G181298


Basic Information

Item Value
gene id G181298
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 652514 ~ 652800 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU245771
cttcgggtcccagtgacccgaaggaccacacaaggattatgtacttccctttactttgttgagaattgctctctaaaccctgtttcttgtaaagtaagtaagtaaagtttatttctagaacacatttaaacacagtttaagctgaccaaaatgctgtacaaacaagaactaaggtgctgtattaacccttgtttagagagcaattctcaacaaagtaaagggaagtacacaatccttgtgttgtccttcgggtcactgggacccgaaggacaacacaagggttaagg

Function

GO: NA

KEGG:

id description
ko00190 Oxidative phosphorylation
ko04714 Thermogenesis
ko05012 Parkinson disease
ko04932 Non-alcoholic fatty liver disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU245771 True 287 lncRNA 0.41 1 652514 652800

Neighbor

gene id symbol gene type direction distance location
LOC120546301 NA coding upstream 2141 649298 ~ 650373 (+)
hsf2 NA coding upstream 122867 510134 ~ 529647 (+)
gja1b gja1,LOC104939046,LOC107094788 coding upstream 386828 258222 ~ 265686 (+)
trnav-aac_11 NA coding upstream 644902 7540 ~ 7612 (+)
trnav-cac_9 NA coding downstream 170000 822800 ~ 822872 (+)
trnav-cac_10 NA coding downstream 171526 824326 ~ 824398 (+)
trnav-cac_11 NA coding downstream 173055 825855 ~ 825927 (+)
trnaf-aaa_1 NA coding downstream 175994 828794 ~ 828867 (+)
trnav-aac_13 NA coding downstream 178899 831699 ~ 831772 (+)
G181286 NA non-coding upstream 15136 636983 ~ 637378 (+)
G181284 NA non-coding upstream 24462 627291 ~ 628052 (+)
G181261 NA non-coding upstream 52577 599696 ~ 599937 (+)
G181247 NA non-coding upstream 73317 531103 ~ 579197 (+)
trnam-cau_53 NA non-coding upstream 434368 218075 ~ 218146 (+)
G181305 NA non-coding downstream 26616 679416 ~ 680263 (+)
LOC120546155 NA non-coding downstream 212882 865682 ~ 867699 (+)
G181347 NA non-coding downstream 227679 880479 ~ 880898 (+)
G181357 ginm1,LOC102789516 non-coding downstream 250962 903762 ~ 905192 (+)
G181360 NA non-coding downstream 262988 915788 ~ 959465 (+)
LOC120547162 katna1,LOC104968001 other downstream 218281 871081 ~ 896358 (+)
slc16a10 slc16a10,LOC106607741 other downstream 534302 1187102 ~ 1239126 (+)
marcksa marcks other downstream 1292758 1945558 ~ 2011423 (+)
nt5dc1 nt5dc1,LOC102795200 other downstream 1735206 2388006 ~ 2497160 (+)
dse dse,LOC102795484 other downstream 1849968 2502768 ~ 2533772 (+)

Expression


Co-expression Network