stbd1


Basic Information

Item Value
gene id stbd1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 12312236 ~ 12318795 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780330.1
AACAAGAGGTCACTACACTTGGAAACGTGGAGGAGAGAGCGCACAGCGGTGACAGCCTGCAGCAGCCCCAGCCAGGCCTCCAgtcgcgcgcgcacacacacacgcacacacacacagacgttaCAGAAGGACAACCGGCTCTGCGATGCCGCTGAACAACGGCAACACCGTGGCCGTGGAGAGACGCGTGGACCTGGCCTCGCTCTTCTGCATGATCGGGCGCCACGGTCCCGCCGTGGCTCTGGCTCTTGTAGCCATGGCGTCGTTGCTGGCGGGTTTCATCATCTACCGGACCGTGAGGGGGAAGCGGAGGAAGGCCACAGCCGCCGACGATGACAGCAAGAGCCCCGCAGAGGAGAGTGACGCATCGGTGATCCAGCCGAGCTCCGTGGAGTCAACAGAGGGGAGTGATGAAGGCTCATCAGATGTGAAGGATGTTGATCTGAAAATCAGGCACCGCCGTGCTGCTGAGAAGACCCCTCCGCCTTATTCCCCTCCTAAGAGTGACATCCACATACCAGACGACAAGCACACTACTTCAGATGACACAGACAAAGTGGCAGTTGAGTGGGACTCTTACAAAGTAGCAGAGACGTATGCAGACGGGGCCAATTGGAGCCGGCAAAGTGCTACTAGCACTGAGGCTGAAATGGTGCTGGAGGATGCGGTTGATTGCCATCAGGGTGAAACTGATGACGCGATCAAGGACGTGTTGGAAGAGGTCCGTGATAAGGACAGCTGCTGGAAGGAGCCTGAGCCGAATAATGATGAGAACCACGAGGAAAAGGTGTTGAAAGCAGACTGCCAGGAAGATGAGGATGTGACCACAGACATGGACCATTCTGACAAGACAACCAGACAAGAGGAGGAAAACGTTCAGCGTGCTTTGACCAATCTGGCGTTTTTCGAAAAAAATCCTCATATGAGTGAAAACAGTGATGACGACCGACCACTAGAGGAAACCATAAACGGTGTGGAGTCCAACTCGGAGGAGCCCCTCATTCATATTGAAGATGTAGATGTCCCTTGCGTCTGTTATGGCAAAGATGAGGAAGAGAGTCCAGATCGTATTGATGATTTTAGTTATCTCGGCAATACTCTCCTCTCTccagaggaggaaaagaaaaatgggAGTGAGGAGGCAGAAGAGGAGTGTGTAGACCAGCAGCTAATTGATCAACAAGCTGAGATCTGGTCCTCAACATCTAGACAAGAAACAAACTGGCAGGAGCAGTGTGATCAGGAGATGGACAAGGTGACGCCACCAATGCGGGATAGTGATTGGGATGAAGATGACTGTCTGGCTGGTGAAACGATTAAAGAAGATGAAGACCACTTGAACATACTCGCAGCGGTCAAATGTGATGCCCGTTCGCCACAGTTTGACGAGCAAGATGTGGAGTTTGAACAAAAGGAGGAAAATGGCCTCGCGTGTGATCAAGAGGACGGCGTTCTTTACGATGATCAAGTAAAAGAGAAAATGCTGACTGGTGACAACACTGTTGCCTGTAGTGAAGAACCTGACAGTTCAAGCATGGCACCCAGCCCTGCTCTGCCCTGTTTGAGTGTGCCCATAAAGGCTATTAATCCTGATGACGGTCTGTCAGGTATCACCACTGACGCAAAAGCTCAAATCTCAGGCATTGCAGAATTCCCCGACTTGTCATCAGATCGTCGACACCCACAGAAAGAAGATAAAATAGCTCCAGCTCCGGATGAAGACACCAATTCTAGTACTATTCTTGGACTTCAAATGCCATCACATGAAACAGAAAATCAGGctgaaaataatgtaaatggCACAGCTTTAGTGTTGGCTGAAGAACAAAATAACCAAGTGCATGACCCTCCTGTTAAATCTTGCTGCGAAGACGAACAAAGTGTCCAAACCATAAGAAATGAAATGTGTGACGAGGCAAGTGTCGCTGCTGCTCCTGAAATAATTGCTTGCGATGGTGAAAAACTTACCGTCCATGTAATGGCTGACGTTTTTGATAAGGCGAGTGTTGCCGATTCTGGTACAGTTGACGAAGTTAGCGAAACTGCTTCTGTAATCGCTGAAGAAATATCTTGTCCTCACCTGCCATCCACTAGCCAAGACCAACAAAGTGGCCGCATGGAAATTAATGAAACTTTTGAAAAGATGAGGGTCGATTCCACTACTGGAGCAGCTGCTTGCGATAATGCTAGCTGCGCTGCACTTTCAATGTCTGTAGAAATATCCCATCCTGACATGTCGTCTTCCTCCCAAGACCAAGAAAGTGACCAAACCAAAGATTTTTTTGAAGTTGGCACTCCCATCATGATTGAGGACATCAATCCTCCCATGTGTCAAATTCCCCTTCCGTCTTTCGAGCAATTTGACCTTAGGAATGACACATCATCTGCTGGTGTTGGTGAAGAGAGTGGGATTTCAAGCATGACCGTCAGCCCTGATAATGAGTTTGACGTGAGTTTTGAGAATACGGTGCTTCCGGTGATGGATTGGGATCCACGCAAAAGTCAAAACCTCTTTGCTAACGATGCTGCCGTATCCGTCGTTAAAGAGGATACAGCAGGTATGGTGTGCGGGCTTTACCCATCACGTCACTCCCAGCCACCCCACAGCGAGCGCACAGGTGGGACTAATTATGAATCATTTGCAGCCAACGAGGACATGTTGGGTCATGAGGTTGAGGATAGTTACCACCGAGGGACGGATCAGTTCATGGCGCAGGTTGCAGACAGTGTTACCAGCTTCACCGATGACCTGGAAAAGCACACAGATGTGAAAGTTGTTGTAGAGGTTAAAGAGGAGGGAGCAGGAGTAAGTGCTAACAAGAAGGAGGAAAACAAAGCAGAGAAGGAGATAGAAGTGGACAATGAAATGACTGAAATCAGTATCATGGAGGCAACTATGGAGCATAATGAATGGATCATGGATGGAACCTACCAAGCCCTTCCCTGGATGAATCTTTCTGCCCCATCTTTTGCCCAAGACGGTACAAAAACCAACCAGCTTCCCACTGAAGAGTACCAATGCAGCTCTGATGTAACCGACTCCACTCGTATAGATACGACGGACATCCCACCTTCTGCTGAAGTCAAACAAACCAGCGCTCTCTCCCTTGTCGAcgaaaacacggaaaataacaaaaagattGGGGCGGTTCAGCCCATGCCCCAGCATGTCAACGTGACCTTTCGCATCCATTATTTCACCCAATCGCCATACCAGACGGTGGCTGTCACGGGGAACCAGCAGGAGCTGGGCAACTGGAAGGGATTCATCCCGCTAGAGAGAGCCAAGGACGGGCACTGGTCCACGGTGGTCAGCTTGCCCGCAGAGATCCACGTGGAGTGGAAGTTTGTGGTGGTGGACAAGGGGGAGGTGTGTCGCTGGGAGGAATGTGGCAACCGCCTCCTTGATACGGGCAACGGAGACGACCTGCTGGTGCACAAATGGTGGGGACGCTTGTAAGAGGTGAGGTGCGAGCAAGCTTGCGAGTACCGTGTACAGTAAGCTTTGGTACTGGATACTGAACCAGATAGAAACCAAGACCCACAGTAGATCACGACACCATTTATTAGGGGTGTGAAGCTTCACTGGTCGCACGATTCGATTATCCTATCAATGATTCGTAGCGATTCAATATCACGATGCGTCGCCacctccaatattattatatattgccaCACATGGtgttcatcaacaaattcaagcagtcaggtATATATtaactcccctttttattgtatctgcttctaaaaaaaaaacaacagacaaaaacaaaaaaagcagctaccagaaaaatcaacaagcaacatcagtcaaaaaTCAATTTATGGTCTGTCAcagcatcgatgcagaatcgtccaTATCCgcatcgatgcaatgattaatttcaacacccctatCATTTATACTGTATCATATCATGAATACGTCTTAGTAAGCATTGGTTTGGTCAATTTTGGGTTCATCAATTTGTATACAGTCTAGGTTTAATAAACtgggatacttttttttttttttttttttaatagatagGTTACTTATAACCATTGTGAGGGTTTTACAGCCCAGACGCCTAAATGTATTCTGACCTGCCAATACCTAACACCATGATCACTgggataaataaataactggGTCACCTAATGGGACATGTCTCAGAAGACTGACCTATAGCCAGTGATTAAGTGGATCTTTCAGGAAACTGAAAAGATTGCCATCAAAAGACAGAGGCATTACATAAAacgtctgcctttttttttctgtggcaGTATCTAGGATTATGCAAACTGCACCTCTTTCAAAATGTGACTTGATGCAAGTGTTTAATTTGTGTAAATGGAGGCTTTCTTATACTATCCATAATGCTGCTTGAATACTCCCCAACAATCTACGAGAACACATGCACAGTTACCTTTTTCTACAgcaataatgaaataaatacatgtatagTGTATATTGTACGACTGGTGTTAGATCAGGTATTCTAATGTGTTTACCACTAAACTGTGATATAGTTGTAACTTTGATTCTTTTATCTCGTGGgactgtgtgcatgcatgagtGTCCTATTGTTGTTCTATGAATGTGCCTTCTAAACATAATTTTTCCAATAATGTGTTATACAGCCtggcttttctttttaaagcagcTTTGCTGCCCACCATTTATTGTTTCACTACAACTTCACTGTacttaattattttctttaaaacaacggtcactttttttctgtcaagttTCAGTTACAATCAGTCCAGACTATAGTCTCTATGCCTCAGATCATGTCAGAGTTTCTTGTTATGCAATACGGTAATGATGATGCTTCTCTTGAATGTCATTAAAGGTGGAGTTGGTTGACAAAATAAAGTCTGTCATATCTGGCAATAAA

Function

NR:

description
starch-binding domain-containing protein 1

GO: NA

KEGG:

id description
K22267 STBD1; starch-binding domain-containing protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780330.1 True 4886 mRNA 0.46 3 12312236 12318795

Neighbor

gene id symbol gene type direction distance location
LOC120546050 stoml2 coding downstream 127753 12175383 ~ 12184483 (-)
pigo pigo coding downstream 138852 12162293 ~ 12173384 (-)
phf24 phf24 coding downstream 198171 12077578 ~ 12114065 (-)
prkab1a prkab1,LOC103357303 coding downstream 243817 12057731 ~ 12068419 (-)
LOC120544995 LOC103357302,LOC104927697 coding downstream 255624 12054684 ~ 12056612 (-)
musk musk coding upstream 104039 12422834 ~ 12467165 (-)
si:busm1-57f23.1 NA coding upstream 171456 12490251 ~ 12497952 (-)
galt galt,LOC102780609 coding upstream 1036393 13355188 ~ 13386974 (-)
hdhd2 hdhd2 coding upstream 1112814 13431609 ~ 13439708 (-)
skor2 skor2 coding upstream 1125911 13444706 ~ 13457895 (-)
G174403 unc13b,LOC102798935 non-coding downstream 56961 12254818 ~ 12255275 (-)
G174341 NA non-coding downstream 545776 11766230 ~ 11766460 (-)
G174335 NA non-coding downstream 565816 11746071 ~ 11746420 (-)
G174327 NA non-coding downstream 651374 11660525 ~ 11660862 (-)
G174325 NA non-coding downstream 652412 11659436 ~ 11659824 (-)
G174443 lpar1 non-coding upstream 90529 12409324 ~ 12416934 (-)
G174481 NA non-coding upstream 246907 12565702 ~ 12569571 (-)
G174482 NA non-coding upstream 308412 12627207 ~ 12627427 (-)
G174500 NA non-coding upstream 661031 12979826 ~ 12980285 (-)
G174501 NA non-coding upstream 693389 13012184 ~ 13012817 (-)
LOC120545042 NA other downstream 1147742 11153767 ~ 11164494 (-)
adra1ab LOC104947653,LOC100705829 other downstream 1916492 10378956 ~ 10395744 (-)
gtf3c4 gtf3c4,LOC102793669 other downstream 2203947 10097251 ~ 10108289 (-)
grin1a grin1a,LOC107600932,LOC103389281,LOC105024190,LOC106513393,LOC100534577,LOC101475684,LOC104936329,LOC102201489,LOC102777117,LOC102302700 other downstream 2409229 9861001 ~ 9903007 (-)
G174120 NA other downstream 2468737 9842812 ~ 9843499 (-)
G174439 NA other upstream 38133 12356928 ~ 12357890 (-)
G174442 lpar1 other upstream 71760 12390555 ~ 12391484 (-)
tmem267 tmem267 other upstream 312430 12631225 ~ 12637494 (-)
cntfr cntfr,LOC108232720,LOC103473535 other upstream 327491 12646286 ~ 12918560 (-)
ier3ip1 ier3ip1,LOC106633120,LOC102779563,LOC104954869 other upstream 1122485 13441280 ~ 13444079 (-)

Expression


Co-expression Network