dhx29 (LOC103364531)


Basic Information

Item Value
gene id dhx29
gene name LOC103364531
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 23301589 ~ 23312531 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780716.1
TTACCAAACCCAGCATGAATACGGAGAGAAATACACATTCGCGTTAGCTCTCTATTTATAACCGTAACATTTCAGGACTTTGCTGATGACTTGGAATCCCATAGCCGCATAGAGGAGCCACAGACAGGCCGTGTTTTGGTGATCTAATGggtggaaaaaagaagaaatcgGCAGCGCAAGCGGCTACCTCGGTGGCCCCGGCACCAGCAGCAGCGGGCAGGACTGGTGCTGCTGCATCGGGGAACGGCGTGGCAGAGGAGCAAAAGAAACAGCCAGCCAACAACAAGCCGGCTAAACCAGCCAAAGATAACAAGTCAAAAGCTCCAAAGACCTATAGTCTTGCCAACACTGCCCAGGTTGACACAGCTGGAGTCGCGGACAAGTCGATTCTTAAAGTTGCTATCCAAGCTGACCTGGAGAAGAAGATCATTAAGCTGATCAATGACTTCAGAGAAGAGAATGGGGACAAAGGGCCCATATCAGGCAGACTTACGAACAAGAAATTGCTGGACCTGTACACAGCTCTGCAGAAGTTCAACTTTAAGAGAGAACACATTGAGGAGTCGATGAAGAGTAGTGTGCTGTACGGAGGGGATCTCCACTCTGCTCTCGACTGGCTCTGCCTTAACCTTAAAGATGATGAGCTGCCAGACGGTTTTGCCCAGCAGATGCAGGAGGAGAGTCAGAAGAGCAGGCCCAAGTTCCAGCCACCTGCTCAGCAGAAACCAGCAGCCCTGAGCCCCAAAGCACCCAGCAACACCCGCAGAGAGACCATTAaggCCACAGAGAAGGATGAAGCTGCAAGCGTAAAGGATTGGATCTTAAGGTATGCAGAGCAGAGcagtgatgaggaggaggagaaggaggaggagaaggaagctGGGAAGAAGGCACACAATCCTGAATTGGAGGAAAAGTTTGATCCAAATGACCGGTATTTGGTCCTTACTGCTCAACTGTATGACGCAAAAGAAATGGCAGCTGTGGCCAAGACAAAAGGAGACAAGGCGGGCCAGAGGATGGCACAGGACAGGATACGCATCATACAGCAAGAAATGAAACATCTGGAGTCCCACCCCATATTCAATCCAGCTATAAAGGTGGTAGACGGGCCTCAAAAGGAAAAGAAGATACTTCCTGTCAGCGAGGACAAAGAGGATCTCAGCTTCAAGTTATTTGAACAAACTGAAAAGGCCCCTCCTGCAGAGAAAGTTCCAGTTGTGAAAAAGAACGAGCCAAAGGACATTCGCAATTTTGACTACACAGCTCGCAGTTGGACAGGAAAGTCTCCCAAACAGTTCCTCATCGACTGGGTCCGCAAGAACCTGCCCAAGAGTCCACCACCGACTTTTCACAAGGTTGCTGCTGGTAGACACTGGAGATCCaaGGTGCGTGTTCAAAGGGCAGACgatgttcttgaggtttgtccAATGATCGTGACTGAGGATAGCATGCAGGCGCAACATCTGGCAGCCACACTGGCACTCTACAACCTTGTTAAAGGACAGTCAGTGCACCAGCTCCTTCCTCCAACCTACAGAGATGTGTGGCTGGAGTGGAGGGACAGCGAACAGCAGCAACAGGAAGAGAGTCGCATTGCTGCTAACAAACCTCGGGACCAGTTCATCTCCCGACTTCTGACCAGACTCAAACAGCAGCAGAACCAAAACCAAGTGCAAGAGTCTGGATGCCAAGGCCAGCTGGAGCTGGGCATGGCTGGAAACGAAGAGCCTGAAGAGTCCTGGGAGAACCTGGCGGGTCTCGATATTGGGGAGGGAGCAGAAGAAGTGGAGGACAAGAGTGAgaaaagagggaggagggaagcAGCACTTGAGGCATCCAGAGAGCTCTTAATGAAGCTGAAGAAGTCCTCACTGGCCCACAAACTGAAGGCAGAGCGAGAGCAGCTTCCTGTCTTCCAACACCGGCATCGTGTCCTGGAGGCTCTGCAGCGCCAcccagtggtggtggtggcaggTGAGACGGGCAGCGGAAAGAGTACTCAGATCCCTCAGTTCCTCTTGGAGGAGCTGTTAACAGGAGGCAAAGTGGCGAAGCCCTGCAACATCGTGGTGACGCAGCCCCGCAGGATCTCTGCCATGAGCCTGGCCTGCAGAGTCAGCGAGGAGCTGGGCTGCGAAGATGGGCCGGGATCGAagTCGTCGCTGTGTGGATACCAGATCCGGATGGAGAATCAGTCCGGGGAGTGGACCCGCCTTCTGTACTGCACCACTGGAGTTCTGCTCAGGAAACTACAACATGACAGACACCTCAGTTCCCTAACGCACATCATCGTAGACGAGGTCCATGAGCGCAGTGTCCAGTCAGACTTCCTGTTAACCATTCTGAAAGATGTTGTCATGAGGAGATCTGACCTGCAGCTGATCCTTATGAGCGCCACAGTGGACTGTGACAAGTTCTCCAACTACTTCAACCGCTGCCCAGTGATCAGCATTCCTGGCAGGACTTTCCCAGTGGAGGTGTACCACTTAGAAGACATAGTGGAACAGACGGGGTACGTCCTGGAAAAGGACTCGGAGTACAGCCAGAAAATTCTTGAAGACGAGGAGGAAGTTAGCATCTCTATCACACAGAAAGGCGGCAAGACATCACAGCACCAGGAGGTGATATTGAAGGACTCCGCTTCCGGCTGGGATCTGGGTCCAGATCTTGACCACTTCAGCAGCAGGACTCGGCAGGTGCTGCAGTACATGAACCCTAATAAGATCAACATGGACTTACTGGTAGACCTCATCGACTACTTAGACAAATCCCCACAATTTGCGGAGATGGATGGAGCTGTTCTCGTGTTCCTCCCGGGTCTGGCTCACATCCAGCAGGTCTACGACCTGCTCTCCTCAGACAAGAGGTTCAGGGACAAAAACAGGTTCAGGATTGTTGCTCTCCACTCGACTCTCACATCAAAGGACCAGGCTGCTGCCTTCACAGTGCCACCTGCTGGAGTTAGAAAGATTGTCTTGTCGACTAACATTGCCGAGACAGGTGTGACTATTCCCGACGTCGTGTTTGTCATCGACACTGGaaaaactaaagaaaataaGTACCATGAGAGCAGCCAGATGAGTTCTCTAGTGGAGACTTTTGTTTCCAAAGCGAGCGCCCTCCagaggcaggggagagcagGACGTGTCCGGAACGGCTTCTGCTTTAGACTCTACCCAAAATTCCGGTTTGACGCCTTCATGAATTATTCCATTCCAGAGATACTACGGGTCCCACTGGAGGAGCTCTGCCTTCATATTATGAAATGTCAGTACGGCTCCCCGGAGGACTTTCTGAGCCGGGCCCTGGATCCTCCTCAGCCCCAGTCGGTCAGTAACGCCGTCAACCTGCTGAGGAAGATCGGTGCGTGTCACCCTGACAATCATCTCCTCACCCCTCTGGGACACCACCTGGCGAGTCTGCCTGTCAATGTGAAGATTGGCAAAATGCTCATCTATGGAGCCATTCTCGGCTGCCTGGAGCCCATTGCAACCATCGCGGCAGCCATTTCAGAGAAGTCTCCCTTCTCCACACCGATGAACAGGAAGGAGGAAGCCAACCTGGCCAAAGCCGCCCTGGCGTTGGCCAACTCTGATCACCTGACGATATACAATGCATATCTGGGGTGGAAGAACTCACAGGCTGATGGACAAAGGACAGAAATGTCCTACTGCAGAAAGCACTTCCTCAATCGCACAGCTCTCATCACAATAGAGGGTGTGAAGCACGAGCTGATGAAGATGATGGAGCAGGCGGGTTTCTGGTCGTCTCGCGCCTCCTCTTCTCGCTCCAAGCCGCAGACGGCGTTGCTGTCCAAGCAGCAGATCTCCGTGCTGAACGCAGTGCTGACGGCGGGGCTCTACGACAGCGTGGCCCGGGTCTTGTGCACCCCCTCTGTGGATGTGCTGGAGCGAGTGGTCTGCACGGTGGAGACGCCCCAAGGCAAGGCTCAGGTCCACCCCTCATCCGTTAACCGCAACCTGCAGACACACGGCTGGCTGCTGTACCAGGAGAAGGTGAAATACACTAAGATCTACCTGCGTGACACCACTCTGGTACCTCCTTTCCCCATGCTGTTGTTTGGAGGGGACATTGATATCCAGCACAGAGAAAGGCTCATCACACTGGACGGATGGATCCACTtccagGCTCCTGTACGGATTGGTGTGATCTTCAAACACCTGAGGAAGCTAATGGACTCTTTGCTTGAAAAGAAGCTGGAGAACCCGAGGATGAATCTTGAAGGTGAGAGGACCATCCAGATGATCCTGGATCTGATCAAATCAGAGTGACATCGGACTAACAAAGGATGTAAATTGCCACTGAATCAGTACCTTTTCTTACACTATCGACAGACCTCTGTGTCCAGTAGACCTGGGGACAAAGTGCTTCCTATTTGCTCTGGTATTTAGGATGAACAATGGCTGCAGACATCCTTAAGATGAAATGATGGTTACAGGGAACTCTTACTCACATTGAGGAGGACTGTAgcatatgaaatgaaaaaaaactacatgcTGAAATTTGAGAGgaaaaactagaaaatgatgTTGCCAAATGTGGAAATAAAGCtgtacacatttttatttgaa

Function

NR:

description
ATP-dependent RNA helicase DHX29

GO:

id name namespace
GO:0006200 obsolete ATP catabolic process biological_process
GO:0005524 ATP binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K18995 DHX29; ATP-dependent RNA helicase DHX29

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780716.1 True 4595 mRNA 0.52 28 23301589 23312531

Neighbor

gene id symbol gene type direction distance location
plpp1a plpp1,LOC102797153 coding upstream 24501 23263472 ~ 23277088 (+)
csgalnact1a LOC102302787 coding upstream 42047 23229837 ~ 23259542 (+)
nxnl2 nxnl2 coding upstream 74976 23223687 ~ 23226613 (+)
slc45a2 slc45a2 coding upstream 98659 23169487 ~ 23202930 (+)
amacr amacr coding upstream 136388 23155838 ~ 23165201 (+)
itga1 itga1 coding downstream 43692 23356223 ~ 23406309 (+)
kcmf1 kcmf1 coding downstream 94841 23407372 ~ 23417210 (+)
LOC120545384 LOC104922461,LOC103364542 coding downstream 146229 23458760 ~ 23470507 (+)
LOC120545381 LOC103364544,LOC103364545,LOC100697171,LOC104922463 coding downstream 159723 23472254 ~ 23492497 (+)
zgc:73226 LOC102294317,LOC100705876,LOC101475642,LOC108230926,LOC103357984 coding downstream 265038 23577569 ~ 23583588 (+)
G177093 NA non-coding upstream 120322 23180700 ~ 23181267 (+)
G177091 NA non-coding upstream 124087 23172252 ~ 23177502 (+)
G177089 NA non-coding upstream 129911 23166559 ~ 23171678 (+)
G177079 NA non-coding upstream 159654 23141729 ~ 23141935 (+)
G177043 NA non-coding upstream 166702 23134649 ~ 23134887 (+)
G177169 NA non-coding downstream 17619 23330150 ~ 23331248 (+)
G177170 golph3,LOC103364537,LOC106962713 non-coding downstream 19367 23331898 ~ 23335577 (+)
LOC120545237 NA non-coding downstream 23776 23336307 ~ 23347393 (+)
G177177 NA non-coding downstream 112313 23424844 ~ 23426902 (+)
G177244 NA non-coding downstream 223352 23535883 ~ 23536398 (+)
G177094 NA other upstream 117327 23182673 ~ 23184262 (+)
klhl8 klhl8 other upstream 292755 22998253 ~ 23008834 (+)
G176870 cplx4 other upstream 764252 22531908 ~ 22537337 (+)
LOC120545252 NA other upstream 777184 22496413 ~ 22524405 (+)
G176753 NA other upstream 1019426 22278880 ~ 22282163 (+)
hnrpkl LOC103364541,LOC100706673,LOC103155138,LOC103473466 other downstream 128452 23440983 ~ 23458605 (+)
rpl37 rpl37 other downstream 410947 23723478 ~ 23727242 (+)
LOC120546142 NA other downstream 411635 23724166 ~ 23724245 (+)
LOC120546141 NA other downstream 413443 23725974 ~ 23726052 (+)
dnlz dnlz,LOC104941974 other downstream 842854 24155385 ~ 24157621 (+)

Expression


Co-expression Network