phf24 (phf24)


Basic Information

Item Value
gene id phf24
gene name phf24
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 12077578 ~ 12114065 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779879.1
CTcggagagggaggggggctgCAAATATGATGGTTATAAATCCGTGATTGAACTTCAGTGGGCGCCTGTGAGTCTGCAGCTAAGGACTCCTGCCTCCAACAGCCAGCAATCTGCGTGTCTCTCCTCAGATGCTGAGGGAGTAGCTCAGAAAGGAGGGTGGAGgaagaacacacaaaaaaaaacaagagaaagaCATTTCAGCACCGGAGCTGTCCGCGGCTCTTGGAGAAGTCTCGATTGCTGCCAAGGGGAGAGAGGCTGCTTCCGACTGTAAATTGTCCTCTGTGGGACTGTGAGGAAGGAGGGAATAATAAACTGCCGTGCCATTCATCTCTCTGCGGGGCTTCCGACAGGCGAGTAACGGCGCACATAGGCTACTTCATTCGAGCAAAGTCTTGCCATGCTGGACGGCCGGGCTTGAGACAGAAAGGATAAAGTCACCACACAAGTCGAGGTGAAAAAGCCAGCCTTTACTCTTTAAGCCATGGGAGTGCTCATGTCAAAGAAGCAGCAGGTGGAGAAGGTGCAGAAATGCAACGCTGTTGTCTCTGCCTTCCAGGCGGGCATTAAGGACCGCCCTGCCCCAGCAAAACAGGCAGACGGAGAAGTGGAGGACGGCGAGGGCCCTGCCAAACCTTCAGCCGCTCCTGACAAGAACACCCAGGAGGCGGAGCGAGAGGAAACGGACAATAGCGCAGGTCCGTCGACCTCCCACCAGGCCTCGGGGCCGGCGAAGGACGAGTGTAAGGCCAACCAGGAGTCTTGGTCCAGGCTACGGGACGGGAAAGGAGTAGAGCCTGAAGATCTTGACAAGAGCCATCAGCTCACGCCGCCTGCTTTCGTGCGTCCCAAAAGGGAAGCCGATGATGACCAGCCTGTAGAGGTGGAGCTGGAAAAGAAAGAGCAGCCACCGAGCGATGAgatgtgtgaagtgtgtgaggTGTGGACGGCCGACGACCTGTACCCATGCAGGATCTGCACTCGGATGTTCCACGACGGCTGCCTGAGGGAGCTGGGCTACCTGCGTGCCGAGGCCCTGCAGGAGATGAAAGACACGGCCCACACCGTTACCGGCTGGAGCTGCTACTATTGCGATAATTTGAATCTACTCCTAACAGAGGAAGAGATGTACAGCCTTCTGGAGACGTTTAAGCAGTGCAAGATCATCCCAGAGTCATGCCTGGTGTCAGATGAGCTGCTGCAGTACCGCCACTTTGTATCCAAGCAGCAGTTTGATAAGGACCTAACTGATGAGCAAGAGGAGGAAGTCCTCGCCCAGTTTGCAGCGCTGGATCCTGAGAAGAAGGGTCACATTGAATGGTCGGACTTCCTTTACTTTGAGTCTATGGCAGTCTTGAGGAAGTTTCGCACGGAGaaCTCAATGGTGCGTCTGCTGACTGCCAAGGAGAGAAACAACGCACGGTCAGTGTTCCTGGGTCTGGACCTGGATAAAGACGGTGTGATCACAAAAGCAGAATGCCGCCAGGCCCAGCAGTCTTGGTTCCacaaactcagcaaagactcgCAGTCTTGCAACGTGAGACTCATGGGACTCTGCTCTCCTTTGTATTGTGGTATAAGTCATGTTGGCCCCATATGCGAGAGCAGCCCAGCCAGCTCTGGCAGTGAAAGGAGCAAGACTGAAGACAGCAGGCCAGTGACCTGGGAAGACTTTTTAAAGGAGAGTGCCATCTACATTTTGGCTGCGCGGGCCAATAGTTCTGCCATGCACATCCGTCTGCCTCTATAGTCCAGGATCCTCCACTGCAccccagcagagagagagagagagagaaagagagagagagagagagagagagagagagagagagagagagagagagaaccctATAGTCTACAGATGAGCGGAGGAAGAAAGACGTGGTGACACGATGACATGTGGAAGGCAACTTAGCGAACTGCATGAAGCACTGAGAGACAGCAGATCAAGCTATCGACAGAATCTCTCCTCCTCTGCGTCACCACAATACCACAACActtgacaacacacacacacacaaacacacgcgcgCTGATTGACACACCAACAACGCAAGTGACAGCAGCTGTCACAGGTCCCGACTCCCAAAAACTTGACGGCTTCCAACAAATGTGAAAGATAGCACAAAGGAAGACAACTACCCACCCACGACTCAGTTAGTGATAATTCTGAAACTTAGTAGTATAGCGATCATCCAAACAATCAGACAAGCTCCTAGGATGCTTGGACTCTACGAAATGACAAACATCACACACTGTATGGCCCTCCAGCTGCATAACACACCTCTCCATGCGGGTACATTAGTGTGACATGCTGTTACTCTTTCAAGTATTCATTCCGTTGGGCCTCATCATGTCCTAATAATAATTctatgctactgtaaaatgaatTGTGTTATTCGCCATCAAAATTGTTAATCACAGTACACAGAGGCACATGCAAATTCAAATTATCATTACTGGTACTGTTTGACGAGTGGGTAGAATTCTGCAGCCATTATCAGAACGTATACCAAACAGGAATCAAAGCTATCTGCGTACATACTATTATATGAGAAGAAGTGCTATTCATGccagtataaattattatcatGCATTAAAATGCTGTATTTATTCCTGTATCCTCTGATGTATCCTCTGTTTTCCCCAGTCTCATCCAAGAGTGTATGTTCTTCTGAAGTACTAACCGTGAAAAAGGATGTGAACGTTGATTAAAGCTAACCCAGAAAAAGACGCGCATATACTGCCATATAGTACATGTTGTTCCTGTTGTGCTCAGAGCTGCACTTTGACAATGTGGAAACGTCTGCCCTCCTGTTCTACTGTCATTATTTCCACTGTGGGAATGAGATGTGGATGGACTACTGTGTGACATAATCACTGTAATGAAATACTGGAAGACAATGGGAGCTCTGGTGCAAACATTTGTCCTTTGTCAATATGCAGAAGCACTGTTTAAAATATTGTTATGGAAAATGTGGTTGGAATTCTATAATGTTACAGGTTATACAACAATTTAAATTACTGCACATAATACTGCCCATAGAAGCACTGGAAACATACTGTAACATGTAAATCTTCATGTAGTGTTTATGCCATGTAATGCCAGGTCCTCTTAGCGAAAAAAGTATGGTTATGACATGAATCTTGTCTGAGGGATATGTCAAAGTGCTGAAATAAATGCATGGCATTTACTCTCCTCAA
>XM_039779881.1
ggggggctgCAAATATGATGGTTATAAATCCGTGATTGAACTTCAGTGGGCGCCTGTGAGTCTGCAGCTAAGGACTCCTGCCTCCAACAGCCAGCAATCTGCGTGTCTCTCCTCAGATGCTGAGGGAGTAGCTCAGAAAGGAGGGTGGAGgaagaacacacaaaaaaaaacaagagaaagaCATTTCAGCACCGGAGCTGTCCGCGGCTCTTGGAGAAGTCTCGATTGCTGCCAAGGGGAGAGAGGCTGCTTCCGACTGTAAATTGTCCTCTGTGGGACTGTGAGGAAGGAGGGAATAATAAACTGCCGTGCCATTCATCTCTCTGCGGGGCTTCCGACAGGCGAGTAACGGCGCACATAGGCTACTTCATTCGAGCAAAGTCTTGCCATGCTGGACGGCCGGGCTTGAGACAGAAAGGATAAAGTCACCACACAAGTCGAGGTGAAAAAGCCAGCCTTTACTCTTTAAGCCATGGGAGTGCTCATGTCAAAGAAGCAGCAGGTGGAGAAGGTGCAGAAATGCAACGCTGTTGTCTCTGCCTTCCAGGCGGGCATTAAGGACCGCCCTGCCCCAGCAAAACAGGCAGACGGAGAAGTGGAGGACGGCGAGGGCCCTGCCAAACCTTCAGCCGCTCCTGACAAGAACACCCAGGAGGCGGAGCGAGAGGAAACGGACAATAGCGCAGGTCCGTCGACCTCCCACCAGGCCTCGGGGCCGGCGAAGGACGAGTGTAAGGCCAACCAGGAGTCTTGGTCCAGGCTACGGGACGGGAAAGGAGTAGAGCCTGAAGATCTTGACAAGAGCCATCAGCTCACGCCGCCTGCTTTCGTGCGTCCCAAAAGGGAAGCCGATGATGACCAGCCTGTAGAGGTGGAGCTGGAAAAGAAAGAGCAGCCACCGAGCGATGAgatgtgtgaagtgtgtgaggTGTGGACGGCCGACGACCTGTACCCATGCAGGATCTGCACTCGGATGTTCCACGACGGCTGCCTGAGGGAGCTGGGCTACCTGCGTGCCGAGGCCCTGCAGGAGATGAAAGACACGGCCCACACCGTTACCGGCTGGAGCTGCTACTATTGCGATAATTTGAATCTACTCCTAACAGAGGAAGAGATGTACAGCCTTCTGGAGACGTTTAAGCAGTGCAAGATCATCCCAGAGTCATGCCTGGTGTCAGATGAGCTGCTGCAGTACCGCCACTTTGTATCCAAGCAGCAGTTTGATAAGGACCTAACTGATGAGCAAGAGGAGGAAGTCCTCGCCCAGTTTGCAGCGCTGGATCCTGAGAAGAAGGGTCACATTGAATGGTCGGACTTCCTTTACTTTGAGTCTATGGCAGTCTTGAGGAAGTTTCGCACGGAGaaCTCAATGGTGCGTCTGCTGACTGCCAAGGAGAGAAACAACGCACGGTCAGTGTTCCTGGGTCTGGACCTGGATAAAGACGGTGTGATCACAAAAGCAGAATGCCGCCAGGCCCAGCAGTCTTGGTTCCacaaactcagcaaagactcgCAGTCTTGCAACGTGAGTATAAGTCATGTTGGCCCCATATGCGAGAGCAGCCCAGCCAGCTCTGGCAGTGAAAGGAGCAAGACTGAAGACAGCAGGCCAGTGACCTGGGAAGACTTTTTAAAGGAGAGTGCCATCTACATTTTGGCTGCGCGGGCCAATAGTTCTGCCATGCACATCCGTCTGCCTCTATAGTCCAGGATCCTCCACTGCAccccagcagagagagagagagagagaaagagagagagagagagagagagagagagagagagagagagagagagagaaccctATAGTCTACAGATGAGCGGAGGAAGAAAGACGTGGTGACACGATGACATGTGGAAGGCAACTTAGCGAACTGCATGAAGCACTGAGAGACAGCAGATCAAGCTATCGACAGAATCTCTCCTCCTCTGCGTCACCACAATACCACAACActtgacaacacacacacacacaaacacacgcgcgCTGATTGACACACCAACAACGCAAGTGACAGCAGCTGTCACAGGTCCCGACTCCCAAAAACTTGACGGCTTCCAACAAATGTGAAAGATAGCACAAAGGAAGACAACTACCCACCCACGACTCAGTTAGTGATAATTCTGAAACTTAGTAGTATAGCGATCATCCAAACAATCAGACAAGCTCCTAGGATGCTTGGACTCTACGAAATGACAAACATCACACACTGTATGGCCCTCCAGCTGCATAACACACCTCTCCATGCGGGTACATTAGTGTGACATGCTGTTACTCTTTCAAGTATTCATTCCGTTGGGCCTCATCATGTCCTAATAATAATTctatgctactgtaaaatgaatTGTGTTATTCGCCATCAAAATTGTTAATCACAGTACACAGAGGCACATGCAAATTCAAATTATCATTACTGGTACTGTTTGACGAGTGGGTAGAATTCTGCAGCCATTATCAGAACGTATACCAAACAGGAATCAAAGCTATCTGCGTACATACTATTATATGAGAAGAAGTGCTATTCATGccagtataaattattatcatGCATTAAAATGCTGTATTTATTCCTGTATCCTCTGATGTATCCTCTGTTTTCCCCAGTCTCATCCAAGAGTGTATGTTCTTCTGAAGTACTAACCGTGAAAAAGGATGTGAACGTTGATTAAAGCTAACCCAGAAAAAGACGCGCATATACTGCCATATAGTACATGTTGTTCCTGTTGTGCTCAGAGCTGCACTTTGACAATGTGGAAACGTCTGCCCTCCTGTTCTACTGTCATTATTTCCACTGTGGGAATGAGATGTGGATGGACTACTGTGTGACATAATCACTGTAATGAAATACTGGAAGACAATGGGAGCTCTGGTGCAAACATTTGTCCTTTGTCAATATGCAGAAGCACTGTTTAAAATATTGTTATGGAAAATGTGGTTGGAATTCTATAATGTTACAGGTTATACAACAATTTAAATTACTGCACATAATACTGCCCATAGAAGCACTGGAAACATACTGTAACATGTAAATCTTCATGTAGTGTTTATGCCATGTAATGCCAGGTCCTCTTAGCGAAAAAAGTATGGTTATGACATGAATCTTGTCTGAGGGATATGTCAAAGTGCTGAAATAAATGCATGGCATTTACTCTCCTCAA

Function

symbol description
phf24 Predicted to enable metal ion binding activity. Orthologous to human PHF24 (PHD finger protein 24).

NR:

description
PHD finger protein 24-like isoform X1

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779879.1 True 3204 mRNA 0.49 9 12077578 12114065
XM_039779881.1 False 3159 mRNA 0.49 8 12077578 12114053

Neighbor

gene id symbol gene type direction distance location
prkab1a prkab1,LOC103357303 coding downstream 9159 12057731 ~ 12068419 (-)
LOC120544995 LOC103357302,LOC104927697 coding downstream 20966 12054684 ~ 12056612 (-)
LOC120544994 LOC103357302 coding downstream 23999 12052635 ~ 12053579 (-)
rxraa rxra,LOC102786191,LOC102297781 coding downstream 659926 11183862 ~ 11417652 (-)
vav2 vav2 coding downstream 936653 10913714 ~ 11140925 (-)
pigo pigo coding upstream 48228 12162293 ~ 12173384 (-)
LOC120546050 stoml2 coding upstream 61318 12175383 ~ 12184483 (-)
stbd1 NA coding upstream 198171 12312236 ~ 12318795 (-)
musk musk coding upstream 308769 12422834 ~ 12467165 (-)
si:busm1-57f23.1 NA coding upstream 376186 12490251 ~ 12497952 (-)
G174341 NA non-coding downstream 311118 11766230 ~ 11766460 (-)
G174335 NA non-coding downstream 331158 11746071 ~ 11746420 (-)
G174327 NA non-coding downstream 416716 11660525 ~ 11660862 (-)
G174325 NA non-coding downstream 417754 11659436 ~ 11659824 (-)
G174324 NA non-coding downstream 455918 11621447 ~ 11621660 (-)
G174403 unc13b,LOC102798935 non-coding upstream 140753 12254818 ~ 12255275 (-)
G174430 NA non-coding upstream 173349 12287414 ~ 12342288 (-)
G174443 lpar1 non-coding upstream 295259 12409324 ~ 12416934 (-)
G174481 NA non-coding upstream 451637 12565702 ~ 12569571 (-)
G174482 NA non-coding upstream 513142 12627207 ~ 12627427 (-)
LOC120545042 NA other downstream 913084 11153767 ~ 11164494 (-)
adra1ab LOC104947653,LOC100705829 other downstream 1681834 10378956 ~ 10395744 (-)
gtf3c4 gtf3c4,LOC102793669 other downstream 1969289 10097251 ~ 10108289 (-)
grin1a grin1a,LOC107600932,LOC103389281,LOC105024190,LOC106513393,LOC100534577,LOC101475684,LOC104936329,LOC102201489,LOC102777117,LOC102302700 other downstream 2174571 9861001 ~ 9903007 (-)
G174120 NA other downstream 2234079 9842812 ~ 9843499 (-)
G174439 NA other upstream 242863 12356928 ~ 12357890 (-)
G174442 lpar1 other upstream 276490 12390555 ~ 12391484 (-)
tmem267 tmem267 other upstream 517160 12631225 ~ 12637494 (-)
cntfr cntfr,LOC108232720,LOC103473535 other upstream 532221 12646286 ~ 12918560 (-)
ier3ip1 ier3ip1,LOC106633120,LOC102779563,LOC104954869 other upstream 1327215 13441280 ~ 13444079 (-)

Expression


Co-expression Network