syk (syk)


Basic Information

Item Value
gene id syk
gene name syk
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 1392764 ~ 1423159 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780304.1
TGTCAAGGAAGTCGTTGAAATGAGGAAGCTTCGGTCCTCCGCCGCCTCACTACATTTGTGATCAGGACCCAGTACAGGCCGTAGTCCGGCTGGGGAGCACGGTGCGAACTGCTGGCAGCCGGAATGCTGAAGGACTGAGAGAACCGAGCCAGAGGAGGATCCGCACTCGGGACTACTTCACCACATCGTATACAggTTGATTGCATCCTGGTGGCTGAACTTTGTTCTGGGACTTCCTTAAGGGAGCCACCCTCACAGAAGCCAACATGGCTGACGCAGTGAACGCATTGCCATTCTTCTATGGCAACATCACCAGGGAAGAGGCGGAGGACTACCTGCGGCAGGCGGGCACGATCAACGGCTTGTACCTGCTCCGGCAAAGCCGAAACTATCTGGGAGGCTTTGCACTGTCTGTGCTGTATTCCGGCCGCTGCTACCACTACACCATTGAAAGACAACCCAGTGACACATACGCTATCGTTGGCGGTAAGAGCCACAGGAGCCCTGTCGATGTGATCGACTACCACGCCCAGGAGATGGATGGCCTCGTGTGTCTGCTGAAGAAGCCCTGCAACAGGCCCAGGAACATGCAGCCAAAAGTGGGGCCGTTTGAGGACCTGAAGGAAAAACTGATCCGGGAGTATGTGAAGCAGACATGGAACCTGCAGggggcAGCTCTGGAGCAGGCCATCATCAGCCAGAGACCTCAGCTGGAGAAGCTCATTTCCACCACTGCACACGAAAAAATGCCCTGGTTCCATGGATCCATAACACGGGAAGGCTGTGAGCCCAGGCTCCAAAACGGCTCCCGTATAAACGGAAAATTCCTGATCCGACAGAGAGATTTGAATGGATCCTATGCTCTGTGTTTGCTGCATGAAGGACAAGTCATGCATTATCGCATTGACAGGGACAGGAATGGCAAGCTCTCCATCCCAGATGGCAAGCAGTTTGACACCCTGTGGCAGCTGGTGGAGCACTACTCCTACAAACCGGACGGCCTGCTGCGGGTGCTAACAGAGCCGTGTCCTCGACCCGAAGGGGACGTGCTGATTGGACGGACACTACTCCAACGGGACCATCCTGGATTAAGTTCAGCCTTgcagaATGCAGCAGGTGGGATTATCTCCAAACTCAAAACTGTTCCCATACCCGGCCTAAAGAAGAGGGGATCTCGACACAACACCACAGATAATTTAAATCCTTATGAAACCAGAGTGCCCAATAATCAAACAGGTGGAAAAGAGGCCATGCCGATGGACACGGAGGTGTATGAGAGTCCATACGCAGACCCAGATGAACTAAGGAGTTCCACAGTGGATCGCAGCCAGCTCTTCTTGGAGGATGGAGAACTGGGTTCTGGGAACTTTGGTACAGTCATGAAGGGCATCTACAAGATGAGAAAGACAGAGAAGCCAGTTGCAGTCAAAATCCTGAAGAATGATGATAACCTCCAATCAGTAACCGATGAAATGCTGCGAGAAGCCAATGTCATGCAACAGCTGGACAACCCTTATATCGTCCGGATGATCGGTATATGTGAGGCAGAGAGCCTCATGCTGGTCATGGAGCTGGCCGAGCTGGGACCACTCCACAAGTTCCTGCAGAAACACAAgcaaacaACGGTGAAGAACATCACGGAGCTGGTCCACCAGGTGTCTATGGGGATGAAGTACCTGGAGGAGCATAACTTTGTCCACAGAGACCTGGCTGCCAGGAACGTGCTGCTGGTCACGCAGCACTACGCCAAGATCAGCGACTTTGGCCTCTCCAAAGCTGTCGCTGAGGAGCAGAACTACTACAAGGCCAAGGGTCATGGGAAGTGGCCAGTGAAATGGTATGCTCCTGAGTGTATAAACTACTTCAAATTCTCTTCCAAAAGTGATGTGTGGAGCTTTGGGGTGCTCATGTGGGAGGCCTTCTCCTACGGCCAGAAACCCTACAAGGGAATGAAAGGAAATGATGTCATGCAGATGATTGAAAGTGGAAGTCGAATGGATGCCCCGCTCAACTGTCCACCAGAGATGTATGACCTCATGACTACCTGCTGGACATACAAGTTGGATGACAGGCCTGGATTCTCCGTTGTTGAGCCCAGACTACGAGAATATTATTACGACATTTCCCAGTGATTCTTCACATGGATGTTATGAGAGAACCCAAACTGTTGGTTGATGAGAAAAACTCCATTTAATCGCGTACGAATGACTTGTTTCCTGTTATGAAATATAAATGCTGTTGTAGAACATTGACTTCAACTGGAGGAATAATTCTAACTTTTAAACATATACCATAATtatgcaaattacatttattttattacttgTTCATTCCTGAATGTACACAATGTGGAAGTTGTAATAAACATATCCAAGTCTATCTTA
>XM_039780305.1
TTTTCATGTGGTTTTGACGGCACATTTCTTGTTCTTTAAGGAGCTGGCTGAAGTTAACATGATGTGTTGGACATGTTGTTCAGACTGCTGGCAGCCGGAATGCTGAAGGACTGAGAGAACCGAGCCAGAGGAGGATCCGCACTCGGGACTACTTCACCACATCGTATACAggTTGATTGCATCCTGGTGGCTGAACTTTGTTCTGGGACTTCCTTAAGGGAGCCACCCTCACAGAAGCCAACATGGCTGACGCAGTGAACGCATTGCCATTCTTCTATGGCAACATCACCAGGGAAGAGGCGGAGGACTACCTGCGGCAGGCGGGCACGATCAACGGCTTGTACCTGCTCCGGCAAAGCCGAAACTATCTGGGAGGCTTTGCACTGTCTGTGCTGTATTCCGGCCGCTGCTACCACTACACCATTGAAAGACAACCCAGTGACACATACGCTATCGTTGGCGGTAAGAGCCACAGGAGCCCTGTCGATGTGATCGACTACCACGCCCAGGAGATGGATGGCCTCGTGTGTCTGCTGAAGAAGCCCTGCAACAGGCCCAGGAACATGCAGCCAAAAGTGGGGCCGTTTGAGGACCTGAAGGAAAAACTGATCCGGGAGTATGTGAAGCAGACATGGAACCTGCAGggggcAGCTCTGGAGCAGGCCATCATCAGCCAGAGACCTCAGCTGGAGAAGCTCATTTCCACCACTGCACACGAAAAAATGCCCTGGTTCCATGGATCCATAACACGGGAAGGCTGTGAGCCCAGGCTCCAAAACGGCTCCCGTATAAACGGAAAATTCCTGATCCGACAGAGAGATTTGAATGGATCCTATGCTCTGTGTTTGCTGCATGAAGGACAAGTCATGCATTATCGCATTGACAGGGACAGGAATGGCAAGCTCTCCATCCCAGATGGCAAGCAGTTTGACACCCTGTGGCAGCTGGTGGAGCACTACTCCTACAAACCGGACGGCCTGCTGCGGGTGCTAACAGAGCCGTGTCCTCGACCCGAAGGGGACGTGCTGATTGGACGGACACTACTCCAACGGGACCATCCTGGATTAAGTTCAGCCTTgcagaATGCAGCAGGTGGGATTATCTCCAAACTCAAAACTGTTCCCATACCCGGCCTAAAGAAGAGGGGATCTCGACACAACACCACAGATAATTTAAATCCTTATGAAACCAGAGTGCCCAATAATCAAACAGGTGGAAAAGAGGCCATGCCGATGGACACGGAGGTGTATGAGAGTCCATACGCAGACCCAGATGAACTAAGGAGTTCCACAGTGGATCGCAGCCAGCTCTTCTTGGAGGATGGAGAACTGGGTTCTGGGAACTTTGGTACAGTCATGAAGGGCATCTACAAGATGAGAAAGACAGAGAAGCCAGTTGCAGTCAAAATCCTGAAGAATGATGATAACCTCCAATCAGTAACCGATGAAATGCTGCGAGAAGCCAATGTCATGCAACAGCTGGACAACCCTTATATCGTCCGGATGATCGGTATATGTGAGGCAGAGAGCCTCATGCTGGTCATGGAGCTGGCCGAGCTGGGACCACTCCACAAGTTCCTGCAGAAACACAAgcaaacaACGGTGAAGAACATCACGGAGCTGGTCCACCAGGTGTCTATGGGGATGAAGTACCTGGAGGAGCATAACTTTGTCCACAGAGACCTGGCTGCCAGGAACGTGCTGCTGGTCACGCAGCACTACGCCAAGATCAGCGACTTTGGCCTCTCCAAAGCTGTCGCTGAGGAGCAGAACTACTACAAGGCCAAGGGTCATGGGAAGTGGCCAGTGAAATGGTATGCTCCTGAGTGTATAAACTACTTCAAATTCTCTTCCAAAAGTGATGTGTGGAGCTTTGGGGTGCTCATGTGGGAGGCCTTCTCCTACGGCCAGAAACCCTACAAGGGAATGAAAGGAAATGATGTCATGCAGATGATTGAAAGTGGAAGTCGAATGGATGCCCCGCTCAACTGTCCACCAGAGATGTATGACCTCATGACTACCTGCTGGACATACAAGTTGGATGACAGGCCTGGATTCTCCGTTGTTGAGCCCAGACTACGAGAATATTATTACGACATTTCCCAGTGATTCTTCACATGGATGTTATGAGAGAACCCAAACTGTTGGTTGATGAGAAAAACTCCATTTAATCGCGTACGAATGACTTGTTTCCTGTTATGAAATATAAATGCTGTTGTAGAACATTGACTTCAACTGGAGGAATAATTCTAACTTTTAAACATATACCATAATtatgcaaattacatttattttattacttgTTCATTCCTGAATGTACACAATGTGGAAGTTGTAATAAACATATCCAAGTCTATCTTA
>XM_039780306.1
TGTCAAGGAAGTCGTTGAAATGAGGAAGCTTCGGTCCTCCGCCGCCTCACTACATTTGTGATCAGGACCCAGTACAGGCCGTAGTCCGGCTGGGGAGCACGGTGCGAACTGCTGGCAGCCGGAATGCTGAAGGACTGAGAGAACCGAGCCAGAGGAGGATCCGCACTCGGGACTACTTCACCACATCGTATACAggTTGATTGCATCCTGGTGGCTGAACTTTGTTCTGGGACTTCCTTAAGGGAGCCACCCTCACAGAAGCCAACATGGCTGACGCAGTGAACGCATTGCCATTCTTCTATGGCAACATCACCAGGGAAGAGGCGGAGGACTACCTGCGGCAGGCGGGCACGATCAACGGCTTGTACCTGCTCCGGCAAAGCCGAAACTATCTGGGAGGCTTTGCACTGTCTGTGCTGTATTCCGGCCGCTGCTACCACTACACCATTGAAAGACAACCCAGTGACACATACGCTATCGTTGGCGGTAAGAGCCACAGGAGCCCTGTCGATGTGATCGACTACCACGCCCAGGAGATGGATGGCCTCGTGTGTCTGCTGAAGAAGCCCTGCAACAGGCCCAGGAACATGCAGCCAAAAGTGGGGCCGTTTGAGGACCTGAAGGAAAAACTGATCCGGGAGTATGTGAAGCAGACATGGAACCTGCAGggggcAGCTCTGGAGCAGGCCATCATCAGCCAGAGACCTCAGCTGGAGAAGCTCATTTCCACCACTGCACACGAAAAAATGCCCTGGTTCCATGGATCCATAACACGGGAAGGCTGTGAGCCCAGGCTCCAAAACGGCTCCCGTATAAACGGAAAATTCCTGATCCGACAGAGAGATTTGAATGGATCCTATGCTCTGTGTTTGCTGCATGAAGGACAAGTCATGCATTATCGCATTGACAGGGACAGGAATGGCAAGCTCTCCATCCCAGATGGCAAGCAGTTTGACACCCTGTGGCAGCTGGTGGAGCACTACTCCTACAAACCGGACGGCCTGCTGCGGGTGCTAACAGAGCCGTGTCCTCGACCCGAAGGGGACGTGCTGATTGGACGGACACTACTCCAACGGGACCATCCTGGATTAAGTTCAGCCTTgaATGCAGCAGGTGGGATTATCTCCAAACTCAAAACTGTTCCCATACCCGGCCTAAAGAAGAGGGGATCTCGACACAACACCACAGATAATTTAAATCCTTATGAAACCAGAGTGCCCAATAATCAAACAGGTGGAAAAGAGGCCATGCCGATGGACACGGAGGTGTATGAGAGTCCATACGCAGACCCAGATGAACTAAGGAGTTCCACAGTGGATCGCAGCCAGCTCTTCTTGGAGGATGGAGAACTGGGTTCTGGGAACTTTGGTACAGTCATGAAGGGCATCTACAAGATGAGAAAGACAGAGAAGCCAGTTGCAGTCAAAATCCTGAAGAATGATGATAACCTCCAATCAGTAACCGATGAAATGCTGCGAGAAGCCAATGTCATGCAACAGCTGGACAACCCTTATATCGTCCGGATGATCGGTATATGTGAGGCAGAGAGCCTCATGCTGGTCATGGAGCTGGCCGAGCTGGGACCACTCCACAAGTTCCTGCAGAAACACAAgcaaacaACGGTGAAGAACATCACGGAGCTGGTCCACCAGGTGTCTATGGGGATGAAGTACCTGGAGGAGCATAACTTTGTCCACAGAGACCTGGCTGCCAGGAACGTGCTGCTGGTCACGCAGCACTACGCCAAGATCAGCGACTTTGGCCTCTCCAAAGCTGTCGCTGAGGAGCAGAACTACTACAAGGCCAAGGGTCATGGGAAGTGGCCAGTGAAATGGTATGCTCCTGAGTGTATAAACTACTTCAAATTCTCTTCCAAAAGTGATGTGTGGAGCTTTGGGGTGCTCATGTGGGAGGCCTTCTCCTACGGCCAGAAACCCTACAAGGGAATGAAAGGAAATGATGTCATGCAGATGATTGAAAGTGGAAGTCGAATGGATGCCCCGCTCAACTGTCCACCAGAGATGTATGACCTCATGACTACCTGCTGGACATACAAGTTGGATGACAGGCCTGGATTCTCCGTTGTTGAGCCCAGACTACGAGAATATTATTACGACATTTCCCAGTGATTCTTCACATGGATGTTATGAGAGAACCCAAACTGTTGGTTGATGAGAAAAACTCCATTTAATCGCGTACGAATGACTTGTTTCCTGTTATGAAATATAAATGCTGTTGTAGAACATTGACTTCAACTGGAGGAATAATTCTAACTTTTAAACATATACCATAATtatgcaaattacatttattttattacttgTTCATTCCTGAATGTACACAATGTGGAAGTTGTAATAAACATATCCAAGTCTATCTTA

Function

symbol description
syk Predicted to enable non-membrane spanning protein tyrosine kinase activity and signaling receptor binding activity. Acts upstream of or within lymphangiogenesis and positive regulation of cell migration involved in sprouting angiogenesis. Predicted to be located in cytoplasm. Predicted to be extrinsic component of cytoplasmic side of plasma membrane. Human ortholog(s) of this gene implicated in primary immunodeficiency disease. Orthologous to human SYK (spleen associated tyrosine kinase).

NR:

description
tyrosine-protein kinase SYK

GO: NA

KEGG:

id description
K05855 SYK; spleen tyrosine kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780304.1 True 2384 mRNA 0.50 15 1392764 1423159
XM_039780305.1 False 2360 mRNA 0.49 14 1392764 1423041
XM_039780306.1 False 2381 mRNA 0.50 15 1392764 1423159

Neighbor

gene id symbol gene type direction distance location
LOC120544936 LOC107748254 coding downstream 208861 1174528 ~ 1183903 (-)
LOC120545116 LOC103364476 coding downstream 358835 1012144 ~ 1033929 (-)
lmnb1 lmnb1 coding downstream 404883 966999 ~ 987881 (-)
slc27a6 slc27a6 coding downstream 441558 883869 ~ 951206 (-)
slc12a2 NA coding downstream 545787 752412 ~ 846977 (-)
reep5 reep5,LOC105917055,LOC107098485,LOC103152299 coding upstream 83395 1506554 ~ 1522474 (-)
nrg1 NA coding upstream 232189 1655348 ~ 1715953 (-)
slc38a9 slc38a9,LOC103372190,LOC103372967 coding upstream 323424 1746583 ~ 1794896 (-)
purg purg,LOC101478350 coding upstream 379839 1802998 ~ 1813828 (-)
il6st NA coding upstream 397605 1820764 ~ 1863988 (-)
G171960 NA non-coding downstream 19006 1369246 ~ 1373758 (-)
G171949 NA non-coding downstream 21030 1333823 ~ 1371734 (-)
G171893 NA non-coding downstream 109639 1228228 ~ 1283125 (-)
LOC120545526 NA non-coding downstream 136754 1255164 ~ 1256010 (-)
LOC120545753 NA non-coding downstream 185411 1204231 ~ 1207353 (-)
G171986 NA non-coding upstream 70072 1493231 ~ 1494317 (-)
G171987 NA non-coding upstream 71676 1494835 ~ 1496527 (-)
G172000 NA non-coding upstream 134385 1557544 ~ 1557775 (-)
G172053 NA non-coding upstream 317865 1741024 ~ 1741430 (-)
G172111 NA non-coding upstream 523485 1946644 ~ 1946905 (-)
G171868 NA other downstream 221975 1170203 ~ 1170789 (-)
megf10 megf10 other downstream 246177 1040798 ~ 1146587 (-)
prrc1 prrc1 other downstream 384576 994437 ~ 1008188 (-)
G172032 NA other upstream 173357 1596516 ~ 1602156 (-)
G172311 NA other upstream 1561663 2984822 ~ 2985260 (-)
G172620 NA other upstream 2463429 3886588 ~ 3943831 (-)
cdk9 cdk9 other upstream 2716007 4139166 ~ 4147813 (-)
dpm2 dpm2 other upstream 3129712 4552871 ~ 4559768 (-)

Expression


Co-expression Network