Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120545949 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053128.1 |
| NCBI id | CM020925.1 |
| chromosome length | 37416781 |
| location | 3159271 ~ 3167356 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005636762.1 | True | 437 | lncRNA | 0.45 | 3 | 3159271 | 3167356 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dcc | dcc,LOC102787302 | coding | downstream | 351807 | 2469175 ~ 2807464 (-) |
| dcp2 | dcp2 | coding | downstream | 879460 | 2253897 ~ 2279811 (-) |
| LOC120545833 | NA | coding | downstream | 906316 | 2179488 ~ 2252955 (-) |
| hmgcs1 | hmgcs1,LOC107394923,LOC105917111,LOC102790295 | coding | downstream | 1000220 | 2145367 ~ 2159051 (-) |
| tln1 | tln1,LOC100711808 | coding | downstream | 1086165 | 1948903 ~ 2073106 (-) |
| mbd2 | mbd2,LOC100708236,LOC103373628 | coding | upstream | 1270 | 3168626 ~ 3246890 (-) |
| LOC120545955 | NA | coding | upstream | 110193 | 3277549 ~ 3281952 (-) |
| june | LOC100707786,LOC102781123,LOC101463670,LOC102205300,LOC105936581 | coding | upstream | 296546 | 3463902 ~ 3475242 (-) |
| LOC120544885 | NA | coding | upstream | 316369 | 3483725 ~ 3505303 (-) |
| LOC120546063 | NA | coding | upstream | 385082 | 3552438 ~ 3582804 (-) |
| G172342 | NA | non-coding | downstream | 6515 | 3152061 ~ 3152756 (-) |
| G172313 | LOC104947167 | non-coding | downstream | 171055 | 2987937 ~ 2988216 (-) |
| G172312 | NA | non-coding | downstream | 171665 | 2987209 ~ 2987606 (-) |
| G172295 | NA | non-coding | downstream | 286159 | 2872856 ~ 2873112 (-) |
| LOC120545025 | NA | non-coding | downstream | 349741 | 2808974 ~ 2809530 (-) |
| G172432 | NA | non-coding | upstream | 158410 | 3325766 ~ 3327234 (-) |
| G172439 | NA | non-coding | upstream | 190769 | 3358125 ~ 3358520 (-) |
| G172443 | NA | non-coding | upstream | 195391 | 3362747 ~ 3363219 (-) |
| G172444 | NA | non-coding | upstream | 196161 | 3363517 ~ 3370798 (-) |
| G172468 | NA | non-coding | upstream | 292989 | 3460345 ~ 3463100 (-) |
| G172311 | NA | other | downstream | 174011 | 2984822 ~ 2985260 (-) |
| G172032 | NA | other | downstream | 1557115 | 1596516 ~ 1602156 (-) |
| G171868 | NA | other | downstream | 1988482 | 1170203 ~ 1170789 (-) |
| megf10 | megf10 | other | downstream | 2012684 | 1040798 ~ 1146587 (-) |
| prrc1 | prrc1 | other | downstream | 2151083 | 994437 ~ 1008188 (-) |
| G172620 | NA | other | upstream | 719232 | 3886588 ~ 3943831 (-) |
| cdk9 | cdk9 | other | upstream | 971810 | 4139166 ~ 4147813 (-) |
| dpm2 | dpm2 | other | upstream | 1385515 | 4552871 ~ 4559768 (-) |
| G172920 | NA | other | upstream | 1603461 | 4770817 ~ 4771303 (-) |
| odf2a | LOC103374699 | other | upstream | 1678923 | 4846279 ~ 4897357 (-) |
