pigo (pigo)


Basic Information

Item Value
gene id pigo
gene name pigo
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 12162293 ~ 12173384 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780753.1
TGCACGCTGAAGTTCCTAGCTGTCACCAGCCATCTAATCTCGTACTGAAATCCATGAAGGTGATAGGGGTGTCGCGCCGTTCTCTGTTTACCTAAAACACCTGGGACGCCTGTGTTGTAAGCACACACATtgacgccccccccccctcccctccggCCGAGAGAGGACGAAAACCCGACTGCTACAAGgatgaAGGGGCTCCCGGTGCTGTCCCTGCTCCTTTGGATGTGTGCGGTGTACTTTGTGGGCATCTACCTGTTTGTGGGTGGCTTCCTGCTGGTGAGGCTGGAAGTGAACAGGACCAGCACCTGCGGAGACGTGCTGCAGCCCGGAGAGGAGCCGGTGGACTTCTGCCGCGTCCAGCCGCGTTTCCGCCGGGCTGTCCTCCTCATCATCGACGCCCTGAAGATCGATTTCGCGTGGTTCGACCCCAACAACACGGCGCCGAGACCGTACGAGAACAAGCTGCCCGTGTTGGAGGAGACGGTCTCATCCAGGCCTTCCCACAGCCGCCTGTATCCTTTCCGCGCTGACCCGCCTACGACCACCATGCAGAGGATCAAGGGCTTCACCACGGGCTCCTTGCCTACCTTCGTGGATGTAGGTAATAACTTTGCATCCAGTGCCATCCTGGAGGACAACCTCATCCACCAGTTTGGGCAAGTGGGCAAACGAGTGGTGTTCATGGGCGACGACACTTGGGAGAATCTTTTTCCGAAGAAGTTCCACCGCTCTCTGCCCTTCCCCTCTTTCAACGTGAAGGATCTGCACACCGTGGACAATGGGATCCTCCAGCACCTCTACACAACTATGGTGGGGGACGATTGGGATGTCCTGGTTGCTCACTTCCTCGGTGTGGATCACTGCGGCCACAGGTTTGGTCCCGACCACCCAGCCATGGCAGACAAGCTCACCCAGATGGATGgagtcatcagGTCTGTGATTGACCGTCTGCACAACGACACCCTCCTGGTGGTGATGGGAGATCACGGGATGACGGACACTGGAGATCACGGCGGAGAAAGTCAGAAGGAGACCGACGCTGCCATCTTCCTCTACAGCCCGTCCCCTCTGTTTCCCGGACCGCCGTCACAGAGTGAACCGGACGTGGTGCCCCAGACAGACCTGGTGCCCACCCTGGCTCTGCTGCTTGGAGTTCCCATCCCGTACAGCAGTGTGGGGCAGGTTCTCTTGCCTCTATTCCCCCCCCACGGGCAGACGGAAGGTGCAGTTGGGCGTCTCAGCCAGCTGGAGGCGCTGTGGATCAATGCAAAACAGGTTAACCGTTTCCTAGAGACTTACTCCGGCATGGCCAAAGACATCCCGCCAGAGAGCCTCTCTCAGCTGAAGCGCCAATTCTCCCGCCTCTCCTCCGAGTACCTCAGCTCGGTTAGAGAGGGTCGGTCACCCTCGCCGCAGCTGGCCGCCTCGCTGCAGGCCTACCTCACCTCCGTCCGAGACACGTGCCGAGCCACCTGGGCTCGATTCAACCCCCTCAAGATGGCGGTCGGTTTGGCCATCCTGGCGTTCGCCTGCTTGACGTGTTTCGTCCTGTCTGAGCTGTCCCCGGTGCTGATCAGGGAGAACGCTCCCGGGCTGACGGCCCCGCTCGTCGTGGCACTGGCGGCGGGGGCTTGCGCGGCTGCCTGGCAGTTGCTGGCGCGGGGCTCCGTGGAGGCGGCGTGGTGCCTGGCGGCCGCCGCCCTCAGCTCTGAACTGCTCTTTCTCTGGAGAGCCCGTCGGCGCGGCGCCGTCCCCGCGGACAAAAACGGATCCAAAGCGCCGAAGCGTGCCACCTGGCTGACCCCGTGCcgcctcctcctcatcccgccGCTCCTGGTGCCACTGCTCCGCTGTGCCTCCCTGCTCTCGGACAGCTACGTGATCGCCGAAGGCCGGGCGGTGACCTTTCTGGTCTTCTCGCTGGCTCTCTACATTCCCATCCACCTCAACTGGGATGGCCTGCTCCTGCCGCCCATCCACGACCCTCTCAAGGCCGCGGGGTTCCTGCCGCCCGCGGCCCTGTCCCCGTCGACCGTGAGGAGAGAAAGCAGCGTCCTCCTGGCCTGCTTGGGGCTCCTCGTCGGCAGCCTctacctctccctctccttccacGCCTGTCGGGAAGAGCAGGGCTCCTGCCAGCCGTCTCCGTTCCTCTCTCCCCTGTCCCGGTTGCAGGACAGCCAGCTGAAGAACCTGCACTACGTCCTCTCCGTCTTCTCCCTGGGGCTGTGGACGTACCTGCTGAGGCGCTGCCTCCGCCACTACGGCAACCTCAACTCCTCCGGCGGGACGGCGTTCACGGCCCACTGGGTCCTGCCGCTGCTGTCCGTGTGCCTGGCGCTCCACTGGGCGGTCAGCGCCACCCCGGAGGACAGCTTCAGGAACCTGGCCGAGCTGATCGGCCTGGCCCAGCTGGCCCTCCCCAGGGCCGCCTTCTGTCTCCTGGCGCTGGGGCTGTTCCTGATCTGGCTGGATCCCCTCACGGTCTTTGTCAAGACCAGGGGCGCGGCCTCGGCCAGAGCGTCGCCGCTGCCCCCGCCGAGCTACCGGGCGAGCACGGGCATCAGCCCCCAGGCCGAGCTGCACCACCTCATCCCCCAGATCTACCAGCGCATGCGGCGCTCCATGGACGACGGCGGCGAGCTGAGCGGGGCCGGCGAGGTGGACAGCAGTCCCGCCGTGAAGGCCTACGGACTGGGGACCGTCTACTCCGCCCCCTTGCTGCTGTTCTGCGGCCTGCTGGGAAttggcctgctgctgctgcacccaGAGGGCATGGCTCTGTctttcctcctgctgctgctcgaAATGGGAGCGCTGTTGCACATTCACGCTTCCTCCACTAACCTCAGTAGCCTGCACGGAACCTATTCTGGTGGCTTTGACGTGCCCTGGACTCCAGTGGTGCTGTGGTCCCTGGCGGCCACCCAGTTTTTCCACGCCACAGGTCACCTCCCCACCTTCCCGTCCATCCAGTGGGGCGCTGCCTTCGTGGGGTTCCCTGACGGACACACAGGCACCCTACTGCCCGCCTCACTGGTCACCCTCAACACTTTTGCCTCACACATCTTGTTCGCAGCGGGTTGTCCGCTGCTGCTGTTCTGGCCCCTGGTGTGCGAGGTGCGCGGGAGCAGGGGAGCGAGAGCTTGCGGCGAAGAGGGCGAGGACGCCGTGATGGAGATGAGACTGCGAGAAAACCCCCAGCAGTTCAGCTCGGCCCTTCTTCAGCTCTCGACGCGCTACCTCTTTCTTCTCGGAGCGCAGGTCTTTGCTTCGGTCTGCGCAGCTGCTATCCTCAGGAGACACCTAATGGTGTGGAAGGTTTTTGCACCCAAGTTAATGTTCGAGGCCTCAGGGTTCCTGGTGAGCAGCGTGTCTCTACTGATCGGGGTCACACTAGTGCTGAGAGTAGACGTGGCCGTGGGCCGCTGGTTTAAGAGACTCGTCCCGGATGCGTCTAGGTAG
>XM_039780754.1
atgaAGGGGCTCCCGGTGCTGTCCCTGCTCCTTTGGATGTGTGCGGTGTACTTTGTGGGCATCTACCTGTTTGTGGGTGGCTTCCTGCTGGTGAGGCTGGAAGTGAACAGGACCAGCACCTGCGGAGACGTGCTGCAGCCCGGAGAGGAGCCGGTGGACTTCTGCCGCGTCCAGCCGCGTTTCCGCCGGGCTGTCCTCCTCATCATCGACGCCCTGAAGATCGATTTCGCGTGGTTCGACCCCAACAACACGGCGCCGAGACCGTACGAGAACAAGCTGCCCGTGTTGGAGGAGACGGTCTCATCCAGGCCTTCCCACAGCCGCCTGTATCCTTTCCGCGCTGACCCGCCTACGACCACCATGCAGAGGATCAAGGGCTTCACCACGGGCTCCTTGCCTACCTTCGTGGATGTAGGTAATAACTTTGCATCCAGTGCCATCCTGGAGGACAACCTCATCCACCAGTTTGGGCAAGTGGGCAAACGAGTGGTGTTCATGGGCGACGACACTTGGGAGAATCTTTTTCCGAAGAAGTTCCACCGCTCTCTGCCCTTCCCCTCTTTCAACGTGAAGGATCTGCACACCGTGGACAATGGGATCCTCCAGCACCTCTACACAACTATGGTGGGGGACGATTGGGATGTCCTGGTTGCTCACTTCCTCGGTGTGGATCACTGCGGCCACAGGTTTGGTCCCGACCACCCAGCCATGGCAGACAAGCTCACCCAGATGGATGgagtcatcagGTCTGTGATTGACCGTCTGCACAACGACACCCTCCTGGTGGTGATGGGAGATCACGGGATGACGGACACTGGAGATCACGGCGGAGAAAGTCAGAAGGAGACCGACGCTGCCATCTTCCTCTACAGCCCGTCCCCTCTGTTTCCCGGACCGCCGTCACAGAGTGAACCGGACGTGGTGCCCCAGACAGACCTGGTGCCCACCCTGGCTCTGCTGCTTGGAGTTCCCATCCCGTACAGCAGTGTGGGGCAGGTTCTCTTGCCTCTATTCCCCCCCCACGGGCAGACGGAAGGTGCAGTTGGGCGTCTCAGCCAGCTGGAGGCGCTGTGGATCAATGCAAAACAGGTTAACCGTTTCCTAGAGACTTACTCCGGCATGGCCAAAGACATCCCGCCAGAGAGCCTCTCTCAGCTGAAGCGCCAATTCTCCCGCCTCTCCTCCGAGTACCTCAGCTCGGTTAGAGAGGGTCGGTCACCCTCGCCGCAGCTGGCCGCCTCGCTGCAGGCCTACCTCACCTCCGTCCGAGACACGTGCCGAGCCACCTGGGCTCGATTCAACCCCCTCAAGATGGCGGTCGGTTTGGCCATCCTGGCGTTCGCCTGCTTGACGTGTTTCGTCCTGTCTGAGCTGTCCCCGGTGCTGATCAGGGAGAACGCTCCCGGGCTGACGGCCCCGCTCGTCGTGGCACTGGCGGCGGGGGCTTGCGCGGCTGCCTGGCAGTTGCTGGCGCGGGGCTCCGTGGAGGCGGCGTGGTGCCTGGCGGCCGCCGCCCTCAGCTCTGAACTGCTCTTTCTCTGGAGAGCCCGTCGGCGCGGCGCCGTCCCCGCGGACAAAAACGGATCCAAAGCGCCGAAGCGTGCCACCTGGCTGACCCCGTGCcgcctcctcctcatcccgccGCTCCTGGTGCCACTGCTCCGCTGTGCCTCCCTGCTCTCGGACAGCTACGTGATCGCCGAAGGCCGGGCGGTGACCTTTCTGGTCTTCTCGCTGGCTCTCTACATTCCCATCCACCTCAACTGGGATGGCCTGCTCCTGCCGCCCATCCACGACCCTCTCAAGGCCGCGGGGTTCCTGCCGCCCGCGGCCCTGTCCCCGTCGACCGTGAGGAGAGAAAGCAGCGTCCTCCTGGCCTGCTTGGGGCTCCTCGTCGGCAGCCTctacctctccctctccttccacGCCTGTCGGGAAGAGCAGGGCTCCTGCCAGCCGTCTCCGTTCCTCTCTCCCCTGTCCCGGTTGCAGGACAGCCAGCTGAAGAACCTGCACTACGTCCTCTCCGTCTTCTCCCTGGGGCTGTGGACGTACCTGCTGAGGCGCTGCCTCCGCCACTACGGCAACCTCAACTCCTCCGGCGGGACGGCGTTCACGGCCCACTGGGTCCTGCCGCTGCTGTCCGTGTGCCTGGCGCTCCACTGGGCGGTCAGCGCCACCCCGGAGGACAGCTTCAGGAACCTGGCCGAGCTGATCGGCCTGGCCCAGCTGGCCCTCCCCAGGGCCGCCTTCTGTCTCCTGGCGCTGGGGCTGTTCCTGATCTGGCTGGATCCCCTCACGGTCTTTGTCAAGACCAGGGGCGCGGCCTCGGCCAGAGCGTCGCCGCTGCCCCCGCCGAGCTACCGGGCGAGCACGGGCATCAGCCCCCAGGCCGAGCTGCACCACCTCATCCCCCAGATCTACCAGCGCATGCGGCGCTCCATGGACGACGGCGGCGAGCTGAGCGGGGCCGGCGAGGTGGACAGCAGTCCCGCCGTGAAGGCCTACGGACTGGGGACCGTCTACTCCGCCCCCTTGCTGCTGTTCTGCGGCCTGCTGGGAAttggcctgctgctgctgcacccaGAGGGCATGGCTCTGTctttcctcctgctgctgctcgaAATGGGAGCGCTGTTGCACATTCACGCTTCCTCCACTAACCTCAGTAGCCTGCACGGAACCTATTCTGGTGGCTTTGACGTGCCCTGGACTCCAGTGGTGCTGTGGTCCCTGGCGGCCACCCAGTTTTTCCACGCCACAGGTCACCTCCCCACCTTCCCGTCCATCCAGTGGGGCGCTGCCTTCGTGGGGTTCCCTGACGGACACACAGGCACCCTACTGCCCGCCTCACTGGTCACCCTCAACACTTTTGCCTCACACATCTTGTTCGCAGGTCTTTGCTTCGGTCTGCGCAGCTGCTATCCTCAGGAGACACCTAATGGTGTGGAAGGTTTTTGCACCCAAGTTAATGTTCGAGGCCTCAGGGTTCCTGGTGAGCAGCGTGTCTCTACTGATCGGGGTCACACTAGTGCTGAGAGTAGACGTGGCCGTGGGCCGCTGGTTTAAGAGACTCGTCCCGGATGCGTCTAGGTAGCGACGCCGGCGCTGCCCACCAGAGCTCAACGCGCCACAGTGAAAAGGGACATAAAAGGgactttaaagttttttttataccGACCTctcacaagaaaaaaaatgacattgccATCTGTGTCTCGCATAAGGATCCCCACAAACACGTCGTGTGAGGTTGCCACGTACTGTAACTCTCTTTGAGGGCTATGTCATGCATTACTGACATTTTCAGCCAGAGAGACTTAAGGACATCTTAGACTGACTGAACTCTTCTGGATCGCATGTGGACTCACCTAGATACCGTAATACGCTTGTAGACCACCTCACTTAGCTCATGAGGTTGAAGGCCTTTGGGAGTGGTTAGAGCAGGAGCCACAGTCTCTGAATGTCTCCTGGACTCCTGTTTTCTAACTTAATAGAATGGATGAAACATACCGAGCTCTCCAAGCCAGACAGTCCGGCAAATGGTTCACGGTGCAGCGGTCAAAGAGCTTCCCGAAATACATAACACTAAACGGTTTACACTAGCAACATGGCTGTCACAGTTGGCTACCTACAACATTTAAACCAAATTGGCCTTTAAGGAATTTTCCCCCTCCCCAACTTTGTAACCGAGGCTCACATGTATGTGAAAGTTCAGTGTTATAGAGGGGGAAATGGAACTAAAGGAGCAGGTGAATGTTTGGtcggttcagtgtcttgctgcTGAAGCCTGACTTTGGGACTCCACAGCGACAGAATGACCACTTCAACCACCAAAGCCACCCAATGTCTGGCGCTACTTCACGATCAATTTGCAAGCCAATCTACTCCGTTTTGGTGAAAAATGCATTACACCATGTCTGTCATCGCTGAAGGAACttttccatattttttttttttatgttttctattttcAAGATGTTGAAATAACCAGCGTGTCTTGTTACTGCCAATTCATAGTTTTACTGTGAacgtttttgtttgttttttcgttCGGGTTttcaatctgttcaatctgGCGCTTTTGTGATTGTAGGGTTCCGATTCCTCACTTTAATGCCTATTTATAATTTAGATTcttttaatcctttttttttttttttttttttttatctcaaattATACTTTTGTCTTAATTAGGCCAATTTCCCCCCCCTGGAATAGGTGCCTAGCTTTGACCGATGCCTTTTTTTTCGTGTATGATGTCATTATGTTGAAAGGGTCATTAAATCCAGGACCTCCAGAAACGCAGTCAGTAAATTTATTTCTGCGGGACGTCTGAGTCAGTGTTGGATGCGAGATCTGTTGATGTGATGCAGCTGTAGTCAGCAGCTGACGCTCATTAGCTAATGCACGAAGGGATGTCGACTCAGGATGAATTAGCTACAATGCAATAGTACTGCATTTCTCAGGCTGTTGTATGGGAGTGATTGGTCATTTATAGCGGCTGCTGTAGTGATTAGCCCAAGTGATGGTTTGGCTAGGTTGTGTGATGACggggcatttttttttctgtttaaataaaaaaaaaaa

Function

symbol description
pigo Predicted to enable mannose-ethanolamine phosphotransferase activity. Predicted to be involved in GPI anchor biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum membrane. Orthologous to human PIGO (phosphatidylinositol glycan anchor biosynthesis class O).

NR:

description
GPI ethanolamine phosphate transferase 3

GO: NA

KEGG:

id description
K05288 PIGO; GPI ethanolamine phosphate transferase 3 subunit O

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780753.1 False 3471 mRNA 0.63 11 12163789 12173384
XM_039780754.1 True 4593 mRNA 0.57 9 12162293 12172876

Neighbor

gene id symbol gene type direction distance location
phf24 phf24 coding downstream 48228 12077578 ~ 12114065 (-)
prkab1a prkab1,LOC103357303 coding downstream 93874 12057731 ~ 12068419 (-)
LOC120544995 LOC103357302,LOC104927697 coding downstream 105681 12054684 ~ 12056612 (-)
LOC120544994 LOC103357302 coding downstream 108714 12052635 ~ 12053579 (-)
rxraa rxra,LOC102786191,LOC102297781 coding downstream 744641 11183862 ~ 11417652 (-)
LOC120546050 stoml2 coding upstream 1999 12175383 ~ 12184483 (-)
stbd1 NA coding upstream 138852 12312236 ~ 12318795 (-)
musk musk coding upstream 249450 12422834 ~ 12467165 (-)
si:busm1-57f23.1 NA coding upstream 316867 12490251 ~ 12497952 (-)
galt galt,LOC102780609 coding upstream 1181804 13355188 ~ 13386974 (-)
G174341 NA non-coding downstream 395833 11766230 ~ 11766460 (-)
G174335 NA non-coding downstream 415873 11746071 ~ 11746420 (-)
G174327 NA non-coding downstream 501431 11660525 ~ 11660862 (-)
G174325 NA non-coding downstream 502469 11659436 ~ 11659824 (-)
G174324 NA non-coding downstream 540633 11621447 ~ 11621660 (-)
G174403 unc13b,LOC102798935 non-coding upstream 81434 12254818 ~ 12255275 (-)
G174430 NA non-coding upstream 114030 12287414 ~ 12342288 (-)
G174443 lpar1 non-coding upstream 235940 12409324 ~ 12416934 (-)
G174481 NA non-coding upstream 392318 12565702 ~ 12569571 (-)
G174482 NA non-coding upstream 453823 12627207 ~ 12627427 (-)
LOC120545042 NA other downstream 997799 11153767 ~ 11164494 (-)
adra1ab LOC104947653,LOC100705829 other downstream 1766549 10378956 ~ 10395744 (-)
gtf3c4 gtf3c4,LOC102793669 other downstream 2054004 10097251 ~ 10108289 (-)
grin1a grin1a,LOC107600932,LOC103389281,LOC105024190,LOC106513393,LOC100534577,LOC101475684,LOC104936329,LOC102201489,LOC102777117,LOC102302700 other downstream 2259286 9861001 ~ 9903007 (-)
G174120 NA other downstream 2318794 9842812 ~ 9843499 (-)
G174439 NA other upstream 183544 12356928 ~ 12357890 (-)
G174442 lpar1 other upstream 217171 12390555 ~ 12391484 (-)
tmem267 tmem267 other upstream 457841 12631225 ~ 12637494 (-)
cntfr cntfr,LOC108232720,LOC103473535 other upstream 472902 12646286 ~ 12918560 (-)
ier3ip1 ier3ip1,LOC106633120,LOC102779563,LOC104954869 other upstream 1267896 13441280 ~ 13444079 (-)

Expression


Co-expression Network