LOC120545567 (LOC102210433,LOC104924646,LOC102792360,LOC100707569,LOC104958897)


Basic Information

Item Value
gene id LOC120545567
gene name LOC102210433,LOC104924646,LOC102792360,LOC100707569,LOC104958897
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 18723885 ~ 18726384 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780031.1
GAAGGACGAAAGCGATAGGGGCTGGTGGTGCTTCCCCACCCATCTGACAAGAAAAAGAGTTCCGGGTTCTTTTCAGCCGAAAGCTGCTCGCGATTGCCGTTTTATCACGGCGCTCACACGGCGGGGATCATGTCTCTTTTACTGGATAACCAATTCATAGAGCTGCCTCCTGACAAGGCGATAAACACAAAGTTGTTCCTGGATGCTGTGTCTCATATTCCTTCATTTTTTGaCTGCTTGGGATCAAACGTATTTTCTGTGATCAAATCAGACATTAATGGCAATATAATGAAAATTAAAGCAGTGTATCTTAAGGATCCTGCGAAGTATGTCTACCTGCAGGACATTGTGCAGGCAGAGCGTGAAGCCCATGCAGCAGAATGGCCTAAAGTTGGAGCAACATTAGCTCTGATGTGGCTGAAAAGGGGTCTCCGTTTCATACAAATCCTGCTCCAGAGTTTGGcagatggagaaagagatgaAAACAACCCCAACCTAATTCGGGTTAATGTCACCAAAGCCTATGAACAGGCGCTGAAGAAATACCACGGCTGGATTGTTCAAAAGATTTTCCATGTAGCATTACTTGCAGCGCCCTACAAATCAAACTTCCTCAAGGCTCTGTCGAAAGGAGAGGAAGTGAAAGAGGAGGACTGTCTGATAAATGTGCGCCAGTTCCTAGTTAATTACACGGCCACTGTAGATGCCATCTACGAGATGTACACAAATCTGAACGCAGAGCTGGACTACACGGTTTGATGTCCTGGGACATCTGTCATACCTCTCAGGTGTCAGACAAGTCCAGTTTCCAAAGGTGTTTTTAATAGGATTGTTTATAGGATAGGTAAATAGGATTTGTTTTACTAAATAttactactgtatatctggTTTTTAATATGATGAAAATGTCTTGATTCAAACCATTATAGCAGGAGGTTATGTGTTTGTTCTTGTATAtaatttgcatttgcatttaaTTGCAGCATGAGTGCAGCTCTCACTCTTCTGCAGAATGATGTTATTGTGTGTGAGTTGCTGCTTTATTTATAACATTAACAGGTGGCTTTTCACTTGTTCCATCAAGAGACGAATACAAGACTGTAAACAGTGTTGACAGTAACACTGTTATCACAGGGAACCACTTCTGTTAATGCCTCACATTCAGATGTCCTCTGCCTCTTGAGCCTTGGAGTTACGAtttcaagtcaaatttaagtcattttaaattttaacaGCCCATTTCATGTGCATTAATCCACTTGTGCCTTGGTGTTTCTGTACAAAAACACATGTTTTCAAGCTCAGAATCAATATGTTTGCAATTCTATTTTACCTACAAAGCAAAAGTTAGCAGAGCCAGAACAATTTTTCTTCTGAGAGCTTAACCTGTGTTGGTTGTCTGTGTTGAGTTTGAAGGTGTGGTCGACTTCTTTGTTTGCGTGTACTCTTCTGTGGCCTATTTTGTTCCTATTTCTCAATTGACCGATCTTCTTTTACACAAACATAATGTCAAACAATGTTTTTCCTGTCAGCAGACATCATGTGCCCATTTATTAATAACGTAATTTATTAGATCTGCATTTTCTGAATGAATACTTCTAGATgggctgtttgttttttggattATGAACTATGATCAAATTTGTTCTTATCACAAGATCTTAATGTgtgactgaaaataaaaaaaataggtgACACTA

Function

NR:

description
PREDICTED: glycolipid transfer protein-like

GO:

id name namespace
GO:0043547 positive regulation of GTPase activity biological_process
GO:0046836 glycolipid transport biological_process
GO:0005737 cytoplasm cellular_component
GO:0017089 glycolipid transfer activity molecular_function
GO:0008270 zinc ion binding molecular_function
GO:0051861 glycolipid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780031.1 True 1700 mRNA 0.40 5 18723885 18726384

Neighbor

gene id symbol gene type direction distance location
git2b LOC103360644 coding upstream 628 18704773 ~ 18723257 (+)
m17 NA coding upstream 148751 18573664 ~ 18575134 (+)
taok3b LOC104958930,LOC103360656 coding upstream 152837 18562440 ~ 18571048 (+)
LOC120546055 LOC103360654,LOC104934677,LOC104958911 coding upstream 163452 18558560 ~ 18560433 (+)
LOC120546054 susd2 coding upstream 166425 18548787 ~ 18557460 (+)
cplane1 NA coding downstream 25660 18752044 ~ 18772197 (+)
LOC120545005 wdr70 coding downstream 46256 18772640 ~ 18834666 (+)
opn4xa LOC103360637 coding downstream 132884 18859268 ~ 18864887 (+)
pdlim5b LOC104950678,LOC102795075,LOC100697721 coding downstream 141969 18868353 ~ 18905862 (+)
bmpr1bb bmpr1b,LOC102795848,LOC101481773,LOC102310602 coding downstream 180358 18906742 ~ 18966325 (+)
G175925 LOC103360647,LOC104958910,LOC102220109 non-coding upstream 49920 18670383 ~ 18673965 (+)
G175917 NA non-coding upstream 65601 18657690 ~ 18658284 (+)
G175891 NA non-coding upstream 135592 18587759 ~ 18588293 (+)
G175804 rnf185 non-coding upstream 257821 18464270 ~ 18466064 (+)
G175797 NA non-coding upstream 272817 18449802 ~ 18451068 (+)
G175974 NA non-coding downstream 109791 18836175 ~ 18836754 (+)
G175973 NA non-coding downstream 124694 18851078 ~ 18854548 (+)
G176173 LOC104959907,LOC106527788,LOC107745368,LOC106563285 non-coding downstream 761926 19488310 ~ 19492082 (+)
G176177 NA non-coding downstream 769652 19496036 ~ 19502184 (+)
G176225 LOC104956387,LOC101069739 non-coding downstream 836862 19563246 ~ 19565919 (+)
srsf9 srsf9,LOC104958899,LOC100707309 other upstream 100 18676021 ~ 18723785 (+)
LOC120545610 NA other upstream 66266 18656524 ~ 18657619 (+)
cabp7b cabp7,LOC104925332 other upstream 72816 18635026 ~ 18651069 (+)
myo1hb LOC103374943,LOC101465300,LOC102786650 other upstream 175744 18536631 ~ 18548141 (+)
tmem120b tmem120b,LOC101471304,LOC102195879 other upstream 323439 18391739 ~ 18400446 (+)
LOC120545529 ermp1,LOC102800265 other downstream 653866 19380250 ~ 19402379 (+)
LOC120545241 LOC105930800,LOC102780299,LOC103149678,LOC107095870,LOC100701678 other downstream 1185452 19911836 ~ 19914680 (+)
pappaa pappa other downstream 1788963 20515347 ~ 20620786 (+)
G176526 NA other downstream 2220300 20946684 ~ 20947055 (+)
G176753 NA other downstream 3552496 22278880 ~ 22282163 (+)

Expression


Co-expression Network