LOC120545547 (LOC103368295)


Basic Information

Item Value
gene id LOC120545547
gene name LOC103368295
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 19963771 ~ 19970112 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779960.1
CGTGCGACTGTCTCCTGCTTTTGTTTCTTCCGCACACGGCAGCACAGAGTCGCACAGCCACACACCCACTTTTTTCCAGATACTTTCAACCGTGTACAAACCATCTGGCGAGTTGTCCACAGTTGCAACCGCTCGGTCTAACATGGCCAAGTCGAGTGATCTCAAACTCTTCCTGGAGTCTTCTCTGAATGAGATATTTAAAGCCACAGTAAGCGACATCCTGGACTCAGTGGACCGGACCCTGTCTGAGTACCAGGGCACAATACACAGGATCGAGTCTGAAAACGAGGGCCTGAAGCGGCTGCTGTTTGCACAGAAAAGTACAGAGTCTGCTGCAAAAGGAGGAGACAGAAGACCGGAAGCAGACGTAAATGCAGatgTTCGTGAACAAGATGCCACTGAAAAGTCTTTCACTTCAGAATGGAACAGTCGTCTCGTCAGCTCCACCCAGGGCTCGTTCAAGATGTCCATATGCAGCAGTGACAAGAAGAGCTTCAGGAGGAAGCAGAAAGACAAGATGAGGGAGAGCATATCCCCTTCCTCCTTTTTACTGCAGACTGATCATATGGTAGAAAGACCATGTATGAACACAGCAGAGGTAGGTGTGTCAACCCCAAACTTGATATCTGTAAAAGCAGAGCCTGGCCTGGATGAAAGCGGTGCTATTGACCTCTCCCAGCCTCCATCCCTTCTCAATCTGACAATGAGGCCAATAAAAAATGAGAGCACAGAGGTCAGTTTTGACAGTCACGATGCATATGCGCCACTGCCGCCATCTACAGGCCTCAAACAAGAATCCAGAGGCAGTGACAGTGAAGTTAAAGTCACCATTGTTTCTGACACTTACATGCAGGATGGACAGTTCATtaagacagaggaagaggagcagagtGGCGTGCTGCAGTATGGTGACAATGACATTTTCTCTAAGCAAGAGTTGGACCATGCAATGAGATATTACCCTGAATCAGAAATAGATCCTGAGGCAACGAGCAGACAAGTTGTGGAGCCAGAAGTAATGGTGCAGGAGAAAAACGCTGCTGTTCCCGCAGATGGATTTTTGGAGATCCGTGACAACTTTCTCCGTTGTCCCACCTGTCCCAAAACATTTAGTCGAGCAGCCTCACTCAACATCCACATCAAGACACACAGCGCTGAAAAGGCGCACAGCTGCAGCTACTGTGGCAAACGCTTTGGCCGGGCCGATCTCCTCAAATCCCACAAGCGTACCCACACAGGAGAAAGACCCTATAGTTGCAACGTCTGCAGTAAAACATACGCCCATCCCAGTCAGCTCAGGATACACAAACGTGTCCACACGGGAGAGAAGCCGTATTCCTGCTCGCACTGTGGGAAGCGCTTCAACGAGCACAACCAGCTCAAAGTCCACTTGCGGACACACACCGGGGAGAGGCCTTACAGCTGCCAGGAGTGCGGCAAAACTTTCAGCAATGCAGGCAACCTGCGTATACACGAGAGGATCCACACCGGTGAGAAGCCCTACTGCTGCGCTCAGTGCGGGAAACGGTTCAACGGCTTGGGTGACCTCAAAACACACTACAggattcacactggagagaggcCCTACAGCTGTGAGCTGTGTAAGAAGACCTTCAGCCAAGCGGGCCACCTCACCATACACATGCGGATGCACACGGGAGAAAGGCCGTACAGCTGCAACGAGTGCGGCAAGAAGTTCACGGTGGCCAGCAGCCTGAAACTGCACCAGAGGACTCACACCGGAGAGAAGGAGTACAGCTGCTCGTACTGCAGCAAGAGCTTCAGCAGGTCGGGTCACCTGAAGAGACACGAACTGGTGCACACCAAAGAGAAGGTCTTCCTCTGCAGCCAGTGTGGAAAGACCTACACTGACCAATCCTCCCTTAAAAAGCACCTGAAGATGCACGCCGCCAAGGAGCAGAAGGCTCAGAGCGAGGGAAGCACCAGCGAGGCGGAAACAAACCGCCCTTCAGCTTCGGAGACACTTTCAGAAATTAGAAGCCAAGTCTTAGAAGATGAGTAATATAAAAGCTGAGAATGAGTGCTGTATGTGATTTTACTAAATAATCTTAAATCAAGATCAACTGACTAGCTTTTTCAGAATCACATCTCACAGCCTACATAAGCAGGTATTACAGCTATAACTGTTGTGCAGTATTTTGGTGTCTAATAGTAATAAGCATTTAAATGCTTTGTATTAGTCTGTTAATCAAATTGGACTTCCTGGATCGTATTTTATCGCTTCTTTGGTAACTTAAACAAAACGCCACCACCAATCCAGCCCCCTGCACTGTTTTAATGCAGGGCTGTTGTGTGCTGtggttgaaagctccagaaaaagCTGTTAATCAGAGCTTGAGTTTAGATTATTATTGTCTTAACTGCTGTTCCTGAGTTCAAAACTGTAGTTGTCGTTGTGGTACAGTGCAATACACTGTTGTCTAGTCTTTGCTGTGATTTAGTAGTTCCATGACtgattgattattttttatcttgATTGATAAACTCTAATATTCATCTTGTCTTCTTTCTTGCAGCAGTGTAAAGAGACAGATAATgaacatttcattaaaagaaCAGTTGTTCTTTTAAACATGCTGTATGTTACCAAAATGTTGGTATTTTTGAAATGCTTTAAAGGAGGAGTTCAATGCAATGTCTGTCAGATTGTCAGGATGATTTCAACCGACCTGCTGAAGCAAGACACTGAAATCCAGGTTCAGGTTTCTCTTCTGTTGTCCTGACTTTTGACCTCCTTGAAAATAAAATTTCCCCACAGGGGTTAGtataacaacaataacataAAAACAGCAACATAAGTGTTTTAGAATTAAGATATTATGATGCTCATGTATACATGTCGTAGTAGTCAGAGGGTTAGAAATGTGTGCTGCACCAGTGACTTAAAGTGAAGATCATTCATATATTGCTGTATATAGCTTTAACTATACAGTCAGCAATCCATTAAACTGACACGAATGTATTTGTCTAGTAATGTTACTGAAAATAATGTTCCTGCAAATAATCTGTCTCGATTGAATAGTAAATAATTGTTTTGCTGATCTCAGAGAATGTGGAGCTTCTAGAGGATCCGTTTTAGGTCGTTCACTGTTGGAAACGCGTCTCTTACCATGAAATATGTACAACTAACACACAGGAGCAAAATGTCATGTTTATGATGAAAGAGCTACTGTTTTGTGTGGCAACTGGTTGGTATACCTGCACAGCAGTGTATATTAAACTGAGTGTTTGCTACTAGGACTTTATTGTGACTTACTTTTGTGTGGTTTGCGTCTAAATTAAAGAGAAAAGTTAACCAAAA
>XM_039779961.1
GTGCGACTGTCTCCTGCTTTTGTTTCTTCCGCACACGGCAGCACAGAGTCGCACAGCCACACACCCACTTTTTTCCAGATACTTTCAACCGTGTACAAACCATCTGGCGAGTTGTCCACAGTTGCAACCGCTCGGTCTAACATGGCCAAGTCGAGTGATCTCAAACTCTTCCTGGAGTCTTCTCTGAATGAGATATTTAAAGCCACAGTAAGCGACATCCTGGACTCAGTGGACCGGACCCTGTCTGAGTACCAGGGCACAATACACAGGATCGAGTCTGAAAACGAGGGCCTGAAGCGGCTGCTGTTTGCACAGAAAAGTACAGAGTCTGCTGCAAAAGatgTTCGTGAACAAGATGCCACTGAAAAGTCTTTCACTTCAGAATGGAACAGTCGTCTCGTCAGCTCCACCCAGGGCTCGTTCAAGATGTCCATATGCAGCAGTGACAAGAAGAGCTTCAGGAGGAAGCAGAAAGACAAGATGAGGGAGAGCATATCCCCTTCCTCCTTTTTACTGCAGACTGATCATATGGTAGAAAGACCATGTATGAACACAGCAGAGGTAGGTGTGTCAACCCCAAACTTGATATCTGTAAAAGCAGAGCCTGGCCTGGATGAAAGCGGTGCTATTGACCTCTCCCAGCCTCCATCCCTTCTCAATCTGACAATGAGGCCAATAAAAAATGAGAGCACAGAGGTCAGTTTTGACAGTCACGATGCATATGCGCCACTGCCGCCATCTACAGGCCTCAAACAAGAATCCAGAGGCAGTGACAGTGAAGTTAAAGTCACCATTGTTTCTGACACTTACATGCAGGATGGACAGTTCATtaagacagaggaagaggagcagagtGGCGTGCTGCAGTATGGTGACAATGACATTTTCTCTAAGCAAGAGTTGGACCATGCAATGAGATATTACCCTGAATCAGAAATAGATCCTGAGGCAACGAGCAGACAAGTTGTGGAGCCAGAAGTAATGGTGCAGGAGAAAAACGCTGCTGTTCCCGCAGATGGATTTTTGGAGATCCGTGACAACTTTCTCCGTTGTCCCACCTGTCCCAAAACATTTAGTCGAGCAGCCTCACTCAACATCCACATCAAGACACACAGCGCTGAAAAGGCGCACAGCTGCAGCTACTGTGGCAAACGCTTTGGCCGGGCCGATCTCCTCAAATCCCACAAGCGTACCCACACAGGAGAAAGACCCTATAGTTGCAACGTCTGCAGTAAAACATACGCCCATCCCAGTCAGCTCAGGATACACAAACGTGTCCACACGGGAGAGAAGCCGTATTCCTGCTCGCACTGTGGGAAGCGCTTCAACGAGCACAACCAGCTCAAAGTCCACTTGCGGACACACACCGGGGAGAGGCCTTACAGCTGCCAGGAGTGCGGCAAAACTTTCAGCAATGCAGGCAACCTGCGTATACACGAGAGGATCCACACCGGTGAGAAGCCCTACTGCTGCGCTCAGTGCGGGAAACGGTTCAACGGCTTGGGTGACCTCAAAACACACTACAggattcacactggagagaggcCCTACAGCTGTGAGCTGTGTAAGAAGACCTTCAGCCAAGCGGGCCACCTCACCATACACATGCGGATGCACACGGGAGAAAGGCCGTACAGCTGCAACGAGTGCGGCAAGAAGTTCACGGTGGCCAGCAGCCTGAAACTGCACCAGAGGACTCACACCGGAGAGAAGGAGTACAGCTGCTCGTACTGCAGCAAGAGCTTCAGCAGGTCGGGTCACCTGAAGAGACACGAACTGGTGCACACCAAAGAGAAGGTCTTCCTCTGCAGCCAGTGTGGAAAGACCTACACTGACCAATCCTCCCTTAAAAAGCACCTGAAGATGCACGCCGCCAAGGAGCAGAAGGCTCAGAGCGAGGGAAGCACCAGCGAGGCGGAAACAAACCGCCCTTCAGCTTCGGAGACACTTTCAGAAATTAGAAGCCAAGTCTTAGAAGATGAGTAATATAAAAGCTGAGAATGAGTGCTGTATGTGATTTTACTAAATAATCTTAAATCAAGATCAACTGACTAGCTTTTTCAGAATCACATCTCACAGCCTACATAAGCAGGTATTACAGCTATAACTGTTGTGCAGTATTTTGGTGTCTAATAGTAATAAGCATTTAAATGCTTTGTATTAGTCTGTTAATCAAATTGGACTTCCTGGATCGTATTTTATCGCTTCTTTGGTAACTTAAACAAAACGCCACCACCAATCCAGCCCCCTGCACTGTTTTAATGCAGGGCTGTTGTGTGCTGtggttgaaagctccagaaaaagCTGTTAATCAGAGCTTGAGTTTAGATTATTATTGTCTTAACTGCTGTTCCTGAGTTCAAAACTGTAGTTGTCGTTGTGGTACAGTGCAATACACTGTTGTCTAGTCTTTGCTGTGATTTAGTAGTTCCATGACtgattgattattttttatcttgATTGATAAACTCTAATATTCATCTTGTCTTCTTTCTTGCAGCAGTGTAAAGAGACAGATAATgaacatttcattaaaagaaCAGTTGTTCTTTTAAACATGCTGTATGTTACCAAAATGTTGGTATTTTTGAAATGCTTTAAAGGAGGAGTTCAATGCAATGTCTGTCAGATTGTCAGGATGATTTCAACCGACCTGCTGAAGCAAGACACTGAAATCCAGGTTCAGGTTTCTCTTCTGTTGTCCTGACTTTTGACCTCCTTGAAAATAAAATTTCCCCACAGGGGTTAGtataacaacaataacataAAAACAGCAACATAAGTGTTTTAGAATTAAGATATTATGATGCTCATGTATACATGTCGTAGTAGTCAGAGGGTTAGAAATGTGTGCTGCACCAGTGACTTAAAGTGAAGATCATTCATATATTGCTGTATATAGCTTTAACTATACAGTCAGCAATCCATTAAACTGACACGAATGTATTTGTCTAGTAATGTTACTGAAAATAATGTTCCTGCAAATAATCTGTCTCGATTGAATAGTAAATAATTGTTTTGCTGATCTCAGAGAATGTGGAGCTTCTAGAGGATCCGTTTTAGGTCGTTCACTGTTGGAAACGCGTCTCTTACCATGAAATATGTACAACTAACACACAGGAGCAAAATGTCATGTTTATGATGAAAGAGCTACTGTTTTGTGTGGCAACTGGTTGGTATACCTGCACAGCAGTGTATATTAAACTGAGTGTTTGCTACTAGGACTTTATTGTGACTTACTTTTGTGTGGTTTGCGTCTAAATTAAAGAGAAAAGTTAACCAAAA
>XM_039779962.1
TTAAAAACAAGCCTGTGCAAACGTTTATGAGGTAGAAAATAGGCACTGGTTTCAGTGATCCTGTGTAATACAGTGCTAATTACACTGTAGTACATTACTGTCACAGTGTCCTGCCCATACTGATGatgTTCGTGAACAAGATGCCACTGAAAAGTCTTTCACTTCAGAATGGAACAGTCGTCTCGTCAGCTCCACCCAGGGCTCGTTCAAGATGTCCATATGCAGCAGTGACAAGAAGAGCTTCAGGAGGAAGCAGAAAGACAAGATGAGGGAGAGCATATCCCCTTCCTCCTTTTTACTGCAGACTGATCATATGGTAGAAAGACCATGTATGAACACAGCAGAGGTAGGTGTGTCAACCCCAAACTTGATATCTGTAAAAGCAGAGCCTGGCCTGGATGAAAGCGGTGCTATTGACCTCTCCCAGCCTCCATCCCTTCTCAATCTGACAATGAGGCCAATAAAAAATGAGAGCACAGAGGTCAGTTTTGACAGTCACGATGCATATGCGCCACTGCCGCCATCTACAGGCCTCAAACAAGAATCCAGAGGCAGTGACAGTGAAGTTAAAGTCACCATTGTTTCTGACACTTACATGCAGGATGGACAGTTCATtaagacagaggaagaggagcagagtGGCGTGCTGCAGTATGGTGACAATGACATTTTCTCTAAGCAAGAGTTGGACCATGCAATGAGATATTACCCTGAATCAGAAATAGATCCTGAGGCAACGAGCAGACAAGTTGTGGAGCCAGAAGTAATGGTGCAGGAGAAAAACGCTGCTGTTCCCGCAGATGGATTTTTGGAGATCCGTGACAACTTTCTCCGTTGTCCCACCTGTCCCAAAACATTTAGTCGAGCAGCCTCACTCAACATCCACATCAAGACACACAGCGCTGAAAAGGCGCACAGCTGCAGCTACTGTGGCAAACGCTTTGGCCGGGCCGATCTCCTCAAATCCCACAAGCGTACCCACACAGGAGAAAGACCCTATAGTTGCAACGTCTGCAGTAAAACATACGCCCATCCCAGTCAGCTCAGGATACACAAACGTGTCCACACGGGAGAGAAGCCGTATTCCTGCTCGCACTGTGGGAAGCGCTTCAACGAGCACAACCAGCTCAAAGTCCACTTGCGGACACACACCGGGGAGAGGCCTTACAGCTGCCAGGAGTGCGGCAAAACTTTCAGCAATGCAGGCAACCTGCGTATACACGAGAGGATCCACACCGGTGAGAAGCCCTACTGCTGCGCTCAGTGCGGGAAACGGTTCAACGGCTTGGGTGACCTCAAAACACACTACAggattcacactggagagaggcCCTACAGCTGTGAGCTGTGTAAGAAGACCTTCAGCCAAGCGGGCCACCTCACCATACACATGCGGATGCACACGGGAGAAAGGCCGTACAGCTGCAACGAGTGCGGCAAGAAGTTCACGGTGGCCAGCAGCCTGAAACTGCACCAGAGGACTCACACCGGAGAGAAGGAGTACAGCTGCTCGTACTGCAGCAAGAGCTTCAGCAGGTCGGGTCACCTGAAGAGACACGAACTGGTGCACACCAAAGAGAAGGTCTTCCTCTGCAGCCAGTGTGGAAAGACCTACACTGACCAATCCTCCCTTAAAAAGCACCTGAAGATGCACGCCGCCAAGGAGCAGAAGGCTCAGAGCGAGGGAAGCACCAGCGAGGCGGAAACAAACCGCCCTTCAGCTTCGGAGACACTTTCAGAAATTAGAAGCCAAGTCTTAGAAGATGAGTAATATAAAAGCTGAGAATGAGTGCTGTATGTGATTTTACTAAATAATCTTAAATCAAGATCAACTGACTAGCTTTTTCAGAATCACATCTCACAGCCTACATAAGCAGGTATTACAGCTATAACTGTTGTGCAGTATTTTGGTGTCTAATAGTAATAAGCATTTAAATGCTTTGTATTAGTCTGTTAATCAAATTGGACTTCCTGGATCGTATTTTATCGCTTCTTTGGTAACTTAAACAAAACGCCACCACCAATCCAGCCCCCTGCACTGTTTTAATGCAGGGCTGTTGTGTGCTGtggttgaaagctccagaaaaagCTGTTAATCAGAGCTTGAGTTTAGATTATTATTGTCTTAACTGCTGTTCCTGAGTTCAAAACTGTAGTTGTCGTTGTGGTACAGTGCAATACACTGTTGTCTAGTCTTTGCTGTGATTTAGTAGTTCCATGACtgattgattattttttatcttgATTGATAAACTCTAATATTCATCTTGTCTTCTTTCTTGCAGCAGTGTAAAGAGACAGATAATgaacatttcattaaaagaaCAGTTGTTCTTTTAAACATGCTGTATGTTACCAAAATGTTGGTATTTTTGAAATGCTTTAAAGGAGGAGTTCAATGCAATGTCTGTCAGATTGTCAGGATGATTTCAACCGACCTGCTGAAGCAAGACACTGAAATCCAGGTTCAGGTTTCTCTTCTGTTGTCCTGACTTTTGACCTCCTTGAAAATAAAATTTCCCCACAGGGGTTAGtataacaacaataacataAAAACAGCAACATAAGTGTTTTAGAATTAAGATATTATGATGCTCATGTATACATGTCGTAGTAGTCAGAGGGTTAGAAATGTGTGCTGCACCAGTGACTTAAAGTGAAGATCATTCATATATTGCTGTATATAGCTTTAACTATACAGTCAGCAATCCATTAAACTGACACGAATGTATTTGTCTAGTAATGTTACTGAAAATAATGTTCCTGCAAATAATCTGTCTCGATTGAATAGTAAATAATTGTTTTGCTGATCTCAGAGAATGTGGAGCTTCTAGAGGATCCGTTTTAGGTCGTTCACTGTTGGAAACGCGTCTCTTACCATGAAATATGTACAACTAACACACAGGAGCAAAATGTCATGTTTATGATGAAAGAGCTACTGTTTTGTGTGGCAACTGGTTGGTATACCTGCACAGCAGTGTATATTAAACTGAGTGTTTGCTACTAGGACTTTATTGTGACTTACTTTTGTGTGGTTTGCGTCTAAATTAAAGAGAAAAGTTAACCAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779960.1 True 3322 mRNA 0.45 3 19963771 19970112
XM_039779961.1 False 3285 mRNA 0.45 2 19963772 19970112
XM_039779962.1 False 3070 mRNA 0.44 2 19964300 19970112

Neighbor

gene id symbol gene type direction distance location
pax8 pax8,LOC102780591 coding upstream 19928 19929571 ~ 19943843 (+)
lman2la lman2l,LOC108231067 coding upstream 63511 19894116 ~ 19900260 (+)
ddx54 NA coding upstream 438447 19516810 ~ 19525324 (+)
trnac-gca_32 NA coding upstream 446465 19517235 ~ 19517306 (+)
abl1 abl1 coding upstream 477665 19449563 ~ 19486106 (+)
bspry bspry,LOC100703027,LOC102783296 coding downstream 50845 20020957 ~ 20028430 (+)
traf2b traf2 coding downstream 67752 20037864 ~ 20050223 (+)
bbln clg14h9orf16,LOC103376136,LOC106518230,LOC103028983 coding downstream 197815 20167927 ~ 20170745 (+)
dnm1a dnm1 coding downstream 211633 20181745 ~ 20236007 (+)
hspa5 hspa5 coding downstream 292663 20262775 ~ 20266809 (+)
G176289 NA non-coding upstream 57648 19883987 ~ 19906123 (+)
G176292 mtfp1 non-coding upstream 70992 19888869 ~ 19892779 (+)
G176287 NA non-coding upstream 94224 19867818 ~ 19869547 (+)
G176286 med13l non-coding upstream 113866 19849690 ~ 19849905 (+)
G176284 NA non-coding upstream 158156 19805199 ~ 19805615 (+)
G176346 fbxw5 non-coding downstream 85177 20055289 ~ 20061984 (+)
LOC120544937 NA non-coding downstream 98648 20068760 ~ 20069830 (+)
G176335 LOC103376127 non-coding downstream 109739 20079851 ~ 20087641 (+)
G176357 fubp3,LOC106522831 non-coding downstream 118994 20089106 ~ 20090858 (+)
G176410 NA non-coding downstream 267415 20237527 ~ 20241216 (+)
LOC120545241 LOC105930800,LOC102780299,LOC103149678,LOC107095870,LOC100701678 other upstream 49091 19911836 ~ 19914680 (+)
LOC120545529 ermp1,LOC102800265 other upstream 561392 19380250 ~ 19402379 (+)
srsf9 srsf9,LOC104958899,LOC100707309 other upstream 1239986 18676021 ~ 18723785 (+)
LOC120545610 NA other upstream 1306152 18656524 ~ 18657619 (+)
cabp7b cabp7,LOC104925332 other upstream 1312702 18635026 ~ 18651069 (+)
pappaa pappa other downstream 545235 20515347 ~ 20620786 (+)
G176526 NA other downstream 976572 20946684 ~ 20947055 (+)
G176753 NA other downstream 2308768 22278880 ~ 22282163 (+)
LOC120545252 NA other downstream 2526301 22496413 ~ 22524405 (+)
G176870 cplx4 other downstream 2561796 22531908 ~ 22537337 (+)

Expression


Co-expression Network