LOC120545863


Basic Information

Item Value
gene id LOC120545863
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 19273397 ~ 19274633 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780486.1
ATGGATGCAGATCTAGTGATTAAATTCATCATCAGAGCACTCATGTTTCTAGGAGGGATCCTGGGAAACAGCTGGCTGGCTATATGCTCCCTGCATGCGCAGAAATCTGGCATCCGCACCAATGAGGTCCTTTTCATCAACCTGGCTGTCTCCAACCTCATCACTAACTACCTGGTGGACCTTCCCGACACCATGGCATATTTAGCTGGACGTTGGTTCCTAGGGGAAACCTTTTGTTTCGTGTTTCGTTTTTGCTCCGACCTCTCTGAAACCAGCAGCATCTACACAACCCTCTTCATCTGTGCTTTCTGGCACCAGAAGCTCGTCGGCTCCCTGAAGCGTGGAGGCGCACCGGCGCAGCTGGACAGCCTGTGCTTGGTGGGCTGTCTGCTGGCTGGGAGCTGGACATTGGCTGTGGTCTTCAGCATCCCACACTTTTTCTTTGTCGCAGCGGAGTCCAAAAACGAGAGCTATGAACAGTGTAAAGATATCTTCCCTAATGGGATTGACAGCAAAACCTATGACATATTTTATCTAACCTTTGCTAATGCTCTCCCTGTTGCTGGAATTGTTTTTACCAGTGTCCAGATTGTCATCACTCTGTTCCAAAACCTGCGACGTATACAGGGTCATACCTCTGACCCTACCAAGGAGAAGGTTAAGGATGAAAGAAAGAGTATtgaaaacagaaatatcagcaCTGTTTCTTGTCCAGGGACCTCAAAAAATCCCAAAGATTCTGCATCCCTAACCCACATTTATAAAGACGTGCCTGTTTATTCCTGTCCAAATGGAGGGCTGTCAGGTCACAGCTCTCCCCTCAACAGGGTAACAAACACTGAGAGCAGAGTTGGACCTCCACCAAATCTTCCAAGGCCCAGCCAAACACCAGCTAAGCCTAGTTTGAGCTCGACCACTCAGGTGAGGGCAGCCAAGAGTGTGCTGGCTGTAGCCAGCGTGTTCTTGGTCTGCTGGCTGACTCATCTGGTTGTGCGCATCACCAACACTGTTCACACCTCGTCAATCGCAATGGAGGTGGCCAGCTATACTGGAGCCGCCTACACCTGCATCATCCCCTACATATTCCTGTTCGGAATGAAAAGGATTTCTTGCTCATGGAAAAGATAGAAAGGTGTACATCACAGCTAGATCCAAATCTGCCAAAAGTGGTCTTTTTGATAAATGAAAGCATGCATTACTTGTACAAGAAACTGTAGAAGAGATGGGGATGAACATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780486.1 True 1237 mRNA 0.48 1 19273397 19274633

Neighbor

gene id symbol gene type direction distance location
rfx3 rfx3 coding upstream 59932 19195656 ~ 19213465 (+)
glis3 NA coding upstream 79999 19177139 ~ 19193398 (+)
bmpr1bb bmpr1b,LOC102795848,LOC101481773,LOC102310602 coding upstream 307072 18906742 ~ 18966325 (+)
pdlim5b LOC104950678,LOC102795075,LOC100697721 coding upstream 367535 18868353 ~ 18905862 (+)
opn4xa LOC103360637 coding upstream 408510 18859268 ~ 18864887 (+)
mlana mlana coding downstream 44339 19318972 ~ 19322239 (+)
exosc2 exosc2 coding downstream 166943 19441576 ~ 19447599 (+)
abl1 abl1 coding downstream 174930 19449563 ~ 19486106 (+)
ddx54 NA coding downstream 242177 19516810 ~ 19525324 (+)
trnac-gca_32 NA coding downstream 242602 19517235 ~ 19517306 (+)
G175973 NA non-coding upstream 418849 18851078 ~ 18854548 (+)
G175974 NA non-coding upstream 436643 18836175 ~ 18836754 (+)
G175925 LOC103360647,LOC104958910,LOC102220109 non-coding upstream 599432 18670383 ~ 18673965 (+)
G175917 NA non-coding upstream 615113 18657690 ~ 18658284 (+)
G175891 NA non-coding upstream 685104 18587759 ~ 18588293 (+)
G176173 LOC104959907,LOC106527788,LOC107745368,LOC106563285 non-coding downstream 213677 19488310 ~ 19492082 (+)
G176177 NA non-coding downstream 221403 19496036 ~ 19502184 (+)
G176225 LOC104956387,LOC101069739 non-coding downstream 288613 19563246 ~ 19565919 (+)
G176226 LOC103367784 non-coding downstream 292306 19566939 ~ 19567169 (+)
LOC120546000 NA non-coding downstream 316109 19590742 ~ 19593712 (+)
srsf9 srsf9,LOC104958899,LOC100707309 other upstream 549612 18676021 ~ 18723785 (+)
LOC120545610 NA other upstream 615778 18656524 ~ 18657619 (+)
cabp7b cabp7,LOC104925332 other upstream 622328 18635026 ~ 18651069 (+)
myo1hb LOC103374943,LOC101465300,LOC102786650 other upstream 725256 18536631 ~ 18548141 (+)
tmem120b tmem120b,LOC101471304,LOC102195879 other upstream 872951 18391739 ~ 18400446 (+)
LOC120545529 ermp1,LOC102800265 other downstream 105617 19380250 ~ 19402379 (+)
LOC120545241 LOC105930800,LOC102780299,LOC103149678,LOC107095870,LOC100701678 other downstream 637203 19911836 ~ 19914680 (+)
pappaa pappa other downstream 1240714 20515347 ~ 20620786 (+)
G176526 NA other downstream 1672051 20946684 ~ 20947055 (+)
G176753 NA other downstream 3004247 22278880 ~ 22282163 (+)

Expression


Co-expression Network