scpp8


Basic Information

Item Value
gene id scpp8
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 7635420 ~ 7640489 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780870.1
TGTCCAGGCATCATATATGAGGAGCAGCCAGTCTTGCATAGAGGTCAGCCGTCTTTCTGCACCGAAACTGAGAGTAATCACAGCTGTACAGAATCCCATCGATCTCATTTAGGATTTAAGAGAAGTAAGAAAAAACGAGACAAAAGATCTGGTGCTACAGATAATTGACCAAACCCAATCAGAGATGAAGCTTCTGACAACCGCCCTCGTCATCGTTCTTCTGTCTACAACAGCCTCCGCTAAGCCGAGTGGTTCGCGTCGGCATCATGACGCTGACATCCCTGACAACGACTTGATACAGGGACGGCGGGAAGGGAGTAACAGGCGGTCTCAGGGGTCTAGCGAATCTTCTAGCGACGAAGACTCGTCATCAGAGTCGAGTCAGTCACGGGAATCTAGCGAGTCTTCAGAAAGTCAATCTTCGGAGGAGTCCTCGGAGGAAGTCAGGGATCTGACCACTACAGTCGTGCCCACCACTGCCATGAGAACCGTTACTACAGTAGAAGGGAGTACACCCACCTCTGGGCCAGACACGATGAGTACAGACGAGCCAACTGTGACAAGGACAACACCCCCACCAGCAACACCGACCACACCCATTGTTGCCACGTCAACTGGCAGTGTGACTGATTGTGTTACCGTGGATATTCCAACAGCTCCTCCCGTCACAGAAAACAGAGGAGACAACTAAAAAACCGTCATTCCTGTTAACCGACTGCAAACAACAGCTAACCACATGCCTATTTAAAATGCGTAGTTTTCTGTGTGTAGTTGCAAAAGTTAAATCTTTATAAATTCTTAAACAAAAAGGGCAACATGCAAGTACTTAATGAGGCCAGTTTTAAATTAGAAGATCATCTAGACCAGTGTTCCTTAAACTTTTCTTAGACCATGGACCACTTACTCAATACAAAAAAATTCCCAGACCACCTAACTGCCAAAGTATCCCCAAAAACAATAGGCCAGATGAAATGTCAGTTTTGCTAACCGATTGCCTTTGTTGCTATCTTAATGAGGAAGAATGATGCCGCGTATGCTGAGACATCACAGAAGCAATGTCTACATTTAGCCATCAATCAATCTTGTCAGTTGACAATAACCGTGAACTTTATCTCTCCGTATTTCCTGTAAATGTCACGCTGATCATTTGCGATGTAAATTGAAGGCAGTGTCGCAAAACGGTCGGCTGCATTGCTGAAGTCCGACAACACCGCAAAATAGCCAATTTGACAAATGAGTTAAGATTTaatattggggaaaaaaaacatctatgcTCCTGACTATTAAGGCATCTACACATGATAAGCGATTTGCTCTCTGCGCACTGCTAGGTAGGGCGCAGCGCAGGTATTCGTCATCAAGGATGGCAAGGAAGCGATTTCCCGTTGCTAGGTAAAGACAGCTGTTATCTCATTGGTTACGCTTTCAAAAGGTCTGCGGcaactaggtcaaagttgaaataatttcaaCTTTGCGCGCAGCGCACAGCGGCAAATCCGAGCTCTCCTCATAATCAATGGAACGGCCGGCGCAAAGCGGTTTTGCCGCTTATCATGTGTAGGCAGCTTTAGGTTTCAGAGAAGATGGCATTTATTATTTgaattttattaaaaacatgatATTTGACCAAATCTGCTCGCGGACGACTCTTTGAGAAATAATATTATTCAATAATAGTATCACTAACTGCCTCAAGATACACATCCTTTAATTACCACTAGATGCTTTACCCAAAAATTTTATATTAAAGgccatttttgaaaaaagtttttttttaaatgcattttgtttgaaatgtatatttgttgtattattaagattacattgttttttttccatattgACCTGCAGTGTTTTAGCCATCAAATAGTGATGCTACAGAGCAGCTTTCACACAGACCAGAACACATATATGTTGAagcctctgaacacacacacacacacacattgaaggGAATTAATTAGGTGACACATTTTTCCtgccctaacaggtgcaacaaagcTAACAGGAGAAGATTTCAATCAAtgaaacacacccacacagtcctgggaagaggtctaatcagccagattaCATGGAAACACGTGGGCGTTCAGAGCCTTAAATATATGGTAATATTATGTACACAAATCTGTAGCTCAGTTATGTTTACCAAAGTATTAACTGATCAGGAAAGTACAGGCAAGATACTCTGCAAGATTTCTGCACAAGCTTAAAACAGGTACATATTTATATTACAGTGGAATAAAAAGTCACCCGTCTGTATGAAGCATCCAGACTATTTATCCCACAGCAGTGGTTTCATAGACTGTGGAGGGTGTGTCTTGTTTGTCTCATTCAGCAAGCCTTGCAAGACAAACTGAGTTATTGCCCACAAGTGTTGGTGTAATTATGGGTTGTGAATATTTTCCCAAATAAAATATGGCTTTGAAGgctcaaaacaaaacatggatgttgtttgttttgtgcgtTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780870.1 True 2476 mRNA 0.42 3 7635420 7640489

Neighbor

gene id symbol gene type direction distance location
sh3bp2 sh3bp2 coding downstream 113329 7479129 ~ 7522091 (-)
vldlr vldlr coding downstream 169359 7397054 ~ 7466061 (-)
kcnv2a kcnv2,LOC102778926 coding downstream 241455 7380444 ~ 7393965 (-)
LOC120545581 NA coding downstream 273475 7324542 ~ 7361945 (-)
LOC120544992 NA coding downstream 337499 7295509 ~ 7297921 (-)
parm1 NA coding upstream 23769 7664258 ~ 7680152 (-)
htr1ab LOC103375131,LOC101466473,LOC102210591,LOC100704763,LOC104923798 coding upstream 139799 7780288 ~ 7782476 (-)
c7b NA coding upstream 207235 7847724 ~ 7866608 (-)
gadd45gb.1 LOC102786399,LOC101463858,LOC102303517 coding upstream 306373 7946862 ~ 7948604 (-)
LOC120545849 NA coding upstream 419958 8060447 ~ 8073342 (-)
G173573 NA non-coding downstream 6667 7628541 ~ 7628753 (-)
G173564 NA non-coding downstream 98804 7536365 ~ 7536616 (-)
G173561 NA non-coding downstream 147515 7487597 ~ 7487905 (-)
G173554 NA non-coding downstream 158415 7476541 ~ 7477005 (-)
G173550 NA non-coding downstream 257046 7377127 ~ 7378374 (-)
G173638 NA non-coding upstream 184198 7824687 ~ 7825279 (-)
G173661 NA non-coding upstream 268882 7909371 ~ 7912301 (-)
G173673 LOC107375064,LOC107094677 non-coding upstream 301099 7941588 ~ 7944249 (-)
G173689 LOC104960898,LOC105903926 non-coding upstream 447678 8088167 ~ 8088441 (-)
G173704 NA non-coding upstream 590170 8230659 ~ 8230858 (-)
G173470 LOC103389048,LOC105418623 other downstream 475333 7152870 ~ 7160087 (-)
LOC120546140 NA other downstream 814554 6820812 ~ 6820866 (-)
LOC120544971 NA other downstream 1260931 6368307 ~ 6374489 (-)
LOC120545230 NA other downstream 2234742 5396633 ~ 5400678 (-)
odf2a LOC103374699 other downstream 2738063 4846279 ~ 4897357 (-)
G173727 LOC107687935 other upstream 717234 8357723 ~ 8358027 (-)
LOC120545754 zfand5,LOC102789640,LOC104922891,LOC103362637,LOC102194010,LOC102308986 other upstream 984993 8625482 ~ 8634067 (-)
G173900 NA other upstream 1429673 9070162 ~ 9071208 (-)
G174120 NA other upstream 2202323 9842812 ~ 9843499 (-)
grin1a grin1a,LOC107600932,LOC103389281,LOC105024190,LOC106513393,LOC100534577,LOC101475684,LOC104936329,LOC102201489,LOC102777117,LOC102302700 other upstream 2220512 9861001 ~ 9903007 (-)

Expression


Co-expression Network