G181623


Basic Information

Item Value
gene id G181623
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 1893298 ~ 1893929 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU246185
ccgtcatcacatacgtgagctgcgtctccagatacttagaactgattggtttgttgacggcttccccgtcctctcgtatcctctctctgggtcagagtttaggctattcaactgaccgctgctctcccctactgccgcggctctttttgttttgttgtgatgtagagaagcaagacacgggactttctttctggagcatttattcagagacaaacggaaacatacactgtagcctacatttactaccacttaacaaataaactgctgatgtattatctgctctgatagctgacagctgtctgctctgagcgcatttacagtctctctctctcactaagcaccgagctattccttaaaggagcttccccggtcttgtaacacgaggagagcctgccagagattcctgtatttggtccgaaagtccgaaccatcccaaaaatgctttcacactataaacgaaccggatcatggttcagtttggtccggaccgagaccacctctttttgtcggaccaaaatttggtcttttgatccggaccatggtccgggggaggtttcacacctgtaattttggttcggatcaaactaaaaagtccgaaagtccggaccaaacgaggtatgtgtgaaaacgcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246185 True 632 lncRNA 0.47 1 1893298 1893929

Neighbor

gene id symbol gene type direction distance location
trnas-gcu_17 NA coding upstream 112891 1780326 ~ 1780407 (+)
trnas-gcu_16 NA coding upstream 119640 1773577 ~ 1773658 (+)
trnas-gcu_15 NA coding upstream 121991 1771229 ~ 1771307 (+)
trnas-gcu_14 NA coding upstream 124680 1768537 ~ 1768618 (+)
ccn6 wisp3,LOC102792986 coding upstream 334770 1552369 ~ 1558528 (+)
LOC120546973 LOC106532704,LOC105919233,LOC103397900,LOC107386316,LOC107372777 coding downstream 11023 1904952 ~ 1905697 (+)
LOC120546178 NA coding downstream 288417 2182346 ~ 2193877 (+)
ndufaf4 NA coding downstream 645358 2539287 ~ 2542904 (+)
gpr63 gpr63 coding downstream 655517 2549446 ~ 2557939 (+)
epha7 epha7 coding downstream 1010062 2903991 ~ 3003435 (+)
G181611 NA non-coding upstream 88787 1804244 ~ 1804511 (+)
G181606 NA non-coding upstream 128182 1764680 ~ 1765116 (+)
G181505 NA non-coding upstream 372639 1520006 ~ 1520659 (+)
G181488 NA non-coding upstream 494265 1398607 ~ 1399033 (+)
G181487 NA non-coding upstream 495706 1397003 ~ 1397592 (+)
G181626 NA non-coding downstream 31886 1925815 ~ 1926445 (+)
G181672 NA non-coding downstream 294991 2188920 ~ 2189383 (+)
G181708 NA non-coding downstream 594853 2488782 ~ 2489312 (+)
G181736 NA non-coding downstream 649972 2543901 ~ 2544905 (+)
G181742 NA non-coding downstream 656744 2550673 ~ 2550930 (+)
slc16a10 slc16a10,LOC106607741 other upstream 654172 1187102 ~ 1239126 (+)
LOC120547162 katna1,LOC104968001 other upstream 996940 871081 ~ 896358 (+)
marcksa marcks other downstream 51629 1945558 ~ 2011423 (+)
nt5dc1 nt5dc1,LOC102795200 other downstream 494077 2388006 ~ 2497160 (+)
dse dse,LOC102795484 other downstream 608839 2502768 ~ 2533772 (+)
G181758 NA other downstream 696540 2590469 ~ 2591346 (+)
map3k7 map3k7,LOC102796968 other downstream 1588678 3482607 ~ 3512661 (+)

Expression


Co-expression Network