G181944 (ankrd6)


Basic Information

Item Value
gene id G181944
gene name ankrd6
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 3784795 ~ 3792897 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU246582
TCTTTCCGTCTTTGCCGCGGTACAGTGTGTACAGCTGATAGGCTTTATAGTTATGTGGGGGGATGGATGCTCCTGGCAGTTTGCATTTCCTCTCGCTGTGCCTGGTCTCTCTGCGGCGCGGGGGGTCGGACAAAGGTGGTTTCTCTTTGTGCTTCCTGTTCCGTCCCCTCCTGGCGTTGATCGGGGACACCTCGGCGTGTTTGCAGCCAGCTCGGTCACTGCTCTGGGTGTCCTCTGCAGCAGAGGCGCTGTCCTTACAGGGCAGCATCTCATCTCTGGGCACAGACTGAGCTCGGCCCTCGGCCTTCAGCttgtctctcctcttcctcacacTCCGGCCACGCACAAAGCTCTGCACCTGGGGGGCTTTGGTCAGCAGGAGAG

Function

symbol description
ankrd6 Predicted to be involved in negative regulation of canonical Wnt signaling pathway and positive regulation of JNK cascade. Predicted to act upstream of or within positive regulation of Wnt signaling pathway, planar cell polarity pathway. Located in intracellular membrane-bounded organelle.

NR:

description
PREDICTED: ankyrin repeat domain-containing protein 6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246582 True 384 TUCP 0.60 4 3784795 3792897

Neighbor

gene id symbol gene type direction distance location
mdn1 mdn1 coding upstream 21408 3678757 ~ 3763387 (+)
bach2b bach2 coding upstream 155994 3526692 ~ 3628801 (+)
epha7 epha7 coding upstream 781360 2903991 ~ 3003435 (+)
gpr63 gpr63 coding upstream 1226856 2549446 ~ 2557939 (+)
ndufaf4 NA coding upstream 1241891 2539287 ~ 2542904 (+)
rpl7l1 rpl7l1 coding downstream 40749 3833646 ~ 3839871 (+)
slc5a6a LOC103362495,LOC105937095,LOC100707849,LOC102229267 coding downstream 47114 3840011 ~ 3865940 (+)
enah enah coding downstream 159229 3952126 ~ 4038470 (+)
lbr lbr,LOC102787771 coding downstream 248032 4040929 ~ 4079924 (+)
trnav-aac_27 NA coding downstream 386301 4179198 ~ 4179270 (+)
G181938 NA non-coding upstream 12302 3772186 ~ 3772493 (+)
G181940 NA non-coding upstream 12975 3771475 ~ 3771820 (+)
G181898 NA non-coding upstream 250613 3533778 ~ 3534182 (+)
G181896 NA non-coding upstream 255579 3528966 ~ 3529216 (+)
G181875 NA non-coding upstream 320960 3463596 ~ 3463835 (+)
G181955 NA non-coding downstream 21521 3814418 ~ 3819243 (+)
G181958 NA non-coding downstream 37660 3830557 ~ 3831337 (+)
G181959 NA non-coding downstream 38846 3831743 ~ 3831971 (+)
G181960 NA non-coding downstream 39467 3832364 ~ 3832605 (+)
G181967 NA non-coding downstream 73158 3866055 ~ 3866368 (+)
lyrm2 NA other upstream 13465 3764331 ~ 3771330 (+)
map3k7 map3k7,LOC102796968 other upstream 272134 3482607 ~ 3512661 (+)
G181758 NA other upstream 1193449 2590469 ~ 2591346 (+)
dse dse,LOC102795484 other upstream 1251023 2502768 ~ 2533772 (+)
nt5dc1 nt5dc1,LOC102795200 other upstream 1287635 2388006 ~ 2497160 (+)
LOC120547057 NA other downstream 29917 3822814 ~ 3829423 (+)
LOC120547324 LOC107698917,LOC107663605 other downstream 255197 4048094 ~ 4051091 (+)
trnad-guc_22 NA other downstream 354685 4147582 ~ 4147653 (+)
trnad-guc_23 NA other downstream 363194 4156091 ~ 4156162 (+)
LOC120547181 NA other downstream 712036 4504933 ~ 4522912 (+)

Expression


Co-expression Network