LOC120545017


Basic Information

Item Value
gene id LOC120545017
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 23969257 ~ 23971641 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636617.1
cttttttctctcgaggcatcaacaacacagctaacagCAACAGCAGTCTGGAAGAAAGGGTATCTCAAACTAAGGGAGGACTTTCAACCAGCCAGACGTGAGACACACTGCATTAAGCTGCTTTTCCACTGTGAGGACTGCAGGCAGAGGTTTCATAGCACTGAGATTTGCAGCTTCTGCTGGTCAGCGGGTTTTACTGGTGTCTTTTATCCGTGCATTGTAATACTTTTTATTGGTCTTCCTGCCAGAACTTTATCTTGTGTTTGTAATTTTCTTTTACTGAAATTCTTTTTCAgcttcatttttatttgaaggagCTTTCAGTGGATGCTAACAGCTTTAGAAAAACATGTCTGTGCAGTCCACTGTCTCATATTGAGAAAGAGAAGCATTTATTCTGTAATGATGATAGCTCTGACTTGGTGTGTTAAACTATGTGAGCTCTATTCTTGTACCAAAttattctgtctgtctgatcaAGTGCCTGGTTTTGGGATTATTGTATCTTGCTAACCCTCTTATTTTGCCTCTCTGTTATTCTTCTTTTACATCCTGGACGATGCTTTCTCACAGTCTTTTGCACGTCTGCATCCGCACACCAGAGACTGAAAGATTGATGTACAGACCAGACACTATAAGCACAGTCTGTTTCCAGTGATGTTGTAGCCCGGTCCTTTCCTCACTGCTCAGCTGCTATGTTAGGAATGCTGGACGTGCATCTCTATTGTCTGGTCAAAGGGTCTTCACTCATCTCATTTGGCTCTCATCCATAACAACCTGGCCACTGCAGGGAGAACAGTTCATTTCTTAAAGGGGCACACCAATTTTACACATGAAGATATCCTGATGTCATAAGGAGTATATGCCATCCTGTGAAAACAATTGCATAATGAGGGAGCTTTCGTAAAGTCTAAAATGAATCATCAGGATGACATCATCAACCCCCAGTTTAAAAGATATGACAATTTACCAGTCAGGGAGTGTCTAATGAAAGATGCTATTGAGGTGTATTATGGGAAATATAGGATCCAATGTTTTTGGACCCATTCTAGGGGCTAGAAGTCACAATATATCATCTTTGGTGCTGCTGGAGTACACTAATTCTAAATACAAAAATAGCTTGATTGTTTTAGTTAAGATGTTTTATCCAACATTTGAAGGGTTATTTGTTAATATGTGTGTAATTAGATGTATTTCTTTATGTCAGAAACAGGCTAAACATGAGCAGGAAGCATGAATTAGGCACCCCGTTGTCCTAGGGGTTAGAACGAAGATCATGAATGCTTGTTTCCTGTCATCTCTCAACTATCAGCTGTctaataaaggtaaaaaaaaaatgccctcAACAtcatttgattatttattttaaagaaaacgcCTGAAAATACATTATT

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636617.1 True 1394 lncRNA 0.39 3 23969257 23971641

Neighbor

gene id symbol gene type direction distance location
LOC120545057 LOC104952880,LOC103371326 coding upstream 79271 23888904 ~ 23889986 (+)
LOC120545788 NA coding upstream 129224 23815321 ~ 23840033 (+)
notch1a LOC104924495,LOC103357999 coding upstream 155527 23789882 ~ 23813730 (+)
LOC120545180 LOC103357997,LOC101480866,LOC102079280,LOC106633087,LOC102787376,LOC102204442 coding upstream 211952 23754735 ~ 23757305 (+)
pdcl NA coding upstream 221865 23730918 ~ 23747392 (+)
col27a1a LOC104924507,LOC103371324 coding downstream 18154 23989795 ~ 24063047 (+)
cdk5rap2 cdk5rap2 coding downstream 93301 24064942 ~ 24110814 (+)
dolk dolk coding downstream 157269 24128910 ~ 24131539 (+)
uck1 uck1 coding downstream 186045 24157686 ~ 24161621 (+)
LOC120545253 LOC103390093 coding downstream 352328 24323969 ~ 24394568 (+)
LOC120545826 NA non-coding upstream 32576 23936001 ~ 23936681 (+)
LOC120545825 NA non-coding upstream 33456 23934847 ~ 23935801 (+)
G177284 NA non-coding upstream 249884 23673262 ~ 23719373 (+)
G177244 NA non-coding upstream 432859 23535883 ~ 23536398 (+)
G177177 NA non-coding upstream 542355 23424844 ~ 23426902 (+)
G177452 NA non-coding downstream 167777 24139418 ~ 24150168 (+)
G177487 NA non-coding downstream 428844 24400485 ~ 24400891 (+)
G177488 NA non-coding downstream 429481 24401122 ~ 24401327 (+)
G177493 NA non-coding downstream 432979 24404620 ~ 24405052 (+)
G177494 NA non-coding downstream 433639 24405280 ~ 24405537 (+)
rpl37 rpl37 other upstream 242015 23723478 ~ 23727242 (+)
LOC120546141 NA other upstream 243205 23725974 ~ 23726052 (+)
LOC120546142 NA other upstream 245012 23724166 ~ 23724245 (+)
hnrpkl LOC103364541,LOC100706673,LOC103155138,LOC103473466 other upstream 510652 23440983 ~ 23458605 (+)
G177094 NA other upstream 784995 23182673 ~ 23184262 (+)
dnlz dnlz,LOC104941974 other downstream 183744 24155385 ~ 24157621 (+)
G177596 map1b other downstream 731330 24702971 ~ 24711641 (+)
zgc:63972 cuta,LOC103373665 other downstream 1273921 25245562 ~ 25305032 (+)
G177715 NA other downstream 1561491 25533132 ~ 25533689 (+)
G177759 NA other downstream 1858077 25829718 ~ 25849122 (+)

Expression


Co-expression Network