LOC120546303



Basic Information


Item Value
gene id LOC120546303
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 55936 ~ 57849 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU245651
atTGCTCCTACCACACAGGCTTAGGTGTTTATCCAATTAGGAGTGCTCTGAAAGAAAGAGTGAGGAAGGGCCAAACAGAATTGCTGATCGACTGGGAGCCTTGTGCAGCATGTGGGAAACAGTGGAATCCTACTTGGGAGCCCAAGGAGTCATTTGTGTGATTGATTAATTTtgtaatatatgttgttttattttttttattatacattaCATATGCAATAAAGTG
>XR_005636858.1
atTGCTCCTACCACACAGGCTTAGGTGTTTATCCAATTAGGAGTGCTCTGAAAGAAAGAGTGAGGAAGGGCCAAACAGAATTGCTGATCGACTGGGAGCCTTGTGCAGCATGTGGGAAACAGTGGAATCCTACTTGGGAGCCCAAGGAGTCATTTGTGTGATTGATTAATTTtgtaatatatgttgttttattttttttattatacattaCATATGCAATAAAGTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU245651 False 226 lncRNA 0.39 3 55936 57849
XR_005636858.1 True 226 lncRNA 0.39 3 55936 57849

Neighbor


gene id symbol gene type direction distance location
LOC120547155 NA coding downstream 16303 37505 ~ 39633 (-)
LOC120546293 NA coding upstream 220573 278422 ~ 286568 (-)
serinc1 serinc1,LOC104938560,LOC102778905 coding upstream 478140 535989 ~ 550593 (-)
slc35f1 slc35f1 coding upstream 495491 553340 ~ 572016 (-)
nus1 nus1 coding upstream 520495 578344 ~ 591833 (-)
LOC120547160 NA coding upstream 551809 609658 ~ 610988 (-)
trnad-guc_17 NA non-coding downstream 46387 9478 ~ 9549 (-)
LOC120546305 NA non-coding upstream 76974 134823 ~ 135586 (-)
G181223 NA non-coding upstream 82341 140190 ~ 140396 (-)
G181226 NA non-coding upstream 90374 148223 ~ 148500 (-)
G181233 NA non-coding upstream 161929 219778 ~ 220172 (-)
G181243 NA non-coding upstream 292648 350497 ~ 350709 (-)
G181196 NA other downstream 7183 47081 ~ 48753 (-)
G181206 NA other upstream 127 57976 ~ 79310 (-)
G181297 NA other upstream 580961 638810 ~ 639513 (-)
G181860 NA other upstream 3317916 3375765 ~ 3376108 (-)
G181919 bach2 other upstream 3550998 3608847 ~ 3610329 (-)
srp9 srp9 other upstream 3833788 3891637 ~ 3893175 (-)

Expression



Co-expression Network