LOC120545938 (LOC101480421,LOC106530361)


Basic Information

Item Value
gene id LOC120545938
gene name LOC101480421,LOC106530361
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 5532385 ~ 5557976 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780626.1
GACAAACACTGACTGCACACCATgataaaGATATCTACCTGTTTGGTGGCAAAACAACAAATGAGGACGGCATGTTGACATCTTCTAAAGAAATCCATAAACTCAGTATTTctaagatgAAATGGAAGGTTCCTCTGTACGTTGGAATTCCTCCGGCCCGACGACACGGACACACTGCCTTCATCCTCCACAGCCATCTGTATGTATTTGGAGGAAAGAATGAAGAGCAGGAGTTTAATGACCTGAAGGTGATGAAACTAATTAACCCCTCAGAGAGACAACCAGTGATGAAGGAGATCCTGTCAGAGTTTGGTCTACAGGTCGTCAGCCACAGCTTCACTCCCACAAAGGTTCCCAATGTCCGCTATGAGCTGAGCGAGTCTGATCTGTTCAACCAGTCCAGGAACACAGCAGCTTATGCACAGGTGTTTGTCCACAGAGACTTCAGTGCAGTTCGAGATCAGGCAATGAAAACGATCCAGACAGCCTTTACTCTGCTGGACCAGGAGTTCCAGAAAGTGGTTCGAGAAAAGTCAGAGGTTTCtcaagctgctgctgctctgcaaagagagaaagaagctcatgaagcctatagacaacaacagcaacaggagcTGCGGGAGATGCTGGACAGACATCGCTCTCAAAATGAGGCGTGGCTGCGAGCGCGAGCCGAGGAGAACGACCAAGAGAGGAAGGAGCTCTGCAGACTCAGAGAGGAGTTGTCACATGAGCAGGAAAGACTGAAGGAGGAGCATGAAAGCATCCAGAAACGCAGCGAACATCTTCTGTCCATCATGCAGCAGTTCAGATGAATGtaagatagacagatagatagataga

Function

NR:

description
acyl-CoA-binding domain-containing protein 6 isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780626.1 True 843 mRNA 0.48 10 5532385 5557976

Neighbor

gene id symbol gene type direction distance location
pam pam coding downstream 218952 5177157 ~ 5313433 (-)
derl2 derl2 coding downstream 406948 5100579 ~ 5125437 (-)
LOC120545498 smarcb1b,LOC104928041,LOC103358289,LOC106535110,LOC100704669,LOC101070741 coding downstream 432321 5043560 ~ 5100064 (-)
ppp6c ppp6c,LOC102313764,LOC102783418,LOC100701794,LOC104928043,LOC103372694,LOC101475652,LOC108228845 coding downstream 521075 5002320 ~ 5011310 (-)
scai scai coding downstream 534428 4909583 ~ 4997957 (-)
LOC120545046 LOC101480421 coding upstream 8063 5566039 ~ 5573779 (-)
ccni ccni,LOC106529109,LOC106925549,LOC106963610 coding upstream 300997 5858973 ~ 5885428 (-)
LOC120545631 NA coding upstream 342476 5900452 ~ 5906700 (-)
LOC120545633 NA coding upstream 349383 5907359 ~ 5919472 (-)
fech fech coding upstream 739765 6297741 ~ 6322153 (-)
G173131 NA non-coding downstream 8625 5523523 ~ 5523760 (-)
LOC120545002 NA non-coding downstream 33998 5494230 ~ 5498387 (-)
G173112 NA non-coding downstream 67139 5462651 ~ 5465246 (-)
G173104 NA non-coding downstream 90179 5434217 ~ 5442206 (-)
G173093 NA non-coding downstream 151648 5378877 ~ 5380737 (-)
G173136 NA non-coding upstream 28120 5586096 ~ 5586533 (-)
G173165 NA non-coding upstream 123461 5681437 ~ 5681934 (-)
G173191 NA non-coding upstream 281253 5839229 ~ 5842878 (-)
G173192 NA non-coding upstream 288971 5846947 ~ 5849235 (-)
G173228 NA non-coding upstream 327787 5885763 ~ 5886449 (-)
LOC120545230 NA other downstream 131707 5396633 ~ 5400678 (-)
odf2a LOC103374699 other downstream 635028 4846279 ~ 4897357 (-)
G172920 NA other downstream 761082 4770817 ~ 4771303 (-)
dpm2 dpm2 other downstream 972617 4552871 ~ 4559768 (-)
cdk9 cdk9 other downstream 1384572 4139166 ~ 4147813 (-)
LOC120544971 NA other upstream 810331 6368307 ~ 6374489 (-)
LOC120546140 NA other upstream 1262836 6820812 ~ 6820866 (-)
G173470 LOC103389048,LOC105418623 other upstream 1594894 7152870 ~ 7160087 (-)
G173727 LOC107687935 other upstream 2799747 8357723 ~ 8358027 (-)
LOC120545754 zfand5,LOC102789640,LOC104922891,LOC103362637,LOC102194010,LOC102308986 other upstream 3067506 8625482 ~ 8634067 (-)

Expression


Co-expression Network