slc12a2


Basic Information

Item Value
gene id slc12a2
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 752412 ~ 846977 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780105.1
atgtcAGCGACTTCCTCCACAACGTCTGCTCCGACAGAGAATGCCGCTCCGGAAAATGATTTTCTAGCTGCAGATGGTGGGCTGAAGCCGCCCGGTCCGACGCCCAGCCAGAGCCGGTTCCAGGTGGACCTTGTGGCTGAGGCAGCGGGCGCCAATGAAGACAAGTCTCCTAGCTCCGACGCCTCCACCACTGTCCCATCCAGCGATAAGGCCACTCCCGTCGCTCCTCCGGAGGCTCTGAGTGCTGATCCAGGTGTCGGCGGAGAGGAAGCCAAAGGCCGGTTTCGGGTGGTGAATTTCGCGGATCCGAGCGCAGCGGGGAGCGCGGCCTCTCCCGAGGCGCCGCCGGCTGAGAGCCTGCAGAACGGGGACACGGTGATGAGCGAGACCAGCTTGCATTCGTCCACAGGAGGCCAGCATCACTATCACTATGACACCCACACCAACACCTATTACCTGAGGACTTTTGGCCACAACACCATCGATGCCGTGCCCAACATAGATTTTTATCGACAGACATCAGCGCCGCTGGGGGAGAAACTGATCAGACCCACCCTGTCGGAGCTGCACGACGAGTTGGACAAGGAGCCATTTGAGGATGGCTTCGCCAACGGGGACGAGCTGACCCCGGCCGAGGAGGCTGCTAATAAAGAAGCAGCCGAGTCCAAAGGAGTGGTCAAGTTTGGCTGGATCAAAGGGGTGCTGGTCCGCTGCATGTTGAACATCTGGGGTGTGATGCTCTTCATCCGCATGTCCTGGATCGTGGGTCAGGCTGGAATTGCTCTCTCCTGTCTGATCGTTGCCATGGCTACTGTAGTGACGACCATCACCGGCCTCTCCACTTCTGCCATTGCCACCAACGGATTTGTGCGAGGAGGTGGAGCGTATTACTTGATTTCGAGGAGTCTGGGCCCAGAGTTCGGAGGCTCCATTGGGCTGATCTTTGCTTTCGCCAATGCAGTGGCTGTAGCCATGTATGTGGTGGGCTTTGCTGAAACTGTTGTGGAACTTCTTGCTGGTGTAGATCTCATAATGATGGATCAAATCAACGATATTCGCATCATCGGCACCATCACGGTCATCCTCCTGCTGGGCATCTCTGTGGCAGGAATGGAATGGGAGGCCAAGGCCCAGATATTTTTGCTCGTTGTCCTCGTCACAGCCATCTTCAACTACTTCATCGGAACCTTCATTCCTGTCCAGGCCAAGGAATCTGTGGGCTTCTTTGGCTACAACGGTTTGATCATGTGGGAAAACATGGGTCCTGACTTCCGAGGTGAGACCTTCTTCTCAGTCTTCTCCATCTTCTTCCCTGCAGCCACTGGTATTCTGGCCGGAGCCAACATTTCAGGAGACCTTGCTGACCCACAGCTGGCCATCCCCAGAGGAACCCTGCTGGCCATATTGATCACAGGAATAGTCTACCTGGGTGTTGCCGTTTCCACAGGCTCTTGTATTGTGAGAGACGCCAGTGGCAATGTGAATGACACAGTCAGTTCTCAGTTCATGATGAACTGCACAGAAGCTGCCTGCAAATTCGGCTATGATTTCTCGACGTGCAGGGGCACAGAAAAGGGCTGCCCCTATGGACTCCATAATGACTTCCAGGTGATGAGCATGGTTTCTGGGTTTGGGCCCGTCATCACTGCTGGAATCTTCTCTGCCACTCTGTCCTCTGCGCTGGCCTCTTTAGTCAGTGCACCCAAAGTTTTTCAGGCTTTATGTAAGGACAACATCTACCCCGGCCTGGGCATGTTCGCCAAAGGCTACGGCAAGAACAACGAGCCCCTCCGCGGCTACATTCTGACCTTTGTGATCGCCCTGGCCTTCATCCTCATCGCTAAGCTGAACATAATTGCCCCCATCATCTCCAACTTTTTCTTGGCGTCCTATGCCTTGATCAACTTTTCTGTGTTCCATGCCTCCCTGGCTAACTCACCAGGGTGGCGACCCAGCTTCAAATACTACAACATGTGGGTTTCTCTGGCTGGAGCCGTGCTGTGCTGTGGGGTGATGTTTGTCATCAACTGGTGGGCCGCGCTCCTCACCAACGCCATTGTTCTGGGCCTTTTTATCTACGTCAGCTACAAGAAGCCAGATGTGAACTGGGGCTCGTCGACCCAGGCTCTGACCTACCACCAGGCCCTGACCCACACTCTGCACCTCAGCGGCGTGGAGGACCACATCAAGAACTTCAGACCCCAGTGCTTGGTGATGACAGGTTACCCCAACTCTCGGCCAGCTCTCCTGGATCTGGTCAACAGCTTCACCAAGAACGTTGGCCTGATGATCTGTGGTCATATTCGCACGggctaCAGACGGCCAAACTTCAAAGACCTGAGCACGGACCAGGCCCGGTACCAGCGCTGGCTGCTGAAGAATGAAACCAAGGCCTTCTACACGCCGGTGTATGCCGAGGACATGAGGCAGGGGACACAGTACCTGCTGCAGGCTGCCGGCCTGGGTCGCCTCAAGCCCAACACCCTGGTGCTGGGCTTCAAGAACGACTGGAGGGACGGCGACATGATGAACGTGGAGACTTACATCAGCATGATCCAcGATTCCTTTGACTTCCAGTTTGGTGCTGTTATTCTGCGACTCAAAGAGGGACTGGATGTGTCTCATATCCAAGGACAAGATGACTTGCTGTCCTCCCAGGAGAAGTCCTCTGGGATGAAAGATGTGATAGTGTCCATAGACACCAGCAAAGACTCTGACGCAGATTCCTCCAAGCTGTCGTCTAAGGCCACCAGCCTCCAGAACAGTCCGGCTGTGCACAAAGATGACGACGATGATGGCAAAGCTACGACTCAGCCCCTGTTGAGAAAAGAAAAGAGGAGCCCGACTCTGCCACTGAATGGGTCAGACCAGAGGCTGCTGGAGGCCAGCCAGCAGTTCCAGAAGAAACAAGGGAAGGGCACAGTGGACGTCTGGTGGCTGTTTGATGACGGAGGTCTGACCCTGCTCATCCCCTACCTGCTGACCAAcaagaagaggtggaaggacTGCAAGATCCGGGTCTTCATCGGAGGCAAGATCAACAGGATCGATCACGACCGCAGAGCgatGGCCACTCTGCTCAGCAAGTTCAGGATAGACTTCTCGGACATCAACGTGTTGGGAGACATCAACACCAAGCCTAAGAAGGAGCACGTGTTGGCCTTTGAGGAGATGATCGAGCCGTATCGGCTGAAGGAAGACGACATGGAGCAGGATGCGGCGGAGGCGCTGAAGGAGAGCGAGCCCTGGAGGATCACCGACAACGAGCTGGAGCTGTACCGCGCCAAGACTAATCGTCAGATCAGACTCAACGAGCTTCTGAAGGAGCACTCAAGCACAGCCAACCTCATCGTCATGAGTCTGCCGCTGGCCAGGAAGGGCGCTGTGTCCAGCGCTCTGTACATGGCCTGGCTGGAGGCCTTGTCCCGGGACCTGCCTCCCATCCTCCTGGTGCGCGGAAACCACCAGAGTGTCCTCACCTTCTACTCTTAAACACACACGGAGAACAAAACAAATCCACCTTTTTAAAGTCTCACATCCAGAGCCACATCCCAGTTCCAGTCCGAAGCTACTGGTgcaccacacacactccagaGACACTGATGGAAACAATGCCGCTAATATGAATGAAGATGAAGGAAGTGAGACTGGTCGAGTAGTATGTGTAGAAGCCCTAAAGGTGATGGAGGAATGTCAGGGTTGCCCACTCTGCTCCTTTCTCTCTATTTATTCCAAGATGTCTGGGCTTTGCTCTTGTAGCTTTAGTTTCTTCTAATTTCCTCATGAAACTTTCATTTTTGTCAAGTTGATTTCTCTCAGGCTCCAAAGCAGTCGTGCACCATGTTCACGTTGTTCTCATGATATGGAATATCCTGATGTCATACTTGTTAAGTTAATTGGACCAGTTGTTTTGTTCGTGATGCAGCAATAATCACCCTGTTATTCCTAAATGTTGGGAGAGAACCATGCAGAATGCTTTGCAACACCTTCTAAAGCCTTATGGATGTGCCTTCCAGTTGAATCagataaaataattataatctCTATCCAGATTGACAATATTACCTATTATATTAGTGGATAATAGTTAGCTTTATTGAGTTTTAAATGTAATTCCTTCTTAGATGGAGCATTGTATTTATTCGAGTGGATTGCTTGTATTTAATGAAGGGTGTCCACTTGATTGCATGAAGACTTTCTCtgtcatttctttctcttttaccCTAATCGATATGTTTATTTTGGACcattgcctttttattttttattcacttttgagtcttccttttttaagcTGTTGAATATTTACGATAGCCTCAGCTACGCGACACAagacacatttagtttttaGGCCCAGTGCCTAAAAGTGTTTTTATGGTTCTTGTTTTGTTAGAAAAGATGTGAAGCTAGTTTTCCATTAGCCTTGTCCCATGTAGCTGCTGATGACTAAATGAAGTTTTTCAACAacgtttgtgtttctgtgtccacATGTCCCGTTCTTCCCCTGAAGAGAAACTGCTCCACCCAACGAGCTAGCTGAAACCTTGCCTTAATGCTAGAACTAACGATTGTCAAAAGTTCCTTCTCTCTTATAAGCCATACTGGCTGGGTGGTTTCTGGGTAAATGCAGATAGCAATCCATTGGTTCCATGTTCTGTTTCAACACaatttactgtatatgcatCTTCATTTTTCTTCCAATAGTCCACCTGCATCAGTCTGTTCCGTTGCTTACTGTAGGCCTGCATGTTGCTGGGGAAGTAGAGTTAGTGGCCCAGTAGACTGGCTGCTTGTTAGACCGCTGGTCTCCATTCCTACGCAGCCTAGATGGACCGAGAGAGTGAAGGACACAAGCTTCACGCTGAAAGACTTGCTGGCAGGAAGAATGTGACATTAGTGTTGAGGCTGAGTGAAGAAATACCTCTATGCATATGAGCTTGTGTTGCGTAGGTACGTGTAATAAAAGTCCATGTGAAAGGAA
>XM_039780106.1
AATAGCAGCGAGGGCAGCAGCGGGAGTCTAGGAGAAGGTGCAGCAAGGTCGACAACAGCATCCTGCCCGGAACGACACAAAGACCGGAGGTGGACGGGATTTAGTCCAGTGGTCGAGCGAGTGAAAGTTACCGGGGATATTTGGGATTTACTGCCgcgaaagaagaagaaggagagtgGCCGAAAGTTTCCAGactgtagcctcattttccgaGGCAGCTAACGAGCTATCGTCCCCGCTCTCCCCTCGTCTCGGAGCTGCGGGCAGAGCAGCGTGTTCTCCCCTGAAATTAGGAAGGCAGTTGTCCGTTTGTAACGGGGCGGCTCCCGGGCTTCCACACTTCCTCCAGTTAGTTTGTGGGCCATAACGTGGTTCTTCCCCACACTGTTTTAAcgtacatttgttttttttgtgtgtgtgccatgtcAGCGACTTCCTCCACAACGTCTGCTCCGACAGAGAATGCCGCTCCGGAAAATGATTTTCTAGCTGCAGATGGTGGGCTGAAGCCGCCCGGTCCGACGCCCAGCCAGAGCCGGTTCCAGGTGGACCTTGTGGCTGAGGCAGCGGGCGCCAATGAAGACAAGTCTCCTAGCTCCGACGCCTCCACCACTGTCCCATCCAGCGATAAGGCCACTCCCGTCGCTCCTCCGGAGGCTCTGAGTGCTGATCCAGGTGTCGGCGGAGAGGAAGCCAAAGGCCGGTTTCGGGTGGTGAATTTCGCGGATCCGAGCGCAGCGGGGAGCGCGGCCTCTCCCGAGGCGCCGCCGGCTGAGAGCCTGCAGAACGGGGACACGGTGATGAGCGAGACCAGCTTGCATTCGTCCACAGGAGGCCAGCATCACTATCACTATGACACCCACACCAACACCTATTACCTGAGGACTTTTGGCCACAACACCATCGATGCCGTGCCCAACATAGATTTTTATCGACAGACATCAGCGCCGCTGGGGGAGAAACTGATCAGACCCACCCTGTCGGAGCTGCACGACGAGTTGGACAAGGAGCCATTTGAGGATGGCTTCGCCAACGGGGACGAGCTGACCCCGGCCGAGGAGGCTGCTAATAAAGAAGCAGCCGAGTCCAAAGGAGTGGTCAAGTTTGGCTGGATCAAAGGGGTGCTGGTCCGCTGCATGTTGAACATCTGGGGTGTGATGCTCTTCATCCGCATGTCCTGGATCGTGGGTCAGGCTGGAATTGCTCTCTCCTGTCTGATCGTTGCCATGGCTACTGTAGTGACGACCATCACCGGCCTCTCCACTTCTGCCATTGCCACCAACGGATTTGTGCGAGGAGGTGGAGCGTATTACTTGATTTCGAGGAGTCTGGGCCCAGAGTTCGGAGGCTCCATTGGGCTGATCTTTGCTTTCGCCAATGCAGTGGCTGTAGCCATGTATGTGGTGGGCTTTGCTGAAACTGTTGTGGAACTTCTTGCTGGTGTAGATCTCATAATGATGGATCAAATCAACGATATTCGCATCATCGGCACCATCACGGTCATCCTCCTGCTGGGCATCTCTGTGGCAGGAATGGAATGGGAGGCCAAGGCCCAGATATTTTTGCTCGTTGTCCTCGTCACAGCCATCTTCAACTACTTCATCGGAACCTTCATTCCTGTCCAGGCCAAGGAATCTGTGGGCTTCTTTGGCTACAACGGTTTGATCATGTGGGAAAACATGGGTCCTGACTTCCGAGGTGAGACCTTCTTCTCAGTCTTCTCCATCTTCTTCCCTGCAGCCACTGGTATTCTGGCCGGAGCCAACATTTCAGGAGACCTTGCTGACCCACAGCTGGCCATCCCCAGAGGAACCCTGCTGGCCATATTGATCACAGGAATAGTCTACCTGGGTGTTGCCGTTTCCACAGGCTCTTGTATTGTGAGAGACGCCAGTGGCAATGTGAATGACACAGTCAGTTCTCAGTTCATGATGAACTGCACAGAAGCTGCCTGCAAATTCGGCTATGATTTCTCGACGTGCAGGGGCACAGAAAAGGGCTGCCCCTATGGACTCCATAATGACTTCCAGGTGATGAGCATGGTTTCTGGGTTTGGGCCCGTCATCACTGCTGGAATCTTCTCTGCCACTCTGTCCTCTGCGCTGGCCTCTTTAGTCAGTGCACCCAAAGTTTTTCAGGCTTTATGTAAGGACAACATCTACCCCGGCCTGGGCATGTTCGCCAAAGGCTACGGCAAGAACAACGAGCCCCTCCGCGGCTACATTCTGACCTTTGTGATCGCCCTGGCCTTCATCCTCATCGCTAAGCTGAACATAATTGCCCCCATCATCTCCAACTTTTTCTTGGCGTCCTATGCCTTGATCAACTTTTCTGTGTTCCATGCCTCCCTGGCTAACTCACCAGGGTGGCGACCCAGCTTCAAATACTACAACATGTGGGTTTCTCTGGCTGGAGCCGTGCTGTGCTGTGGGGTGATGTTTGTCATCAACTGGTGGGCCGCGCTCCTCACCAACGCCATTGTTCTGGGCCTTTTTATCTACGTCAGCTACAAGAAGCCAGATGTGAACTGGGGCTCGTCGACCCAGGCTCTGACCTACCACCAGGCCCTGACCCACACTCTGCACCTCAGCGGCGTGGAGGACCACATCAAGAACTTCAGACCCCAGTGCTTGGTGATGACAGGTTACCCCAACTCTCGGCCAGCTCTCCTGGATCTGGTCAACAGCTTCACCAAGAACGTTGGCCTGATGATCTGTGGTCATATTCGCACGggctaCAGACGGCCAAACTTCAAAGACCTGAGCACGGACCAGGCCCGGTACCAGCGCTGGCTGCTGAAGAATGAAACCAAGGCCTTCTACACGCCGGTGTATGCCGAGGACATGAGGCAGGGGACACAGTACCTGCTGCAGGCTGCCGGCCTGGGTCGCCTCAAGCCCAACACCCTGGTGCTGGGCTTCAAGAACGACTGGAGGGACGGCGACATGATGAACGTGGAGACTTACATCAGCATGATCCAcGATTCCTTTGACTTCCAGTTTGGTGCTGTTATTCTGCGACTCAAAGAGGGACTGGATGTGTCTCATATCCAAGGACAAGATGACTTGCTGTCCTCCCAGGAGAAGTCCTCTGGGATGAAAGATGTGATAGTGTCCATAGACACCAGCAAAGACTCTGACGCAGATTCCTCCAAGCTGTCGTCTAAGGCCACCAGCCTCCAGAACAGTCCGGCTGTGCACAAAGAAAAGAGGAGCCCGACTCTGCCACTGAATGGGTCAGACCAGAGGCTGCTGGAGGCCAGCCAGCAGTTCCAGAAGAAACAAGGGAAGGGCACAGTGGACGTCTGGTGGCTGTTTGATGACGGAGGTCTGACCCTGCTCATCCCCTACCTGCTGACCAAcaagaagaggtggaaggacTGCAAGATCCGGGTCTTCATCGGAGGCAAGATCAACAGGATCGATCACGACCGCAGAGCgatGGCCACTCTGCTCAGCAAGTTCAGGATAGACTTCTCGGACATCAACGTGTTGGGAGACATCAACACCAAGCCTAAGAAGGAGCACGTGTTGGCCTTTGAGGAGATGATCGAGCCGTATCGGCTGAAGGAAGACGACATGGAGCAGGATGCGGCGGAGGCGCTGAAGGAGAGCGAGCCCTGGAGGATCACCGACAACGAGCTGGAGCTGTACCGCGCCAAGACTAATCGTCAGATCAGACTCAACGAGCTTCTGAAGGAGCACTCAAGCACAGCCAACCTCATCGTCATGAGTCTGCCGCTGGCCAGGAAGGGCGCTGTGTCCAGCGCTCTGTACATGGCCTGGCTGGAGGCCTTGTCCCGGGACCTGCCTCCCATCCTCCTGGTGCGCGGAAACCACCAGAGTGTCCTCACCTTCTACTCTTAA

Function

NR:

description
PREDICTED: solute carrier family 12 member 2-like isoform X1

GO: NA

KEGG:

id description
K10951 SLC12A2, NKCC1; solute carrier family 12 (sodium/potassium/chloride transporter), member 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780105.1 True 4981 mRNA 0.51 27 752412 846555
XM_039780106.1 False 3866 mRNA 0.56 26 753901 846977

Neighbor

gene id symbol gene type direction distance location
crb2a NA coding downstream 92692 624960 ~ 659720 (-)
LOC120545215 NA coding downstream 130675 595893 ~ 621737 (-)
nek6 LOC102297357,LOC102792581,LOC100704402,LOC104936759,LOC101471322 coding downstream 187630 533379 ~ 564782 (-)
LOC120545827 NA coding downstream 293136 458084 ~ 459276 (-)
mapkap1 mapkap1,LOC102781088 coding downstream 410035 302496 ~ 342377 (-)
slc27a6 slc27a6 coding upstream 36892 883869 ~ 951206 (-)
lmnb1 lmnb1 coding upstream 120022 966999 ~ 987881 (-)
LOC120545116 LOC103364476 coding upstream 165167 1012144 ~ 1033929 (-)
LOC120544936 LOC107748254 coding upstream 327551 1174528 ~ 1183903 (-)
syk syk coding upstream 545787 1392764 ~ 1423159 (-)
LOC120545599 fbxw2 non-coding downstream 7000 672472 ~ 745412 (-)
G171728 NA non-coding downstream 152364 599546 ~ 600048 (-)
G171719 NA non-coding downstream 181508 570301 ~ 570904 (-)
G171718 NA non-coding downstream 185070 567019 ~ 567342 (-)
G171680 NA non-coding downstream 233342 518840 ~ 519070 (-)
G171792 NA non-coding upstream 33601 880578 ~ 880789 (-)
G171793 NA non-coding upstream 38475 885452 ~ 885653 (-)
G171794 NA non-coding upstream 42944 889921 ~ 890164 (-)
G171795 NA non-coding upstream 44183 891160 ~ 891377 (-)
G171839 NA non-coding upstream 161854 1008831 ~ 1009427 (-)
prrc1 prrc1 other upstream 147460 994437 ~ 1008188 (-)
megf10 megf10 other upstream 193821 1040798 ~ 1146587 (-)
G171868 NA other upstream 323226 1170203 ~ 1170789 (-)
G172032 NA other upstream 749539 1596516 ~ 1602156 (-)
G172311 NA other upstream 2137845 2984822 ~ 2985260 (-)

Expression


Co-expression Network