LOC120546050 (stoml2)


Basic Information

Item Value
gene id LOC120546050
gene name stoml2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 12175383 ~ 12184483 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780806.1
TTGCACCACTGATGTAACTTTCATTTCCTGACTGGTAAGGGTCATTACATTATGAGCCCAGAGTTTGTGTAGAGTCCGGTCTACGAAGCTGAACCGTCCTTTCACAATCACTGAACTTCATGAAATGATGTTACGAACGCTGTGTCGGACCGGCGGGGCCCTTCTTCAGCAAACCCAGCGGGCCGCGCCCCGGTTGTGGGTTACGCCCGCCCAGCAGCGATGGGCGTCCAGCCTGCCCATGAACACCGTGGTCCTGTTTGTGCCCCAGCAGGAAGCCTGGGTGGTGGAGAGAATGGGTCGCTTCCACCGGATCCTAGAGCCGGGTCTGAACTTCCTCATACCCATACTTGACCGAGTGCGCTATGTGCAGAGTCTCAAAGAGATTGTCATTGATGTGCCGGAGCAGTCTGCAGTATCTCTAGATAATGTAACACTACAGATCGATGGAGTGCTTTACTTAAGGATCCTAGACCCTTTTAAGGCCAGTTACGGTGTCGAGGAGCCAGAATATGCCGTGACACAGTTGGCGCAGACCACCATGCGTTCAGAATTAGGCAAACTCACACTGGACAAAGTCTTCAGGgaaaGGGAGTCCCTCAATTCCAACATCGTCCACTCCATCAACCAGGCTTCAGATGAGTGGGGGATCCGCTGCCTCCGTTATGAAATCAAAGATATACACGTTCCACCTCGTGTCAAGGAGTCCATGCAGATGCAGGTGGAGGCCGAGCGTAAGAAGAGAGCCACGGTGTTGGACTCTGAAGGGATGAGGGAAGCGGCCATCAATGTCGCTGAGGGTCAGAAACGAGCTCAGATTCTGGCCTCGGAGGGTGAAAAAGCAGAGCAGATCAATAAAGCAGCTGGTGAGGCCCAAGCAGTTCTGGCCAGAGCAGAGGCAAAAGCTAAGGCTATCTGTATGCTGTCAGAGGCTCTGACCCAGCAGAACGGAGATGCGGCAGCCTCGCTGAGTGTAGCCGAGCAGTATGTGTCTGCTTTCTCCAAACTCGCCAAAGAGTCCAACACCATCCTCCTGCCCTCTAATACCGGGGACATGAGCGGAATGATCACACAGGCTATGACCATTTACAGCACCATGGCAAAGAAGGGTCCAAACGTACCAGAAGCGGCGCAGCTGAAGAGTGAAGACCATGCGAACCAATCATCTCAATAGCAGAGGACTCGGCGAATGAACTCAAAGCAGTAAAATGTCACCGAAGCAGAAAACAGTTACGGGGAGCTCCAAAGGCATCGCTGTGTGATGATCACAATACCCCCTCTACTGACCGGACAGGAAAACTATCACCTTTACTAACTCCTGGGATGTTTTTCCTTGGAGTCTCGGGtggaaaaaacactttttttgaaaGAGGATTTTTAATCTTCGCTGTATATTTATGTTCAGATATTGTCAGATTGGAAAGTTAACACCAGCCTTCGGCCAAATATACTCACACCAGTGACTTCGGCAGGCTGACAAAACGGAGAAATTGATGACAGGTTTTGGGAGTTATCAGCTACTTGTGGACAGTCGATGCAGGAATAAGCCCTGGGTGTATGATTTATAAGTCCTTTGTGGGCAATTTCTGTTGTGCATCAGATCTGTTGCGTGTGGTTTGTATTTTTGCATAAACCCTATTAGAATTGGATGTAAAGGTTTTTTAATTTTACCGCTCTACTTCAAAATTTAAGTGAATCACGCGACTATTTAGAATTTTTGGAGCTTGTTTTTCAGGGCTGGCCAACGTTAGCTCCGGAGCCATCTGCTTTGTTACGGCTTGTTTACAGACATCGACAAATTCTTCAACTGTCTTCAGCGTCATTGGGACCAGCAACTTCAAATTGCTACATGCGATGCAACGAAATGGTGAAAGATTCCTCAAAGTGTAGTTAATTCACAACTTGGCCCCGGTGTTTGACTGAAACCTCTCCCCGAAAAAAAGCTAATCTATTATTTATTTAGgaatattttctgatattattTCATAAACAATTCCTTCTCGATTACTAGTTAGTATACAAAGACGTCCCTCAGAACAAATGTTCCTGCCATCTTCATATTTATATTCACCTCGTATGTCTTCTGGAAAATATGTAGTCAATTTCTTGGTTCTCTGCAAAGATGGCAAGTTTGTCATGTCATAGGCTTCATTGGTGTTTACAggtttataataaataatgcaaaaatTAAATTGGTGTCATTTGAGAGACAAGTAAAGAGATTTCAGTAAATGTATGCCTTGGTGGAATGAGAAGTTGTAAAGCACTTGTTTGGAAATATACAATTATGTTCGAGGACGATATGTGTAAAACGATGAACAACTGCAACTCAAATGTAATGTTTGGAAAACCTTGACTGGTGATGAAGAAAAACTCCAAGTAGGATTTGAAAAAGGATGTTAAAGTTGAACTCCATGTTTTGGGTCACTGTTTgccatcaaataaaaaaaaaagacacggGTTCA

Function

symbol description
stoml2 Predicted to be located in membrane. Orthologous to human STOML2 (stomatin like 2).

NR:

description
PREDICTED: stomatin-like protein 2, mitochondrial

GO:

id name namespace
GO:0042776 mitochondrial ATP synthesis coupled proton transport biological_process
GO:0007005 mitochondrion organization biological_process
GO:0006851 mitochondrial calcium ion transmembrane transport biological_process
GO:0050852 T cell receptor signaling pathway biological_process
GO:0045121 membrane raft cellular_component
GO:0005739 mitochondrion cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780806.1 True 2462 mRNA 0.45 10 12175383 12184483

Neighbor

gene id symbol gene type direction distance location
pigo pigo coding downstream 1999 12162293 ~ 12173384 (-)
phf24 phf24 coding downstream 61318 12077578 ~ 12114065 (-)
prkab1a prkab1,LOC103357303 coding downstream 106964 12057731 ~ 12068419 (-)
LOC120544995 LOC103357302,LOC104927697 coding downstream 118771 12054684 ~ 12056612 (-)
LOC120544994 LOC103357302 coding downstream 121804 12052635 ~ 12053579 (-)
stbd1 NA coding upstream 127753 12312236 ~ 12318795 (-)
musk musk coding upstream 238351 12422834 ~ 12467165 (-)
si:busm1-57f23.1 NA coding upstream 305768 12490251 ~ 12497952 (-)
galt galt,LOC102780609 coding upstream 1170705 13355188 ~ 13386974 (-)
hdhd2 hdhd2 coding upstream 1247126 13431609 ~ 13439708 (-)
G174341 NA non-coding downstream 408923 11766230 ~ 11766460 (-)
G174335 NA non-coding downstream 428963 11746071 ~ 11746420 (-)
G174327 NA non-coding downstream 514521 11660525 ~ 11660862 (-)
G174325 NA non-coding downstream 515559 11659436 ~ 11659824 (-)
G174324 NA non-coding downstream 553723 11621447 ~ 11621660 (-)
G174403 unc13b,LOC102798935 non-coding upstream 70335 12254818 ~ 12255275 (-)
G174430 NA non-coding upstream 102931 12287414 ~ 12342288 (-)
G174443 lpar1 non-coding upstream 224841 12409324 ~ 12416934 (-)
G174481 NA non-coding upstream 381219 12565702 ~ 12569571 (-)
G174482 NA non-coding upstream 442724 12627207 ~ 12627427 (-)
LOC120545042 NA other downstream 1010889 11153767 ~ 11164494 (-)
adra1ab LOC104947653,LOC100705829 other downstream 1779639 10378956 ~ 10395744 (-)
gtf3c4 gtf3c4,LOC102793669 other downstream 2067094 10097251 ~ 10108289 (-)
grin1a grin1a,LOC107600932,LOC103389281,LOC105024190,LOC106513393,LOC100534577,LOC101475684,LOC104936329,LOC102201489,LOC102777117,LOC102302700 other downstream 2272376 9861001 ~ 9903007 (-)
G174120 NA other downstream 2331884 9842812 ~ 9843499 (-)
G174439 NA other upstream 172445 12356928 ~ 12357890 (-)
G174442 lpar1 other upstream 206072 12390555 ~ 12391484 (-)
tmem267 tmem267 other upstream 446742 12631225 ~ 12637494 (-)
cntfr cntfr,LOC108232720,LOC103473535 other upstream 461803 12646286 ~ 12918560 (-)
ier3ip1 ier3ip1,LOC106633120,LOC102779563,LOC104954869 other upstream 1256797 13441280 ~ 13444079 (-)

Expression


Co-expression Network