slc27a6 (slc27a6)


Basic Information

Item Value
gene id slc27a6
gene name slc27a6
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 883869 ~ 951206 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780444.1
cacacacacacacacacacacaccgtgttTGTTTACCAACTGGAACAACTGGCTCAGTGTGTGGAGGGAGGGAGCGGTGTCTCGAGCTGTCTCCGCCGTGTCCACTCAGTGTTTCACAGCCGCGGACATGACTCTGTCTCTGGGCTGGCTCTGGGCTCTGGCCGCGGGGCTTTTCTCCGGGCATGTTTTGCAGAAACTCTGCTTCCCGTACTTTTGGAGGGACCTGTGGTTTCTGCTGAAGGTGGTCCGGTACGGCGTGGGGCTGGAGCTCTCCGCGCTCACCTCCAACGTGTGCACGGTGCTGGAGCGGTTCATCCAGCAGGCGCAGCGCATCCCCGACAAGCCGTTTGTCATCTTCGAGGGAGGCGTCCACACGTACCGGGACATCGAGCTACGCAGCAACAGGCTCGCCAATGTGTTCCTCCAGAGAGTCGGGCTGAGGAAGGGAGACTGCATCGCCCTGCTCATGAGCAACGAGCCCGACTTCCTGTGCGTGTGGTTCGGGCTGGCGAAGGTCGGCTGCTCGGTGGCTTTCCTCAACACCAACATCAGGTCCAGGTCTCTGCTGCACTGCTTCAGCTGCTGCGGAGCCAAAACTCTGGTCGTCGGTTCAGATTTAGTGGACAGTCTGGACGGCATCCTGCCCAGCCTGCTGGAGGACAACATCCAGGTGTGGGCCATGACGAGCCACAGTGAGCACCCACAGATGCACACTCTGTTGGATAAGATCGCTGGCGCCTCGGACCGGCCGGTACCGGCGGAGTTACGCGCCACCACCTCCCTCAAATCCCCTACCCTCTACATCTTCACCTCTGGAACAACTGGGCTCCCCAAGGCTGCGGTGATCACTCACCTGCAGAGCCTGAAGGCAGCAGCAGGGTTCTGGGCATTTGGAGCAACTCAAGAGGATGTGATGTacatctgtctgcctctctaccACAGCGCCGCTTCCTTGATCGGTATAGGAGGAACCATAAAGCTAGGTGCGACCTGCATCTTGAAGAAGAAGTTCTCGGCCTCCCagttctggaaggactgtaggAAACATGACGTTACTGTTTTCCAGTATATTGGTGAACTCTGCAGATACCTCTGCAATCAGCCCAAGACAGACGAGGATAAGGTTCACAAGGTGCGGATGGGAGTCGGGAACGGTCTGCGGCAGGACGTCTGGCGGGAGTTCCACAGTCGCTTTGGGAACATTCAAATGTGCGAGGTGTACGGCTCCACCGAGGGAAACCTGTGTTTCATGAACCATGTTGGCAAGATTGGAACCGTGGGCCGCTCTAACTTCTTCTACAGGCTCCTGTTCAAGTATGATCTGATAAAGTATGACATGGTGAAAGATGAACCAGTGACAGATCAGAATGGTTTCTGTCAGCGAGTGGAAAGGGGCGAGACGGGGCTTTTGCTGTCCAAGGTGAGCGCCACCAGCCCGTTCTTTGGCTACGCTGGGAGCAAGCAACTGACGGAGAAGAAGCTGATGAGAAACGTGTTTGTGAAGGGAGACGCCTACTTTAACACGGGCGACCTCATGGCTGAAGATCAGGAGGGCTTCATCTGTTTCAGGGACCGAGTGGGCGACACCTTCAGGTGGAAGGGTGAAAATGTAGCAACGACAGAGGTAACAGAGACTCTCGGGCTGGTGGATTTTATCCAAGAAGTCAATGTATACGGAGTGGAAATACAAGGGCACGAGGGCAGAGCGGGCATGGCTGCCATGATTGTACGACCGGGACACACGTTCGATGGGAAGAAACTGTTTGAGCATGTGTTGAGGGAAATCCCAGCGTACGCTCGTCCACTGTTCATAAGGCTTCAGGAGGAGATGGAAATGACGAGCACCTTCAAGCAGCTAGAAGATTTACTAGCTACTGCCACGGGGGGTGGGAGGACAGGTATGTTCTCCCCACACCAAGAGACCCTAATTGTTGATATGGTCCGTGAGAACAATGCCATTAAACTGAGTGAAATTCAGCAGAAGATCATTGAGGACCATGTAAATTTTGAGGGTATCAACAGTGTCCGCCTCTCTACTGTTGATCGTGTCCTCAAGCGCAACAGACTGCGCATGAAACAGCTATACAGAGCGCCCTCAGACAGAGTCAAAGAGCAAAGATTCCAGTGTGGAGGCATGCCAAGCCTGGATACGGCATGCCAGGGTTTTTTCCCCCGTTGCCTGGCCAGACAaaatgtggcctgtgatgtggATGAAGTCCTGTGGCCTGACCCGGTACGGAGCCATGATGCTGTGGCTGAGTAA

Function

symbol description
slc27a6 Predicted to enable long-chain fatty acid transporter activity and long-chain fatty acid-CoA ligase activity. Predicted to act upstream of or within fatty acid transport. Predicted to be integral component of membrane. Orthologous to human SLC27A6 (solute carrier family 27 member 6).

NR:

description
long-chain fatty acid transport protein 6-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K08749 SLC27A6, FATP6; solute carrier family 27 (fatty acid transporter), member 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780444.1 True 2263 mRNA 0.55 12 883869 951206

Neighbor

gene id symbol gene type direction distance location
slc12a2 NA coding downstream 36892 752412 ~ 846977 (-)
crb2a NA coding downstream 224149 624960 ~ 659720 (-)
LOC120545215 NA coding downstream 262132 595893 ~ 621737 (-)
nek6 LOC102297357,LOC102792581,LOC100704402,LOC104936759,LOC101471322 coding downstream 319087 533379 ~ 564782 (-)
LOC120545827 NA coding downstream 424593 458084 ~ 459276 (-)
lmnb1 lmnb1 coding upstream 15793 966999 ~ 987881 (-)
LOC120545116 LOC103364476 coding upstream 60938 1012144 ~ 1033929 (-)
LOC120544936 LOC107748254 coding upstream 223322 1174528 ~ 1183903 (-)
syk syk coding upstream 441558 1392764 ~ 1423159 (-)
reep5 reep5,LOC105917055,LOC107098485,LOC103152299 coding upstream 555348 1506554 ~ 1522474 (-)
G171792 NA non-coding downstream 3080 880578 ~ 880789 (-)
LOC120545599 fbxw2 non-coding downstream 138457 672472 ~ 745412 (-)
G171728 NA non-coding downstream 283821 599546 ~ 600048 (-)
G171719 NA non-coding downstream 312965 570301 ~ 570904 (-)
G171718 NA non-coding downstream 316527 567019 ~ 567342 (-)
G171839 NA non-coding upstream 57625 1008831 ~ 1009427 (-)
G171846 NA non-coding upstream 85625 1036831 ~ 1037526 (-)
G171848 NA non-coding upstream 87133 1038339 ~ 1038810 (-)
G171886 NA non-coding upstream 232967 1184173 ~ 1193912 (-)
LOC120545753 NA non-coding upstream 253025 1204231 ~ 1207353 (-)
prrc1 prrc1 other upstream 43231 994437 ~ 1008188 (-)
megf10 megf10 other upstream 89592 1040798 ~ 1146587 (-)
G171868 NA other upstream 218997 1170203 ~ 1170789 (-)
G172032 NA other upstream 645310 1596516 ~ 1602156 (-)
G172311 NA other upstream 2033616 2984822 ~ 2985260 (-)

Expression


Co-expression Network