LOC120545476


Basic Information

Item Value
gene id LOC120545476
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 9337767 ~ 9338418 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636702.1
GCCTGGCAATGAGGGTTTTGTGATCTCTATCAGGGAACACAAGACTAACAAGTCCTTTGGGGTGGCCCAAATGTTCTTAGAGACTGACGAGTTTCGATGGCTGGAGAGGTGGCTGCAGCTGCGGGTGGCCAGCAAGCCACCGAACCAGCTGGTCTTCTTCACGGCTGGGAAGGGCCCATGCTAAAACTTCTTGCACCACCTGCAGGTAGCGTGGGCGGAGATCCGCCTTAAAGGGTCCCCCAACTTCACTGACCTGAGGACTGCTGTGTCTGCTCATGTCAAGAACAACCTTCTGTCGGGCAGCAGAAGATGGTGGCCACCTTTTATGTGCCACAACATGGCCACCGCTGACTGCTTCTACGCCCTCAGCCTGAACGTGGTCCAGTCAAAGAGGATGAGGGAGCATTTCCGCTAGACCTTCACCCACACCGTGCCATCACCGGAGTCACCagaagcctcctcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636702.1 True 464 lncRNA 0.56 3 9337767 9338418

Neighbor

gene id symbol gene type direction distance location
ssna1 ssna1,LOC102792612 coding downstream 481038 8852787 ~ 8856729 (-)
alad alad,LOC102791750 coding downstream 525673 8795830 ~ 8812094 (-)
LOC120545257 npr2,LOC102310518 coding downstream 553425 8699959 ~ 8784342 (-)
pmchl NA coding downstream 672311 8664825 ~ 8665456 (-)
tmc2a LOC105921883,LOC107083736 coding downstream 720803 8590269 ~ 8616964 (-)
stxbp1a stxbp1,LOC101480228,LOC106536584 coding upstream 284007 9622425 ~ 9706925 (-)
slc31a2 slc31a2 coding upstream 383276 9721694 ~ 9732993 (-)
arrdc1b arrdc1 coding upstream 396037 9734455 ~ 9778180 (-)
LOC120544929 LOC102775582,LOC102289500,LOC103364605,LOC106529419,LOC102193727,LOC108241375 coding upstream 443779 9782197 ~ 9792340 (-)
mamdc4 NA coding upstream 460666 9799084 ~ 9831228 (-)
G173944 NA non-coding downstream 39289 9297725 ~ 9298478 (-)
G173943 NA non-coding downstream 40153 9296393 ~ 9297614 (-)
G173942 NA non-coding downstream 52434 9285076 ~ 9285333 (-)
G173941 NA non-coding downstream 53739 9283823 ~ 9284028 (-)
G173940 NA non-coding downstream 54377 9283117 ~ 9283390 (-)
G174116 NA non-coding upstream 457425 9795843 ~ 9796971 (-)
G174139 NA non-coding upstream 706214 10044632 ~ 10045354 (-)
G174143 NA non-coding upstream 749864 10088282 ~ 10088523 (-)
G174166 NA non-coding upstream 856658 10195076 ~ 10284037 (-)
G174168 NA non-coding upstream 898327 10236745 ~ 10239274 (-)
G173900 NA other downstream 266559 9070162 ~ 9071208 (-)
LOC120545754 zfand5,LOC102789640,LOC104922891,LOC103362637,LOC102194010,LOC102308986 other downstream 703700 8625482 ~ 8634067 (-)
G173727 LOC107687935 other downstream 979740 8357723 ~ 8358027 (-)
G173470 LOC103389048,LOC105418623 other downstream 2177680 7152870 ~ 7160087 (-)
LOC120546140 NA other downstream 2516901 6820812 ~ 6820866 (-)
G174120 NA other upstream 504394 9842812 ~ 9843499 (-)
grin1a grin1a,LOC107600932,LOC103389281,LOC105024190,LOC106513393,LOC100534577,LOC101475684,LOC104936329,LOC102201489,LOC102777117,LOC102302700 other upstream 522583 9861001 ~ 9903007 (-)
gtf3c4 gtf3c4,LOC102793669 other upstream 758833 10097251 ~ 10108289 (-)
adra1ab LOC104947653,LOC100705829 other upstream 1040538 10378956 ~ 10395744 (-)
LOC120545042 NA other upstream 1815349 11153767 ~ 11164494 (-)

Expression


Co-expression Network