LOC120545915


Basic Information

Item Value
gene id LOC120545915
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 10365524 ~ 10367785 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636756.1
TGAGCGAAGAGATGAGGCTACTGATTATCTTCTGTGTCGATGTGGCTGGTTCCATCCTGCTTAGCATCGGTGGCTACAGCTGCATGAAGTGCATTTcACGCTGCaataaaaggaaaaaggaaattACGAACAATCATGGAGGAGCACGTACTGAGGTTATATATTCACAGAAAAAGCAGAAGGAGTCTGAGGAACACCCGACACCTCCAGTCCTAGAAGGTGAAGTCTACGTCAAATGCATCTATGCTAAGGGCCGGGGGGGCCACCAAGGCCAGTGCCTATACACCCCTACAAGGTTGGCAGAGTACGGCTGTTAAGGGTATCATCTCCAAACAACTGAAGGAAGCGGCCGGCAAATATAGCAACTTCTGTCAACACATCTCATCTACTGGAAGAAGAAACTACACTTTAGTCACCTAACACATAATTGAATTTGGCCATACAGCACAACACCTATTTGAATTCAATTGTTAGTTCAGAAAACTCACTAGAAAAAAAATGGAGAGTGATCCATTTGATTCTGCAAAATAATAAGTCCTTAGGCTATATATAAGCATCACATAGTCAATAAGTAGCTGGGACAAAGACGAAGACTTGGAGGACGCGCACTGAGGAATCAACGAATCAATAGAAATTGAGACTTTGAAACACTAGGTGCTGCATGACCTTCGTTATCAACTGTGTAATTCATGTAATTTCCATGTTTGTAAAGGTTCATATTAGCTTGCTAAATATACATTATCACCAAAAACAGCATATTCTGCATTGAATATAGGTCTTAAACCTATGAGTGATTGGTTATATATTATCTGTGTGACAAAAGTATAATTAATATAGTTTaaagtttatttcattttagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636756.1 True 860 lncRNA 0.40 3 10365524 10367785

Neighbor

gene id symbol gene type direction distance location
gsna gsn coding downstream 139143 10201066 ~ 10226381 (-)
barhl1b barhl1,LOC100712077,LOC102792687 coding downstream 215521 10143070 ~ 10150003 (-)
gfi1b gfi1b coding downstream 365957 9993598 ~ 9999567 (-)
gtf3c5 NA coding downstream 381499 9972694 ~ 9984025 (-)
LOC120544999 LOC103362077 coding downstream 393674 9966088 ~ 9971850 (-)
si:ch211-127i16.2 LOC103374795,LOC101469412,LOC102289489,LOC100706625,LOC102789715 coding upstream 405072 10772857 ~ 10824728 (-)
vav2 vav2 coding upstream 545929 10913714 ~ 11140925 (-)
rxraa rxra,LOC102786191,LOC102297781 coding upstream 816077 11183862 ~ 11417652 (-)
LOC120544994 LOC103357302 coding upstream 1684850 12052635 ~ 12053579 (-)
LOC120544995 LOC103357302,LOC104927697 coding upstream 1686899 12054684 ~ 12056612 (-)
G174196 NA non-coding downstream 30514 10331327 ~ 10335010 (-)
G174166 NA non-coding downstream 81487 10195076 ~ 10284037 (-)
G174168 NA non-coding downstream 126250 10236745 ~ 10239274 (-)
G174143 NA non-coding downstream 277001 10088282 ~ 10088523 (-)
G174139 NA non-coding downstream 320170 10044632 ~ 10045354 (-)
G174210 NA non-coding upstream 10809 10378594 ~ 10378853 (-)
G174233 NA non-coding upstream 135192 10502977 ~ 10504576 (-)
G174245 NA non-coding upstream 142801 10510586 ~ 10513636 (-)
G174246 NA non-coding upstream 148869 10516654 ~ 10547971 (-)
G174309 NA non-coding upstream 809728 11177513 ~ 11179509 (-)
gtf3c4 gtf3c4,LOC102793669 other downstream 257235 10097251 ~ 10108289 (-)
grin1a grin1a,LOC107600932,LOC103389281,LOC105024190,LOC106513393,LOC100534577,LOC101475684,LOC104936329,LOC102201489,LOC102777117,LOC102302700 other downstream 462517 9861001 ~ 9903007 (-)
G174120 NA other downstream 522025 9842812 ~ 9843499 (-)
G173900 NA other downstream 1294316 9070162 ~ 9071208 (-)
LOC120545754 zfand5,LOC102789640,LOC104922891,LOC103362637,LOC102194010,LOC102308986 other downstream 1731457 8625482 ~ 8634067 (-)
adra1ab LOC104947653,LOC100705829 other upstream 11171 10378956 ~ 10395744 (-)
LOC120545042 NA other upstream 785982 11153767 ~ 11164494 (-)
G174439 NA other upstream 1989143 12356928 ~ 12357890 (-)
G174442 lpar1 other upstream 2022770 12390555 ~ 12391484 (-)
tmem267 tmem267 other upstream 2263440 12631225 ~ 12637494 (-)

Expression


Co-expression Network