nek6 (LOC102297357,LOC102792581,LOC100704402,LOC104936759,LOC101471322)


Basic Information

Item Value
gene id nek6
gene name LOC102297357,LOC102792581,LOC100704402,LOC104936759,LOC101471322
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 533379 ~ 564782 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780833.1
tgtgtgtgtctgtgggggaGTTGCACAACAGCAGCAGGAGGGACCAGTCCTGTGTGAAGGGTTTGCAGTGAGCAGCAGGACAGAACTGACTCCTCTAAGGAGGGTGGGTGGGATGCTACAATGGAGGCTCAGAACATCAAGCAGCCCGCCTTGGACAACCACAACAATCTGTACAAAACCCCTGGTCAGGAGGAACAGAGAAGCGTGCCCAGCTGTAAGTACTGCTGCACTCTGGCCAACCTGCGGATTGAGAAGAAGATCGGCCGGGGCCAGTTCAGTGAGGTGTACAAAGCCACGTACCTGCTGGAGGGACAGCTGGTCGCACTCAAGAAAGTCCAGATCTTTGAGATGATGGATGCCAAGGCTCGCCGGGACTGCATCAAAGAGATAGATCTACTAAAGCAGCTCAATCACCCCAACGTGATTAAATACCTCGACTCCTTCATCGAAGACAACGAGCTCAACATCGTTCTGGAGCTGGCAGACGCTGGAGATCTGTCACAGATGATAAAGTACTTCAAGAAGAAGAGGCGCCTGATCCCAGAGAGGACCATATGGAAATACTTTGTGCAGCTGTGCAGCGCCCTGGAGCACATGCACTCACGCAGAGTCATGCACCGAGATATCAAGCCAGCCAACGTGTTCATAACAGCCACAGGCGAGGTGAAGCTGGGGGACCTGGGATTAGGCCGCTTCTTCAGCTCCAAAACCACTGCAGCACACTCTTTAGTGGGGACGCCGTACTACATGTCACCAGAGAGGATCAATGCCAACGGATACAATTTTAAGTCTGACATCTGGTCCCTGGGATGTCTTCTGTACGAGATGGCGGCGCTGCAGAGTCCCTTTTATGGGGACAAGATGAATCTGCTGTCCCTCTGCCAGAAGATTGAGCAGTGTGATTACCCCCCCCTCCCAGCTGACCATTACTCTGACAAGCTGCGGGGCCTGGTAAGTATGTGCATCAAGCCAGAGCCAGACCAGCGGCCGGACATCGTTTTCGTGCTGCAGATCGCCAAACAGATGCATACGTGGACGTCCAGCACCTGAGCGCCATTTCTGCTCCACGCTTCCCGTCTGCTCAGTCTGAGCTTGGCTCAGCTTGCACAAAACGCTTTGCCTTTCCCTCCTCTGGACAGGAGGAAGTCCTGGAAAGACATGCACTCCCACTTATTTTCTGTCTTGGAGGATGAAGAGTTGTGTTAATGCTGTAGCTCTCGGGGAAAGTGGAGCTCAATGTTTTTTGAGCTGAGGACAGACAGCTGTGACTCACTCTGACCACAGATCCTCTCTGCTGATTCATTCCACACTCCGGCTCTGGGTCTGTGGGTCAGCTGAGATTGAGAATCTGAATATCTATCATCTATTATTCTAATCaaaatttttcttttacattgtCAATTTAAGTCCATCGAGTAGagaattgtattgtattgtagaAATGTATTAGCGATTACTAAGTGAGAATGCAGCTTTGCCTCACTGTCAGCTTGCAGGGGAGATCAGCCCAACAACCTGATGTGAATACATATGTATTTATTGATTAATTTCTATCTATCAGAGTAAGGTCTTCTGTGTGGAAGCCAGGGGGGCTGTGGTGGTGTCAGGGCTGTGCAGGTTTGGACCAACAGGCAGAGACTGCAACAGGCAGGATCCAGCAGCTAAAGATTAAACTAGTCTTCTCCATGACTAGACAGCTGATACAGGCTGACCGTGAGGAGCAACACAGGGCACAGTGGCAAACAAACCGACGTACAACTCAAAGAACCAATCAGCAGCAGCAATAAGAAGAGAAACACTGATTGGGTAACGAGACGACACAAACGCAGGCTGACGAGGCTCGACACCAAACAGGTGGAcaagggaagacatgcagggcGGAGCTACAGGGACACAGAATGGACAGACAGGGCCAGCACAGAAAACTGAAACACAATGACCACAACGCGGAACATCCTAGAGACTTCACTCTCTCATCATTTCATTATCTTCAGGTTGTAAAGCTCTTTACGTAGCTTTTGCCAAAACAGACTATCAATGGACTTAATAGTCTTGATTCAAGGTCCACTCACAACCGTTTTCCAGAGCTTTCAGCCAAATGTCTTGGTCTTCTTTTGAGAAGGACTTGTCTTTGTCTCATTGTGAAGTCGTTGTCCTTGCTCCCGAATGGAAGACTCCCAAACTGGGCCAACCTTTTGACTCTTAGCTCACTATATTTTGAATTTGTTACGATTTTTATGTCACCTAAATACTTTAGGATAGTGGATGTAAGAAGGAAAACATCATAAACCATTTTTTTGTAAGTCATCATTAAACGGCCCAGTATTGATTGCAGTTCCTGattctgtgtttctgtgagaTCACGTCGACCTTTGTTACTGTCAAACTTTGAGAGAGATAAGATGCTGTAAGAGTCAATGTTATAATACAAGATATGAAACAAGAATATGTTTTAAGATGTCAGCAGCTCATAATGGACCGTGCCTCATCATACAGAACAGCTGAACATTATTTTTGACAGCTTGTATTCTATGCCGATATAATACATGTTTTCTATATCCAGGAGGGGAGAGGTTTCGTCATGTCCAGTTTGTTCATCTTCCTACTGTGCAGTCGATTTGTGCCATTATGTTTGTTCCAACATGACATTAAATGTAGCTCTGTGAAGTCA
>XM_039780834.1
tgtgtgtgtctgtgggggaGTTGCACAACAGCAGCAGGAGGGACCAGTCCTGTGTGAAGGGTTTGCAGTGAGCAGCAGGACAGAACTGACTCCTCTAAGGAGGGTGGGTGGGATGCTACAATGGAGGCTCAGAACATCAAGCAGCCCGCCTTGGACAACCACAACAATCTGTACAAAACCCCTGGTCAGGAGGAACAGAGAAGCGTGCCCAGCTGTAAGTACTGCTGCACTCTGGCCAACCTGCGGATTGAGAAGAAGATCGGCCGGGGCCAGTTCAGTGAGGTGTACAAAGCCACGTACCTGCTGGAGGGACAGCTGGTCGCACTCAAGAAAGTCCAGATCTTTGAGATGATGGATGCCAAGGCTCGCCGGGACTGCATCAAAGAGATAGATCTACTAAAGCTCAATCACCCCAACGTGATTAAATACCTCGACTCCTTCATCGAAGACAACGAGCTCAACATCGTTCTGGAGCTGGCAGACGCTGGAGATCTGTCACAGATGATAAAGTACTTCAAGAAGAAGAGGCGCCTGATCCCAGAGAGGACCATATGGAAATACTTTGTGCAGCTGTGCAGCGCCCTGGAGCACATGCACTCACGCAGAGTCATGCACCGAGATATCAAGCCAGCCAACGTGTTCATAACAGCCACAGGCGAGGTGAAGCTGGGGGACCTGGGATTAGGCCGCTTCTTCAGCTCCAAAACCACTGCAGCACACTCTTTAGTGGGGACGCCGTACTACATGTCACCAGAGAGGATCAATGCCAACGGATACAATTTTAAGTCTGACATCTGGTCCCTGGGATGTCTTCTGTACGAGATGGCGGCGCTGCAGAGTCCCTTTTATGGGGACAAGATGAATCTGCTGTCCCTCTGCCAGAAGATTGAGCAGTGTGATTACCCCCCCCTCCCAGCTGACCATTACTCTGACAAGCTGCGGGGCCTGGTAAGTATGTGCATCAAGCCAGAGCCAGACCAGCGGCCGGACATCGTTTTCGTGCTGCAGATCGCCAAACAGATGCATACGTGGACGTCCAGCACCTGAGCGCCATTTCTGCTCCACGCTTCCCGTCTGCTCAGTCTGAGCTTGGCTCAGCTTGCACAAAACGCTTTGCCTTTCCCTCCTCTGGACAGGAGGAAGTCCTGGAAAGACATGCACTCCCACTTATTTTCTGTCTTGGAGGATGAAGAGTTGTGTTAATGCTGTAGCTCTCGGGGAAAGTGGAGCTCAATGTTTTTTGAGCTGAGGACAGACAGCTGTGACTCACTCTGACCACAGATCCTCTCTGCTGATTCATTCCACACTCCGGCTCTGGGTCTGTGGGTCAGCTGAGATTGAGAATCTGAATATCTATCATCTATTATTCTAATCaaaatttttcttttacattgtCAATTTAAGTCCATCGAGTAGagaattgtattgtattgtagaAATGTATTAGCGATTACTAAGTGAGAATGCAGCTTTGCCTCACTGTCAGCTTGCAGGGGAGATCAGCCCAACAACCTGATGTGAATACATATGTATTTATTGATTAATTTCTATCTATCAGAGTAAGGTCTTCTGTGTGGAAGCCAGGGGGGCTGTGGTGGTGTCAGGGCTGTGCAGGTTTGGACCAACAGGCAGAGACTGCAACAGGCAGGATCCAGCAGCTAAAGATTAAACTAGTCTTCTCCATGACTAGACAGCTGATACAGGCTGACCGTGAGGAGCAACACAGGGCACAGTGGCAAACAAACCGACGTACAACTCAAAGAACCAATCAGCAGCAGCAATAAGAAGAGAAACACTGATTGGGTAACGAGACGACACAAACGCAGGCTGACGAGGCTCGACACCAAACAGGTGGAcaagggaagacatgcagggcGGAGCTACAGGGACACAGAATGGACAGACAGGGCCAGCACAGAAAACTGAAACACAATGACCACAACGCGGAACATCCTAGAGACTTCACTCTCTCATCATTTCATTATCTTCAGGTTGTAAAGCTCTTTACGTAGCTTTTGCCAAAACAGACTATCAATGGACTTAATAGTCTTGATTCAAGGTCCACTCACAACCGTTTTCCAGAGCTTTCAGCCAAATGTCTTGGTCTTCTTTTGAGAAGGACTTGTCTTTGTCTCATTGTGAAGTCGTTGTCCTTGCTCCCGAATGGAAGACTCCCAAACTGGGCCAACCTTTTGACTCTTAGCTCACTATATTTTGAATTTGTTACGATTTTTATGTCACCTAAATACTTTAGGATAGTGGATGTAAGAAGGAAAACATCATAAACCATTTTTTTGTAAGTCATCATTAAACGGCCCAGTATTGATTGCAGTTCCTGattctgtgtttctgtgagaTCACGTCGACCTTTGTTACTGTCAAACTTTGAGAGAGATAAGATGCTGTAAGAGTCAATGTTATAATACAAGATATGAAACAAGAATATGTTTTAAGATGTCAGCAGCTCATAATGGACCGTGCCTCATCATACAGAACAGCTGAACATTATTTTTGACAGCTTGTATTCTATGCCGATATAATACATGTTTTCTATATCCAGGAGGGGAGAGGTTTCGTCATGTCCAGTTTGTTCATCTTCCTACTGTGCAGTCGATTTGTGCCATTATGTTTGTTCCAACATGACATTAAATGTAGCTCTGTGAAGTCA

Function

NR:

description
serine/threonine-protein kinase Nek6-like

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K20875 NEK6; NIMA (never in mitosis gene a)-related kinase 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780833.1 True 2671 mRNA 0.47 10 533379 564782
XM_039780834.1 False 2668 mRNA 0.47 10 533379 564782

Neighbor

gene id symbol gene type direction distance location
LOC120545827 NA coding downstream 74103 458084 ~ 459276 (-)
mapkap1 mapkap1,LOC102781088 coding downstream 191002 302496 ~ 342377 (-)
LOC120546082 LOC103362445,LOC102082667,LOC102197263,LOC102301125,LOC101469328 coding downstream 348596 144208 ~ 184783 (-)
LOC120545215 NA coding upstream 31111 595893 ~ 621737 (-)
crb2a NA coding upstream 60178 624960 ~ 659720 (-)
slc12a2 NA coding upstream 187630 752412 ~ 846977 (-)
slc27a6 slc27a6 coding upstream 319087 883869 ~ 951206 (-)
lmnb1 lmnb1 coding upstream 402217 966999 ~ 987881 (-)
G171680 NA non-coding downstream 14309 518840 ~ 519070 (-)
G171674 NA non-coding downstream 53228 479794 ~ 480151 (-)
G171636 NA non-coding downstream 238094 295066 ~ 295285 (-)
LOC120546083 samd3,LOC101476819 non-coding downstream 461581 71010 ~ 71798 (-)
G171718 NA non-coding upstream 2237 567019 ~ 567342 (-)
G171719 NA non-coding upstream 5519 570301 ~ 570904 (-)
G171728 NA non-coding upstream 34764 599546 ~ 600048 (-)
LOC120545599 fbxw2 non-coding upstream 107690 672472 ~ 745412 (-)
G171792 NA non-coding upstream 315796 880578 ~ 880789 (-)
prrc1 prrc1 other upstream 429655 994437 ~ 1008188 (-)
megf10 megf10 other upstream 476016 1040798 ~ 1146587 (-)
G171868 NA other upstream 605421 1170203 ~ 1170789 (-)
G172032 NA other upstream 1031734 1596516 ~ 1602156 (-)
G172311 NA other upstream 2420040 2984822 ~ 2985260 (-)

Expression


Co-expression Network