Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120544937 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053128.1 |
| NCBI id | CM020925.1 |
| chromosome length | 37416781 |
| location | 20068760 ~ 20069830 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005636606.1 | True | 652 | lncRNA | 0.42 | 3 | 20068760 | 20069830 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| traf2b | traf2 | coding | upstream | 18537 | 20037864 ~ 20050223 (+) |
| bspry | bspry,LOC100703027,LOC102783296 | coding | upstream | 40330 | 20020957 ~ 20028430 (+) |
| LOC120545547 | LOC103368295 | coding | upstream | 98648 | 19963771 ~ 19970112 (+) |
| pax8 | pax8,LOC102780591 | coding | upstream | 124917 | 19929571 ~ 19943843 (+) |
| lman2la | lman2l,LOC108231067 | coding | upstream | 168500 | 19894116 ~ 19900260 (+) |
| bbln | clg14h9orf16,LOC103376136,LOC106518230,LOC103028983 | coding | downstream | 98097 | 20167927 ~ 20170745 (+) |
| dnm1a | dnm1 | coding | downstream | 111915 | 20181745 ~ 20236007 (+) |
| hspa5 | hspa5 | coding | downstream | 192945 | 20262775 ~ 20266809 (+) |
| rgs3a | rgs3,LOC102788614,LOC104953710 | coding | downstream | 207457 | 20277287 ~ 20425401 (+) |
| znf618 | znf618,LOC101485385 | coding | downstream | 388526 | 20458356 ~ 20497767 (+) |
| G176346 | fbxw5 | non-coding | upstream | 6776 | 20055289 ~ 20061984 (+) |
| G176289 | NA | non-coding | upstream | 162637 | 19883987 ~ 19906123 (+) |
| G176292 | mtfp1 | non-coding | upstream | 175981 | 19888869 ~ 19892779 (+) |
| G176287 | NA | non-coding | upstream | 199213 | 19867818 ~ 19869547 (+) |
| G176286 | med13l | non-coding | upstream | 218855 | 19849690 ~ 19849905 (+) |
| G176335 | LOC103376127 | non-coding | downstream | 10021 | 20079851 ~ 20087641 (+) |
| G176357 | fubp3,LOC106522831 | non-coding | downstream | 19276 | 20089106 ~ 20090858 (+) |
| G176410 | NA | non-coding | downstream | 167697 | 20237527 ~ 20241216 (+) |
| LOC120545553 | NA | non-coding | downstream | 367341 | 20437171 ~ 20440566 (+) |
| LOC120545557 | NA | non-coding | downstream | 427992 | 20497822 ~ 20499818 (+) |
| LOC120545241 | LOC105930800,LOC102780299,LOC103149678,LOC107095870,LOC100701678 | other | upstream | 154080 | 19911836 ~ 19914680 (+) |
| LOC120545529 | ermp1,LOC102800265 | other | upstream | 666381 | 19380250 ~ 19402379 (+) |
| srsf9 | srsf9,LOC104958899,LOC100707309 | other | upstream | 1344975 | 18676021 ~ 18723785 (+) |
| LOC120545610 | NA | other | upstream | 1411141 | 18656524 ~ 18657619 (+) |
| cabp7b | cabp7,LOC104925332 | other | upstream | 1417691 | 18635026 ~ 18651069 (+) |
| pappaa | pappa | other | downstream | 445517 | 20515347 ~ 20620786 (+) |
| G176526 | NA | other | downstream | 876854 | 20946684 ~ 20947055 (+) |
| G176753 | NA | other | downstream | 2209050 | 22278880 ~ 22282163 (+) |
| LOC120545252 | NA | other | downstream | 2426583 | 22496413 ~ 22524405 (+) |
| G176870 | cplx4 | other | downstream | 2462078 | 22531908 ~ 22537337 (+) |
