Gene
RNA
| Item | Value |
|---|---|
| gene id | txnl1 |
| gene name | txnl1,LOC102796010 |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053128.1 |
| NCBI id | CM020925.1 |
| chromosome length | 37416781 |
| location | 6353213 ~ 6362103 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| txnl1 | Is expressed in liver. Orthologous to human TXNL1 (thioredoxin like 1). |
| description |
|---|
| PREDICTED: thioredoxin-like protein 1-like |
| id | name | namespace |
|---|---|---|
| GO:0045454 | cell redox homeostasis | biological_process |
| GO:0006662 | glycerol ether metabolic process | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0015035 | protein disulfide oxidoreductase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039780192.1 | True | 1300 | mRNA | 0.50 | 8 | 6353213 | 6362103 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nars1 | nars | coding | downstream | 5563 | 6328407 ~ 6347650 (-) |
| fech | fech | coding | downstream | 31060 | 6297741 ~ 6322153 (-) |
| LOC120545633 | NA | coding | downstream | 433741 | 5907359 ~ 5919472 (-) |
| LOC120545631 | NA | coding | downstream | 446513 | 5900452 ~ 5906700 (-) |
| ccni | ccni,LOC106529109,LOC106925549,LOC106963610 | coding | downstream | 467785 | 5858973 ~ 5885428 (-) |
| LOC120545786 | rab27b,LOC104935727,LOC103374166,LOC104963949,LOC108228659 | coding | upstream | 826092 | 7188195 ~ 7274967 (-) |
| LOC120544992 | NA | coding | upstream | 933406 | 7295509 ~ 7297921 (-) |
| LOC120545581 | NA | coding | upstream | 962439 | 7324542 ~ 7361945 (-) |
| kcnv2a | kcnv2,LOC102778926 | coding | upstream | 1018341 | 7380444 ~ 7393965 (-) |
| vldlr | vldlr | coding | upstream | 1034951 | 7397054 ~ 7466061 (-) |
| G173335 | NA | non-coding | downstream | 25098 | 6327187 ~ 6328115 (-) |
| G173324 | NA | non-coding | downstream | 69013 | 6270430 ~ 6284200 (-) |
| G173336 | onecut2 | non-coding | downstream | 82836 | 6270079 ~ 6270377 (-) |
| LOC120545015 | NA | non-coding | downstream | 131506 | 6219459 ~ 6221707 (-) |
| G173290 | NA | non-coding | downstream | 135661 | 6216568 ~ 6217552 (-) |
| G173361 | NA | non-coding | upstream | 8928 | 6371031 ~ 6371737 (-) |
| G173410 | NA | non-coding | upstream | 93494 | 6455597 ~ 6495899 (-) |
| G173418 | NA | non-coding | upstream | 136764 | 6498867 ~ 6499147 (-) |
| G173467 | NA | non-coding | upstream | 799621 | 7161724 ~ 7162217 (-) |
| G173526 | NA | non-coding | upstream | 931927 | 7294030 ~ 7294426 (-) |
| LOC120545230 | NA | other | downstream | 952535 | 5396633 ~ 5400678 (-) |
| odf2a | LOC103374699 | other | downstream | 1455856 | 4846279 ~ 4897357 (-) |
| G172920 | NA | other | downstream | 1581910 | 4770817 ~ 4771303 (-) |
| dpm2 | dpm2 | other | downstream | 1793445 | 4552871 ~ 4559768 (-) |
| cdk9 | cdk9 | other | downstream | 2205400 | 4139166 ~ 4147813 (-) |
| LOC120544971 | NA | other | upstream | 6204 | 6368307 ~ 6374489 (-) |
| LOC120546140 | NA | other | upstream | 458709 | 6820812 ~ 6820866 (-) |
| G173470 | LOC103389048,LOC105418623 | other | upstream | 790767 | 7152870 ~ 7160087 (-) |
| G173727 | LOC107687935 | other | upstream | 1995620 | 8357723 ~ 8358027 (-) |
| LOC120545754 | zfand5,LOC102789640,LOC104922891,LOC103362637,LOC102194010,LOC102308986 | other | upstream | 2263379 | 8625482 ~ 8634067 (-) |
