G181740


Basic Information

Item Value
gene id G181740
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 2558960 ~ 2561009 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU246328
gaagattcTCAATCGGCCATGGGATGCCAGATTGGTCAAGGCAGCTGGACTCACTGTGTGGAAGacgttttttcttttgcatctaACCAAAGAGGCTTCATCACTGCTGAAACCTCCAGCTTTAATTTCTCTCATTGTGGCCAAGTTTAAAAGATATTTGCTTCCCATATTGAAAAGGGGAAAACATGGTGGCTGTACTGAAAGTAGTTGCAGTCCCGTGCTTAGTTTTCTATAAGATGGGAGTTGATGTGTTTGGGACTTGAATCCTGACGCAACATATTTGCTTGTCTTGTACACTGGAAGTCCAGTTGCCCTAAAGTCTGTGCAGATTCTTTCATTCAGTTTATTGTATTTCACGAAGTACCAACTGAGGCAGCTGGctgctttgtctctgtctcaaaTAGCAGACCAAACCACCGGTACGTTGGCCTTTTGATTAAGTAATTGTAGATAAACAACCATATATCTctttaaagcccagttcagaccaaagattcgcgacGAGAGGAAAGTttcagcggtctgaaccggcccgtctcagctcgactcagaCCAGCTGATGGCATCGTGCgactcagctggtggagtctgcagaggctggttttagaacgtaagagatgTCTtgtgtttcaacagccaatagagaagtctgCTTGTAATCTGCtacaataaaatgatccataatccattttatttctgttacaaactGTTAACGGAGCCTCCATGTGCGCCAACAAGCACGtacggtggagcgagctagagagagGGAGCTCCTAGGACAAATCAGGGAATCgcagaaataaaacatgttttcgccgattcaccACTAGAGATGTACagtaactgtagcaagcatctcactatccctgacgttatccacattcacaTTTAGaggcaacaaatgatatatttaGCTACAAAAAGTACAAAGATTGGTTGCTCTGGAGAGGATACACCATCTCATGTCGTcacattggtgtgaactggcagctttcacaACGCTGCAGACAGAGTTATAAGTTATAACTCGTctcgaatctttggtctgaactgggcttaataGACTTGGTACCTTTTAcagaatgctttttttttttctttctagttGCATGTTGTCTAAACCCAAGCAACCGCCTAAATACAGTGAAAAACTGTCCGAATTATTGTTCAAGTCAGGAGATATCAAGAATACAAAACTACCTGATGCCACCTTTCGATACTTGACAGTTTTTAGATTTTGGTTCTACCGACACATTGCTTTCGgtgttaaatgtatttaaagttgATACCCAGCTCTACTCGGTAGACCAGAATGCAGTGCAGCAACGAGACATTTCCAGCTCAGAATCCAACCGTGGATGAACTTGCTGTGTCGAACTCagactttaaaaagaaatgaattTGCGATGCGTCCAAAACAAACGCAATCCTGGACAAAATACATTTCCCTCGAAACGTACTTAAGAAAGCAGTTTGGTTGTATGGGAATATCATTTTTATTAGACAGGGCTGTAGCTATGGCTAAGGCTCTTTCTCCACCAGCTCAACCCAAAATATGACTTCTTCTCTGAGGGTGATGCATTCTCATTCTGGGTAATAAAGGAAACATTTGAAGTGAAGTAGTCGACTGAAGGAAACCATAAAGGCAAACCAAGGCTTTTAGAACTCGTGGAATGCACTGAATGGCACGTACTGTCTGAGGGTATAAACGggtgagttttttttcctttcatagTGTTCTGTTTGTTGAAGACAGACGCTGCTGGGTTTGACTTGACCATACGTCTGTCCTTGGGGAAAGGACCGTGTGTTTTAGCTGTGTAGGATGTGTTTTAATGAGGCATGTAAATTAATAGCTTAAATTGAATTTGAATATGGTCAGAAAGTGGCCCCGACTCATCTGTACGCGTGTATTtctatttaaatgttttggatGTGCCTATTGATTAGTCCATTTGCCAGTCAGAATGCTGCTATATCTGGTGAAAATGTGCAATTTCAGTGTACTGTACTGTTGAATGTAATAAAGAAATAGGAATTTCTTACCTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246328 True 2050 lncRNA 0.42 1 2558960 2561009

Neighbor

gene id symbol gene type direction distance location
gpr63 gpr63 coding upstream 1021 2549446 ~ 2557939 (+)
ndufaf4 NA coding upstream 16056 2539287 ~ 2542904 (+)
LOC120546178 NA coding upstream 365083 2182346 ~ 2193877 (+)
LOC120546973 LOC106532704,LOC105919233,LOC103397900,LOC107386316,LOC107372777 coding upstream 653263 1904952 ~ 1905697 (+)
trnas-gcu_17 NA coding upstream 778553 1780326 ~ 1780407 (+)
epha7 epha7 coding downstream 342982 2903991 ~ 3003435 (+)
bach2b bach2 coding downstream 965683 3526692 ~ 3628801 (+)
mdn1 mdn1 coding downstream 1117748 3678757 ~ 3763387 (+)
rpl7l1 rpl7l1 coding downstream 1272637 3833646 ~ 3839871 (+)
slc5a6a LOC103362495,LOC105937095,LOC100707849,LOC102229267 coding downstream 1279002 3840011 ~ 3865940 (+)
G181741 NA non-coding upstream 121 2558021 ~ 2558839 (+)
G181742 NA non-coding upstream 8030 2550673 ~ 2550930 (+)
G181736 NA non-coding upstream 14055 2543901 ~ 2544905 (+)
G181708 NA non-coding upstream 69648 2488782 ~ 2489312 (+)
G181672 NA non-coding upstream 369577 2188920 ~ 2189383 (+)
G181755 NA non-coding downstream 6313 2567322 ~ 2567751 (+)
G181757 NA non-coding downstream 9787 2570796 ~ 2571121 (+)
G181768 NA non-coding downstream 76370 2637379 ~ 2638523 (+)
G181773 NA non-coding downstream 126816 2687825 ~ 2688975 (+)
G181787 NA non-coding downstream 256490 2817499 ~ 2817771 (+)
dse dse,LOC102795484 other upstream 25188 2502768 ~ 2533772 (+)
nt5dc1 nt5dc1,LOC102795200 other upstream 61800 2388006 ~ 2497160 (+)
marcksa marcks other upstream 547537 1945558 ~ 2011423 (+)
slc16a10 slc16a10,LOC106607741 other upstream 1319834 1187102 ~ 1239126 (+)
LOC120547162 katna1,LOC104968001 other upstream 1662602 871081 ~ 896358 (+)
G181758 NA other downstream 29460 2590469 ~ 2591346 (+)
map3k7 map3k7,LOC102796968 other downstream 921598 3482607 ~ 3512661 (+)
lyrm2 NA other downstream 1203322 3764331 ~ 3771330 (+)
G181944 ankrd6 other downstream 1223786 3784795 ~ 3792897 (+)
LOC120547057 NA other downstream 1261805 3822814 ~ 3829423 (+)

Expression


Co-expression Network