LOC120546049


Basic Information

Item Value
gene id LOC120546049
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 13117480 ~ 13134012 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636779.1
cagccttTCCGGAAGCTGTGCAGATTAAATCCAAGATTAATTTCGGCCACACAGCTGGGAAAATGTGAACGGGAAGGTGGCGAAGTGCCAGATATGATAGACAAAGAAACCAGGAGGCCAAAAAAATTCAGGTTGGAGAATGACGACCTCTTCACGGGGGACGAGGCACACAGCCAAGAAGGCCTGGGAgattacagaaaaacaaCTGGCCCAATTTTCATGAAACCTGATGGAGGCGTGTAGGATGGGCCAAGGAAGCACCCTTTTACTTGGAGCAGATCTGAATCACAGatgcacaaattatttttccgCTTTCTTCTTTTCGATTTCTTCCAGATATTTCATGGCTCACCTGTTCACAGCTCATCTGTTTGTCTTTGCTCTTCGTTGTCACACATATAGTAGAAACTGCTATCGACGTGTTGTTTAAACACTCtgagcaatcaaacacaacatcttCTTTATAGCATCCATGTTGTTTCCACATTGAAGCTTAAAGCTCATGAACACAGAAGTCAGCACAACTTGCCAACTCGGGAAATGAGACCATCGAAGGAGCACATGAATGCACCATAGGCCTTGTTTTGTGCTCTCTGAGTGCaagtttaattacatttttgtcattcGATTATTGTTTTATCCTATTACTTTTTGTCTTGTGAATATTGTCCATAAGAGATAATCAAATCAGTAATAGTTATCATTTATTTTGAGTGCATAAACATGTCAGAACTTAGGAAAGAATCAGGTTCCAACATATTCAGATCACTTCATTTATCTgaacaacagtccaaaacccaatgACATTGGTTTTACCATCATAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636779.1 True 825 lncRNA 0.41 3 13117480 13134012

Neighbor

gene id symbol gene type direction distance location
si:busm1-57f23.1 NA coding downstream 619528 12490251 ~ 12497952 (-)
musk musk coding downstream 650315 12422834 ~ 12467165 (-)
stbd1 NA coding downstream 798685 12312236 ~ 12318795 (-)
LOC120546050 stoml2 coding downstream 932997 12175383 ~ 12184483 (-)
pigo pigo coding downstream 944096 12162293 ~ 12173384 (-)
galt galt,LOC102780609 coding upstream 221176 13355188 ~ 13386974 (-)
hdhd2 hdhd2 coding upstream 297597 13431609 ~ 13439708 (-)
skor2 skor2 coding upstream 310694 13444706 ~ 13457895 (-)
LOC120545744 hspb9 coding upstream 479268 13613280 ~ 13614293 (-)
LOC120545595 epha5,LOC102777475,LOC102204755,LOC102304993 coding upstream 498089 13632101 ~ 13706928 (-)
G174507 NA non-coding downstream 53537 13063744 ~ 13063943 (-)
G174501 NA non-coding downstream 104663 13012184 ~ 13012817 (-)
G174500 NA non-coding downstream 137195 12979826 ~ 12980285 (-)
G174482 NA non-coding downstream 490053 12627207 ~ 12627427 (-)
G174481 NA non-coding downstream 547909 12565702 ~ 12569571 (-)
G174512 NA non-coding upstream 137444 13271456 ~ 13277068 (-)
G174536 NA non-coding upstream 255573 13389585 ~ 13389970 (-)
G174537 NA non-coding upstream 256041 13390053 ~ 13391934 (-)
G174546 NA non-coding upstream 293843 13427855 ~ 13428083 (-)
G174563 NA non-coding upstream 447378 13581390 ~ 13582508 (-)
cntfr cntfr,LOC108232720,LOC103473535 other downstream 198920 12646286 ~ 12918560 (-)
tmem267 tmem267 other downstream 479986 12631225 ~ 12637494 (-)
G174442 lpar1 other downstream 725996 12390555 ~ 12391484 (-)
G174439 NA other downstream 759590 12356928 ~ 12357890 (-)
LOC120545042 NA other downstream 1952986 11153767 ~ 11164494 (-)
ier3ip1 ier3ip1,LOC106633120,LOC102779563,LOC104954869 other upstream 307268 13441280 ~ 13444079 (-)
smad2 smad2,LOC102778427 other upstream 449605 13583617 ~ 13606140 (-)
G174799 dusp4,LOC103390320,LOC107396907,LOC107092021,LOC103473566,LOC102218109 other upstream 1346450 14480462 ~ 14483417 (-)
G174827 NA other upstream 1450687 14584699 ~ 14589020 (-)
G175000 arpc3 other upstream 2516725 15650737 ~ 15654486 (-)

Expression


Co-expression Network