dnm1a (dnm1)


Basic Information

Item Value
gene id dnm1a
gene name dnm1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 20181745 ~ 20236007 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779813.1
CCTTGCGCCCCCCCCGCTGCGCTTGGTGGAGAGGAGTGTTCATGTTCGGTGGTGGAGAGAGTCCTGTTTGAGGTGATCTGACACACCGAGGGGACGCAGTCAATGACGGGGCAAACCGAAAAGTGAATCGGTGTGGCGTAATCCAAAAACGCCCTCTAAACGCGAGGGTGGCGAGGAGGGACgaagagaaaaataagaaataaatccCTCCCTGCTCTGACAAGGAGGATAGACTGACCATTACATCGCAAAGATGGGGAACAGGGGAATGGAGGATTTGATTCCTCTGGTGAACCGCATGCAGGATGCCTTCTCCGCCATCGGTCAGAACGCGAACCTGGACCTGCCCCAGATCGCCGTGGTGGGGGGCCAGAGTGCGGGGAAAAGCTCGGTGCTGGAGAACTTCGTCGGGAGGGATTTCCTTCCCCGTGGCTCTGGCATTGTGACTCGCCGTCCTTTGGTTCTGCAGCTGATAAACAGCCCCACAGAACATGCCGAGTTCCTCCACTGTAAGGGCAAAAAGTTCACAGATTTTGATGAGGTCCGGCAGGAGATAGAGGCAGAGACTGACCGCATCACCGGGGCCAACAAGGGCATCTCCCCTGTGCCCATCAACCTGCGTGTCTACTCCCCTAATGTGCTGAACCTGACCCTGGTGGACCTGCCGGGTATGACCAAAGTGCCGGTGGGCGACCAACCTGCAGACATCGAGTCCCAGATTAGAGAAATGCTGATGCAGTTTGTCACCAAGGATAACTGCCTGATGCTGGCTGTATCCCCGGCCAACTCTGATCTGGCCAACTCAGATGCTTTAAAGATTGCCAAAGAGGTCGACCCTCAGGGTATGAGGACCATTGGTGTGATCACAAAGCTGGACCTGATGGACGAGGGGACAGATGCTAAGGACATCCTGGAGAATAAGCTGCTTCCACTCAGGAGGGGTTACATCGGTGTGGTGAACAGAAGCCAAAAGGACATAGATGGCAGGAAGGACATCAATGCTGCTATGGCTGCTGAGAGGAAGTTTTTTCTCTCCCACCCTGCATATAGACACCTGGCCGACCGTATGGGAACTCCCTACCTCCAGAAAATCCTCAATCAGCAACTGACCAACCACATCCGGGACACCCTGCCGGGTCTGCGGGCCAAGCTGCAGAGTCAGCTTCTCTCCATAGAGAAGGAGGTGGAAGAGTACAAGAACTTCAGACCTGACGATCCGTCTCGCAAGACCAAGGCTCTGCTCCAGATGGTGCAGCAGTTCTCTGTGGACTTTGAGAAGTGTATAGAGGGCTCCGGGGACCAGATTGACACAGCTGAGCTGTCAGGTGGTGCCAGAATCAATCGCATCTTCCATGAACGCTTTCCCTTTGAACTGGTCAAGATGGAGTTTAATGAGAAAGAGCTCCGCAAGGAGATCAGCTACGCCATAAAGAACATTCACGGAATCAGAACTGGCCTCTTCACCCCGGACATGGCCTTTGAGACCATTGTGAAAAGGCAGATTGGGAAGATTAAAGAGCCATGCACCAAATGTGTGGACATGGTCATTTCTGAGCTAGTCAATACGGTTAGGCAGTGTACCAAGAAGCTCGCTCAGTATCCCATGTTgagagaggagatggagagaatCGTCACCCAGCACATCAGGGACAGAGAAAGCCGTGCTAAGaaccaggTGTTGCTGTTGATAGACATTGAGTTATCATATATGAACACCAACCATGAGGACTTCATTGGATTTGCTAATGAAATGTGTGTCAAAAGGCTTATTGTGTTATTTActttttctctgtttgtctgtgtctctcagGTGATAAGGAAAGGTTGGCTGACCATCAACAACATCAGCATCATGAAGGGAGGAGCCAAGGAGTACTGGTTTGTCCTCACCGCAGAATCTCTGTCCTGGTATAAAGACGATGAGgagaaggagaagaagtaCATGCTGCCGGTGGACAACCTGAAGCTGCGTGATGTGGAGAAAGGCTTCATGTCCAGCAAGCACATCTTTGCCCTCTTCAACACCGAACAGAGGAATGTGTATAAAGACTACCGTCAGCTGGAGCTGGCCTGTGAGACTCAGGAAGACATTGATGCTTGGAAGGCCTCCTTCCTCAGAGCTGGAGTTTATCCTGAACGGGTCACGgagaaagaaggaaagAGTGAAGGCAGTGATGAAAATGGCTCTGACAACATAATGCACAGCATGGACCCTCAGCTGGAGCGGCAGGTGGAGACCATTCGTAACCTGGTTGACTCCTACATGGCCATCGTCAACAAGACCGTCCGCGACTTGATGCCGAAGACGATCATGCACCTCATGATTAACAATACTAAAGAGTTCATCAACGCAGAGCTGCTGGCCCAGCTGTACTCGTGCGGCGACCAGAACTCACTGATGGAGGAGTCTCAGGAGCAGGCCCAGCACCGCGACGAGATGCTGCGGATGTACCACGCCCTGCGGGAGGCCCTCGACATCATCGGTGACATCAGCACATCCACCATAACCACCACCATGCCGCCTCCCGTGGATGACTCCTGGCTGCAGGTGCAGCGGAGTGGCTCCGGAGGAAGGTCTCCAGCCACCAGTCCAACTCCAAACCGCAGGGCTCCACCGGGACCTCCAGGCCGCCCGGTCTCTCGTGGGCCTCCACCTGGGCCTCCTCCCGCTGGGGGACCCCCAGTCCCGTCTCGCCCAGGGGCTTCTCCGGACCCTTACAGTGGGCCACCACCCACCGTGCCCTCCCGGCCTAACCGCGCACCCCCAAGTGTGCCCAGTCGGAGACCCCCACCTTCTCCAACCCACTAGACCTCTGAGctcctccccctctccatcTGTCCGTCCCACCTCCAGATGAGAGGCCATGGACAACAGTGCCACCTTCCTGTCGTTTTTTGCCATACCCGACATGAGCCGGCTCCCTTCTCCTGCTCCTACTTTTCCCTTACaagtcacgcacacacacaacacacacatacacacacacacatacacacctctgTTTCACACAGAGACGCAGAATACTTGAAACACACCTGCATGACTGACATACGAACATGCTGCACCCCTCCCCTCAgaatttaaataaactatttagagaatataaaataaataattgatacATTTTTGAGTGTATGCCCACATGCGCATGCACACTGcttacataaatacacacacatatactgtataaatacaAGCAAATACATACAGACTATGTGTTCCTGCTATTAAACCTAAGGTGGGAGACGTGCATACTGAGCATGACACTTTGCCTGAGTATTACATTATACTCCAGTCTTTCCAATTGGTATTCTGGCTGCTGACTGACttatttctttcctctttttaaCATTTGTTTATCATAtgtttcttttatgttttttttttcctgatttctttaaaaaaaattcggTCACTTGTGTGTTTAACAAAATAAGGGGGAAAAGGATCACAGACTCCTCGCTCCCAGATACCTGGACAGACAGGAGCTGCTGCTCTTCagtcccccacccctcctcctcctcctccccttgcatTAGGACTGAAGTGATCATCATCTGTTGTAGTATCCAGAAGGCCTCAGTGTCACTAAATTCACCTGGGTCATAACTTTCTTGTTTAGTAGAATCATGAGTGGACAGCCAAATAGTTCACATAACTGTGTCACAACCACCTCTCGAAAACGCTGTTGTCTGTGCTTCCACACAACCTATGCAACAATGAAAATTGTTTCCCaatccttttctcttttttttgcctCAAAGAGGCCCCTCCAATGGCCCTTTTCCCACTTTCCTCCTCATTACAAAAACTTTGTCAATGTGTTATCTTATTGAGGCGGGATCTAAATAGAAAGTGCAATATGTGGAATATCATTCTGCAGACAGTTGCATGACACCAGTCACACAATAATCAGAGTATATTTCAACTGAGAAGAAGTGAATCTGTGGCCTGGGTGTCTTGCACCCAGAGACTGTTCGATAGCTCCTCATACATCCTTTTTATTCAGAGGGAATGAGGTCCCTAATAGGAAAGGTTTCAAATATTTGGAGTGTGTTTCTAAGTCAGTTCCAATCACATTATGCATCAAATCCTCTGATATACTGACTGGGAAAACTTTTAGCATTTTATCCAGGTTTATGATcagcatgtatttattttctgtttgtttttttcttcttttcttctttctcagtGGCCACGTGGGTGAGTGAGAACATGAAAACAGCCACAGTCTATGcataaaactatcaaaacacTCCTCCTGTTTCCCCCTCACATTGCTGTCTGAGAGCCTGTGAGTTCAACCGTTCTTTTCAGCTGTTCTGCAACTGAACTTTGCTGTCAGTGTGATGTGTTGTATTTTGACCCCAAACAAAAATAAGCAACCCACCAGCCACAAAAACCCGTCTCTGAAcctaaagtgatgtcattttaaccatttaaaaaaacacttcagtGACCCCTTGTGCATCTTAGTACTCCACGACTGCAACGCAAACACAACAAAGCATATTCTACTTATTATTtaacagtaaatatggacatatcTTAATGTGttattatgtatatgtgtggtgcATCTTATGAGAATTGTACTTCCACTGTCTAGAGAATTTAGTCTGCtgaatatttaaattattatgAATAAATGACTATGTGTATAAGGAAATATTTGAAAAACTTATAAAAATGTGTaatgcagtatatatatatatatatatggacatTGCCAGGTTGTTTGATACTCTAGCTGGTAGCAGAGaggtttttgtttagttttttcttgTTTCTCTCTATGTGTAGAAGAGCAGAAAGGgacagtgtgaatgtgtgaagtCCTGCAACAACCAGGTCCTGTGTCTTGTTTAAACTGCTGTGGACGGAACGATGACTTTACGCTGCAGGACTACTGTGCTTTGTCAACACATTAAAAACCTCTGTGTACTGAAA

Function

symbol description
dnm1 Enables identical protein binding activity. Involved in endosome organization and receptor-mediated endocytosis. Located in nucleoplasm. Implicated in developmental and epileptic encephalopathy 31. Biomarker of Alzheimer's disease.

NR:

description
PREDICTED: dynamin-1 isoform X2

GO:

id name namespace
GO:0006184 obsolete GTP catabolic process biological_process
GO:0005874 microtubule cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K01528 DNM1_3; dynamin 1/3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779813.1 True 4954 mRNA 0.48 20 20181745 20236007

Neighbor

gene id symbol gene type direction distance location
bbln clg14h9orf16,LOC103376136,LOC106518230,LOC103028983 coding upstream 11000 20167927 ~ 20170745 (+)
traf2b traf2 coding upstream 131522 20037864 ~ 20050223 (+)
bspry bspry,LOC100703027,LOC102783296 coding upstream 153315 20020957 ~ 20028430 (+)
LOC120545547 LOC103368295 coding upstream 211633 19963771 ~ 19970112 (+)
pax8 pax8,LOC102780591 coding upstream 237902 19929571 ~ 19943843 (+)
hspa5 hspa5 coding downstream 26768 20262775 ~ 20266809 (+)
rgs3a rgs3,LOC102788614,LOC104953710 coding downstream 41280 20277287 ~ 20425401 (+)
znf618 znf618,LOC101485385 coding downstream 222349 20458356 ~ 20497767 (+)
trim32 trim32 coding downstream 460045 20696052 ~ 20701783 (+)
lhx3 lhx3,LOC102793556 coding downstream 1225119 21461126 ~ 21472938 (+)
G176357 fubp3,LOC106522831 non-coding upstream 90887 20089106 ~ 20090858 (+)
G176335 LOC103376127 non-coding upstream 94104 20079851 ~ 20087641 (+)
LOC120544937 NA non-coding upstream 111915 20068760 ~ 20069830 (+)
G176346 fbxw5 non-coding upstream 119761 20055289 ~ 20061984 (+)
G176292 mtfp1 non-coding upstream 288966 19888869 ~ 19892779 (+)
G176410 NA non-coding downstream 1520 20237527 ~ 20241216 (+)
LOC120545553 NA non-coding downstream 201164 20437171 ~ 20440566 (+)
LOC120545557 NA non-coding downstream 261815 20497822 ~ 20499818 (+)
G176477 NA non-coding downstream 264459 20500466 ~ 20502348 (+)
G176507 NA non-coding downstream 700799 20936806 ~ 20937292 (+)
LOC120545241 LOC105930800,LOC102780299,LOC103149678,LOC107095870,LOC100701678 other upstream 267065 19911836 ~ 19914680 (+)
LOC120545529 ermp1,LOC102800265 other upstream 779366 19380250 ~ 19402379 (+)
srsf9 srsf9,LOC104958899,LOC100707309 other upstream 1457960 18676021 ~ 18723785 (+)
LOC120545610 NA other upstream 1524126 18656524 ~ 18657619 (+)
cabp7b cabp7,LOC104925332 other upstream 1530676 18635026 ~ 18651069 (+)
pappaa pappa other downstream 279340 20515347 ~ 20620786 (+)
G176526 NA other downstream 710677 20946684 ~ 20947055 (+)
G176753 NA other downstream 2042873 22278880 ~ 22282163 (+)
LOC120545252 NA other downstream 2260406 22496413 ~ 22524405 (+)
G176870 cplx4 other downstream 2295901 22531908 ~ 22537337 (+)

Expression


Co-expression Network