galt (galt,LOC102780609)


Basic Information

Item Value
gene id galt
gene name galt,LOC102780609
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 13355188 ~ 13386974 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780518.1
ACAGGAAGTAGGCAGAGGAATTTTATGGACTGGTAGctagcattgacatatatataaggcAGCTAGCTGTCAACTAAAGTTCAGGAGGAGTTAGCTAACGGTTCAAGGATTTAGCACCGGAGAGGTGACAGTTCTGAAACAGCACCACCCGACATGAGTGGCAAAAAAGAAGTCCGTTTTGATCCAAAAGAGCACCAGCATCTGCGTTATAACCCTTTGCGGGACACCTGGGTCCTGGTGTCGGCCCATCGCATGAAGAGACCCTGGGCAGGTCAGGTAGAAAAACCTCCTGAGGAACACACACCCAGATATGACCCCCGCAACCCACTCTGTCCCGGAAACACGCGTGCAAATGGAGAGGTAAATTCAGACTATGACAgcacttttctttttgaaaatgatttCCCTGCTCTTCAGCCTGATGCTCCTGATCCTGATTCAGATCAACATCCATTGTTTCAGTGTAAAGCAGCCAGGGGCGTCTGTAAGGTCATGTGTTTCCATCCCTGGTCTGACGTCACCCTTTCGCTCATGAAAAAACAAGAGGTTGTCAAGGTGATTGACAAGTGGGCAGAGCTTGTCGAAGAACTAGGCACCACGTACCTCTGGGTTCAAaTCTTTGAGAATAAAGGAGCTATGATGGGCTGTTCAAATCCACATCCTCACTGTCAGGTGTGGGCCAGCAACTTCCTGCCTAATGAGCCTGCTCTGTCTGACCGCTGTCAGAGAGCCTACTATCAGAAACATGGAGAACCGCTGCTGCTGCAATACGCCAAACAAGAGGCTGAGAAAAAGGAGCGTGTGGTGGTGGAgacttctgattggctggcagTGGTTCCATATTGGGCAACGTGGCCCTACCAGACGCTGTTGTTGCCACGACGACATGTCCTCAGGATCAGTGACCTGAcaacagaggagagggaggGTCTGGCTGACATTATGAAGCGACTGCTGACCAAGTATGACAATCTGTTTGAAATCTCTTTCCCCTACTCCATGGGCTGGCACGGTGCCCCGACTGGCCCCCATTTGAACAAAGACAACTCTCATTGGCAGCTGCATGCTCACTACTACCCTCCTCTGCTGCGTTCAGCTACAGTTAAGAAGTTTATGGTGGGGTATGAGATGCTTGCCCAGGAGCAAAGGGACCTCACCCCTGAACAGGCTGCTGAGAACCTACAGAATCTACCAGAGGAACACTATAAAACCAGGGAGAACCtggaaaaaggaggaggaaaagagaaagaaggagaaaagtgaaatgacctgtgtgtgtggttagaaGAGAGGGGACAAATCCAGCTTCATTTAAAccccatatactgtacattttggaTATATATCCATGATAATGTATGGCTTTTGTTTTggaattattataaaaaaaaacatttgttataTGTAACTTCTCTGAAGTGGTGCAACATGTTAAAAGTGCCTTTGCGAACACAGGGCTTGAAGATATTCTTACTTGCACAATacacagtatatgtatatattttcaaTAAATTTTTCTTCCCACA

Function

symbol description
galt Enables UDP-glucose:hexose-1-phosphate uridylyltransferase activity. Acts upstream of or within galactose catabolic process via UDP-galactose. Predicted to be active in cytoplasm. Used to study galactosemia. Human ortholog(s) of this gene implicated in classic galactosemia. Orthologous to human GALT (galactose-1-phosphate uridylyltransferase).

NR:

description
galactose-1-phosphate uridylyltransferase

GO:

id name namespace
GO:0006012 galactose metabolic process biological_process
GO:0008108 UDP-glucose molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K00965 galT, GALT; UDPglucose--hexose-1-phosphate uridylyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780518.1 True 1526 mRNA 0.47 11 13355188 13386974

Neighbor

gene id symbol gene type direction distance location
si:busm1-57f23.1 NA coding downstream 857236 12490251 ~ 12497952 (-)
musk musk coding downstream 888023 12422834 ~ 12467165 (-)
stbd1 NA coding downstream 1036393 12312236 ~ 12318795 (-)
LOC120546050 stoml2 coding downstream 1170705 12175383 ~ 12184483 (-)
pigo pigo coding downstream 1181804 12162293 ~ 12173384 (-)
hdhd2 hdhd2 coding upstream 44635 13431609 ~ 13439708 (-)
skor2 skor2 coding upstream 57732 13444706 ~ 13457895 (-)
LOC120545744 hspb9 coding upstream 226306 13613280 ~ 13614293 (-)
LOC120545595 epha5,LOC102777475,LOC102204755,LOC102304993 coding upstream 245127 13632101 ~ 13706928 (-)
plppr1 plppr1 coding upstream 572328 13959302 ~ 14020451 (-)
G174512 NA non-coding downstream 78120 13271456 ~ 13277068 (-)
LOC120546049 NA non-coding downstream 221176 13117480 ~ 13134012 (-)
G174507 NA non-coding downstream 291245 13063744 ~ 13063943 (-)
G174501 NA non-coding downstream 342371 13012184 ~ 13012817 (-)
G174500 NA non-coding downstream 374903 12979826 ~ 12980285 (-)
G174536 NA non-coding upstream 2611 13389585 ~ 13389970 (-)
G174537 NA non-coding upstream 3079 13390053 ~ 13391934 (-)
G174546 NA non-coding upstream 40881 13427855 ~ 13428083 (-)
G174563 NA non-coding upstream 194416 13581390 ~ 13582508 (-)
G174565 NA non-coding upstream 210126 13597100 ~ 13597358 (-)
cntfr cntfr,LOC108232720,LOC103473535 other downstream 436628 12646286 ~ 12918560 (-)
tmem267 tmem267 other downstream 717694 12631225 ~ 12637494 (-)
G174442 lpar1 other downstream 963704 12390555 ~ 12391484 (-)
G174439 NA other downstream 997298 12356928 ~ 12357890 (-)
LOC120545042 NA other downstream 2190694 11153767 ~ 11164494 (-)
ier3ip1 ier3ip1,LOC106633120,LOC102779563,LOC104954869 other upstream 54306 13441280 ~ 13444079 (-)
smad2 smad2,LOC102778427 other upstream 196643 13583617 ~ 13606140 (-)
G174799 dusp4,LOC103390320,LOC107396907,LOC107092021,LOC103473566,LOC102218109 other upstream 1093488 14480462 ~ 14483417 (-)
G174827 NA other upstream 1197725 14584699 ~ 14589020 (-)
G175000 arpc3 other upstream 2263763 15650737 ~ 15654486 (-)

Expression


Co-expression Network