACAACCTTCAGCTCCTCATCCGCTCCCATGAGTGCAAACAGGACGGCTATGAGTTCTGCCACAACCGCAGGGTGCTGACTATATTTTCAGCATCTAACTACTACGAGGTTGGCAGCAACAGAGGAGCCTACATCAGAATGGGCCCCGATCTGGTCCCCCACTTCATTCAGTACCAGGCCAGCAGGACATGCAGAGAGCTCACCCTGAGACAAAGTGTCGGGTGGACAGAGAGATCAGCTCTGAGAGCTCTGAGGGAACAACTGTTCGTACATAAGTCCGATCTCATCAGTGCCTTCCAGGAGTTTGATCCTAACAACAAAGGGATGATCTCTCTGAGGCACTGGGCCAGCGCCACAGAGAGAGTACTGAATCTGGGTCTGCCCTGGAGGTTACTGCGCCCTCAGCATGTAAGCAGCACCCAGTGTGGCATGGTGGACTACCAGCAGTGGATAAGGGAGCTCTCCATCACTGAGCCCAAACAAGAGATCTCAGATAACAGCATCCTGGAGACTATGTACAAAAACCACTCTAACCTAGAAACCATCTTCCGAATCATAGACACAGATCACTCAGGTTTGATCACTTTTGAGGAGTTTCGTCAAACCTGGAAACTCCTGAGCTCTCACCTTCAGACAGAGATCAGTGACAAGGCCATCGCAGACCTGGCGCAGAGCATCGACTTCAACAAGGACGGAGTCATTGATATCAATGAGTTCATGGAGGCTTTCAGGTTGGTGGATATCTCTGCACATACCTGAGGGCCTGGACTAGAAGCTGTAGCTGTacctgctgctctgctgcatagAGGAAACCAACAACTGTCTTGGATAGACTTGGTCACCTGGATACACATCTGtggaaattaaaatgtatagTAGTGTCTTATCCATTTCACCTGTGCATATCAACCTAGATCTCTTCTACCGCTTATATTTTTGGCTCTCTTTTTTTACCTATATTTATGTAAGAAGTTAGTGTATTAAGGATTTATGTGTGTAACTTCATGACCAACTTAGTTatgcataaaaaaacatgaaacaccT

Function

symbol description
ppef2 Enables Hsp70 protein binding activity; Hsp90 protein binding activity; and mitogen-activated protein kinase kinase kinase binding activity. Involved in negative regulation of MAPK cascade and negative regulation of peptidyl-threonine phosphorylation. Predicted to be located in photoreceptor inner segment and photoreceptor outer segment. Predicted to be active in cytosol and nucleus.

NR:

description
PREDICTED: serine/threonine-protein phosphatase with EF-hands 2-like

GO: NA

KEGG:

id description
K13807 PPEF, PPP7C; serine/threonine-protein phosphatase with EF-hands

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779791.1 True 2676 mRNA 0.48 20 23074570 23088410
XM_039779792.1 False 2644 mRNA 0.48 19 23074572 23088410

Neighbor

gene id symbol gene type direction distance location
LOC120544950 LOC103473489,LOC103142714,LOC106917991,LOC106959058,LOC108231074 coding upstream 38474 23015127 ~ 23036096 (+)
sdad1 sdad1 coding upstream 77729 22990154 ~ 22996841 (+)
LOC120545187 NA coding upstream 85254 22985204 ~ 22989316 (+)
ptpn13 ptpn13 coding upstream 89650 22936704 ~ 22984920 (+)
arhgap24 arhgap24,LOC102789489 coding upstream 182047 22824300 ~ 22892523 (+)
amacr amacr coding downstream 67428 23155838 ~ 23165201 (+)
slc45a2 slc45a2 coding downstream 81077 23169487 ~ 23202930 (+)
nxnl2 nxnl2 coding downstream 135277 23223687 ~ 23226613 (+)
csgalnact1a LOC102302787 coding downstream 141427 23229837 ~ 23259542 (+)
plpp1a plpp1,LOC102797153 coding downstream 175062 23263472 ~ 23277088 (+)
G176974 NA non-coding upstream 140925 22893156 ~ 22933645 (+)
G176908 NA non-coding upstream 327244 22747108 ~ 22747326 (+)
G176906 LOC107085810,LOC102226223,LOC103473886,LOC106958946,LOC106918003,LOC105921164 non-coding upstream 360073 22713906 ~ 22714497 (+)
G176905 hcn1,LOC108278484,LOC106958946 non-coding upstream 368446 22705726 ~ 22706124 (+)
G176904 hcn1,LOC104948050,LOC106560798,LOC107749006,LOC107662227,LOC103390262 non-coding upstream 412752 22661584 ~ 22661818 (+)
G177039 scarb2,LOC104955650,LOC107395254 non-coding downstream 16232 23104642 ~ 23116716 (+)
G177043 NA non-coding downstream 46239 23134649 ~ 23134887 (+)
G177079 NA non-coding downstream 53319 23141729 ~ 23141935 (+)
G177089 NA non-coding downstream 78149 23166559 ~ 23171678 (+)
G177091 NA non-coding downstream 83842 23172252 ~ 23177502 (+)
klhl8 klhl8 other upstream 65736 22998253 ~ 23008834 (+)
G176870 cplx4 other upstream 537233 22531908 ~ 22537337 (+)
LOC120545252 NA other upstream 550165 22496413 ~ 22524405 (+)
G176753 NA other upstream 792407 22278880 ~ 22282163 (+)
G176526 NA other upstream 2127515 20946684 ~ 20947055 (+)
G177094 NA other downstream 94263 23182673 ~ 23184262 (+)
hnrpkl LOC103364541,LOC100706673,LOC103155138,LOC103473466 other downstream 352573 23440983 ~ 23458605 (+)
rpl37 rpl37 other downstream 635068 23723478 ~ 23727242 (+)
LOC120546142 NA other downstream 635756 23724166 ~ 23724245 (+)
LOC120546141 NA other downstream 637564 23725974 ~ 23726052 (+)

Expression


Co-expression Network