lyrm2


Basic Information

Item Value
gene id lyrm2
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 3764331 ~ 3771330 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU246572
GTTTGTCCGAGATGGCCGCTTCAAGGTTACCGTCTGCAGCGCTTTCTCTGAAACAGttcttacagagacagagagtttTGGGGATCTACAGGAACATGCTGAGGGCCATACGGAAGGTACCTGACCAGGCAGACAGGAAGTACCTCAGTGACTGGGCCAGAGACGAGTTCAAGAGGAACAAGAACGCCACAGACCAGGATGCCATCCGTATGATGATCACACAAGCAAGCAACCATCTGGAGGAGCTGCACAAGTCTCTGGCGTTGGCCGGCCGGTGACTGGGAGCTGCTGGGGGTCTGGACTGCTTTCTGTGGAGACTGTATGCAGGGGAGTGTTGCTGTCAGTGAGCGCTGCAGGCTTTGGCTGGACACCTTTTCCAGGATGTGTTGATGGAACTGACCCAAAGGCTCCACCCGTTAACCCCTGAGGCTGACTGGCCTTTGGCCACACTTCTGTTGGCGCTGTTAATAATATGTAAGGATATtgtatattaaaggggtgatagaatgcaaaacctattttaccctgtcatagttgaatgaggacagttcggtgggtaaataggacatacatagaagctcaaagtcccactgacacctctttactatgaaaatctcatattttgaaactgccgctgaaaacgggcgaatcccaacaaagctggaagttgacgtcaacctcccaaaaaccggaacctttgtcagcccatgggtgtattaagagaacggtcacgccccaacatttacacaggctacacaactgacctgagatcaggtagttttctgaatctagctaggtcacgcagatctctgctattccattacaaaattaaattctgaaacttttttatgtgag
>XM_039782304.1
ACATACGGAAGAAGGCGGTAGTCACGTGATCACAACATCCGGTTTGTCCGAGATGGCCGCTTCAAGGTTACCGTCTGCAGCGCTTTCTCTGAAACAGttcttacagagacagagagtttTGGGGATCTACAGGAACATGCTGAGGGCCATACGGAAGGTACCTGACCAGGCAGACAGGAAGTACCTCAGTGACTGGGCCAGAGACGAGTTCAAGAGGAACAAGAACGCCACAGACCAGGATGCCATCCGTATGATGATCACACAAGCAAGCAACCATCTGGAGGAGCTGCACAAGTCTCTGGCGTTGGCCGGCCGGTGACTGGGAGCTGCTGGGGGTCTGGACTGCTTTCTGTGGAGACTGTATGCAGGGGAGTGTTGCTGTCAGTGAGCGCTGCAGGCTTTGGCTGGACACCTTTTCCAGGATGTGTTGATGGAACTGACCCAAAGGCTCCACCCGTTAACCCCTGAGGCTGACTGGCCTTTGGCCACACTTCTGTTGGCGCTGTTAATAATATGTAAGGATATtgtatattaaaggggtgatagaatgcaaaaccta

Function

NR:

description
LYR motif-containing protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246572 True 855 TUCP 0.49 3 3764372 3771330
XM_039782304.1 False 559 mRNA 0.52 3 3764331 3770993

Neighbor

gene id symbol gene type direction distance location
mdn1 mdn1 coding upstream 944 3678757 ~ 3763387 (+)
bach2b bach2 coding upstream 135530 3526692 ~ 3628801 (+)
epha7 epha7 coding upstream 760896 2903991 ~ 3003435 (+)
gpr63 gpr63 coding upstream 1206392 2549446 ~ 2557939 (+)
ndufaf4 NA coding upstream 1221427 2539287 ~ 2542904 (+)
rpl7l1 rpl7l1 coding downstream 62316 3833646 ~ 3839871 (+)
slc5a6a LOC103362495,LOC105937095,LOC100707849,LOC102229267 coding downstream 68681 3840011 ~ 3865940 (+)
enah enah coding downstream 180796 3952126 ~ 4038470 (+)
lbr lbr,LOC102787771 coding downstream 269599 4040929 ~ 4079924 (+)
trnav-aac_27 NA coding downstream 407868 4179198 ~ 4179270 (+)
G181898 NA non-coding upstream 230149 3533778 ~ 3534182 (+)
G181896 NA non-coding upstream 235115 3528966 ~ 3529216 (+)
G181875 NA non-coding upstream 300496 3463596 ~ 3463835 (+)
G181874 NA non-coding upstream 307492 3456625 ~ 3456839 (+)
LOC120547019 NA non-coding upstream 350832 3410184 ~ 3413499 (+)
G181940 NA non-coding downstream 145 3771475 ~ 3771820 (+)
G181938 NA non-coding downstream 856 3772186 ~ 3772493 (+)
G181955 NA non-coding downstream 43088 3814418 ~ 3819243 (+)
G181958 NA non-coding downstream 59227 3830557 ~ 3831337 (+)
G181959 NA non-coding downstream 60413 3831743 ~ 3831971 (+)
map3k7 map3k7,LOC102796968 other upstream 251670 3482607 ~ 3512661 (+)
G181758 NA other upstream 1172985 2590469 ~ 2591346 (+)
dse dse,LOC102795484 other upstream 1230559 2502768 ~ 2533772 (+)
nt5dc1 nt5dc1,LOC102795200 other upstream 1267171 2388006 ~ 2497160 (+)
marcksa marcks other upstream 1752908 1945558 ~ 2011423 (+)
G181944 ankrd6 other downstream 13465 3784795 ~ 3792897 (+)
LOC120547057 NA other downstream 51484 3822814 ~ 3829423 (+)
LOC120547324 LOC107698917,LOC107663605 other downstream 276764 4048094 ~ 4051091 (+)
trnad-guc_22 NA other downstream 376252 4147582 ~ 4147653 (+)
trnad-guc_23 NA other downstream 384761 4156091 ~ 4156162 (+)

Expression


Co-expression Network