LOC120547057


Basic Information

Item Value
gene id LOC120547057
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 3822814 ~ 3829423 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU246595
CGTAATTGCAGTGAGCGGAGTCCCAGCGCAGAGCTCGTCGCGTCAGTACGCAGTACAGAAAGCAGCCATGTAAACCGAATAAGCCATCCAGTGGATTCACAGAAGGGACTAACGTGGAAGAGAAACGTACTGGCTGGCCCCCAAGCCCCGGAGAGCAGAATGGGGCCCCGTCCTGGAGAAGAAGGGTGTGACTGCAGCAGGCTGGATGTTTCACTCTCTTCTCTTTGTGCTCTTCTTCATCTGCTGTCAACCTAAGACAAGATCGCCAAAGAATGGAACCAGATATTGGAGAAGCAGGGATTGTCTGCAGTAATACTGTCAGTTGATGATTCTTCTGCTGACACCTAAACATCACTGAGTCAGAGGAATGTGCTGCAGTAACCTAAGGGCTGCTCTGATCTATCCACAATGCAAAGAGCTCCGGCCTCCCACAGATAAGGTGTTCCCAGTGTTGGTTTCATAGCGAGAGGATAAAGCACAGACTGCAGGAGAGGTACATGTGAAGGGCGTGGATGAAGGCTGCTGTGACCTACTGTACAATCCAATGCCTGGCAGACTCACAGTTTCCAAAATCTATGGAGCCTGGGATGTATCATAGACttttcactgtaattgtaatCAATGAGTTATTTGATCAATTTAAAAGCATTATGAATGTGCATCTCAGTGATGCAGTGATAAACTCAAAGTAAAGAATATATAGCCACAGCAATTCTGGGTTCAAGACTTTTATGATGAAAGTCAAGTCACTCTAGCCAGTTCATTTCTGTTTAAGAGGTTAAAGGAGTGAAAACAATCACATAGCATTACTCTTGCATGTattctaaatacatttacaattACTTTGGAGCTTTCTGAAATGTATTTATCAAATCTTAATGTCATTTGGAAAAAAGATAGCCTGCAGCTCTGTGTGCTTGTCCATTTCATCTAAAAACCCAACAACAGATTTTATCTCACCATGCTTTAGAACGTAACCACTGTGAAACTTTCAGAAATGATTTCTTTCATACACAGCaccactgctctctctctctctctctctctctctctctctctctctctctctccctctctctcaattTCAAACAggttgctttattggcatgacaaaaaatacatctgtgttgccaaagtatatatacatacaaacatacatataaacaacaacaaggagTAAATACATCTGATATTAATACAAGTAAACAGGATAATTATGATATAAATGAAGATACTAAAAAAATTATGTGCATGTCCCTCAAAGGGTACGTTGaaacaataatatatatttaaaaaaagaatacaaataaacaaaagaatagaaaaataaaaatgattatatATACAATTCTCTATTTATTGGTCCTTGTATTGTGGCAGgagaagacatatttagctgctAGCCATGCCGTGTTTTTATCTTCccctaataaaaaaggaagcttTTTGTCCTCAGTGTAGGTAGTGAAGCCTGGTAtatgtttttcaaatttttggaaatatttggTTCTTAAGTCTTCATATTTGGGACATGTACATAGGAAATGTAATTCTGTTTGGATATCCTGGTGGCAGTGTGTACAGACtcgttatattttatttattcatcaggCACAGCAGTAGAGTCAGTCCAGCAGTAGAGTCCAGAAATAGAGTCAGTCCAGCAGTAGAGTCCAGCAGTAGAGTCAGTCCAGCAGTAGAATCAGTCCAGTAGTATAGTCCAGCAGTAGAATATGTCCAGCAGTAGAATCAGTCCAGTAGTACAGTCCAGCAGTAGAATCAGTCCAGCAGTAGAATCAGTCCAGTAGTACAGTCCAGCAGTAGAATCAGTCCAGTAGTAGAGTCCAGCAGTAGAGTCAGTCCAGCAGTAGAATCAGTCCAGTAGTAGAGTCCAACAGTAGAGTCAGTCCAGCAGTAGAATCAGTCCAGTAGTAGATTCCAGCAGTAGAGTCAGTCCAGCAGTAGAGTCCAGCAGTAGAGTCAGTCCAGCAGTAGAATCAGTCCAGTAGTAGAGTCCAGCAGTAGAATCAGTCCAGTAGTAGAGTCCAGCAGTAGAGTCAGTCCAGCAGTAGAATCAGTCCAGTAGTAGAGTCCAGCAGTAGAATCAGTCCAGCAGTAGAGTCCAACAGTAGAGTCAGTCCAGCAGTAGAATCAGTCCAGTAGTAGAGTCCAGCAGTAGAGTCAGTCCAGCAGTAGAGTCCAGCAGTAGAGTCAGTCCAGCAGTAGAATCAGTCCAGTAGTACAGTCCAGCAGTAGAGTCAGTCCAGCAGTAGAGTCCGGCAGTAGAGTCAGTCCAGCAGTAGAATCAGTCCAGTAGTAGAGTCCAGCAGTAGAGTCAGTCAAGCAGTAGAGTCCAGCAGTAGAGTCAGTCCAGCACTAGAGTCAGTCCAGCAGTAGAATCAGTCCAGCAGTAGAGTCCAGAAGTAGAGTCAGTCCAGCAGTAGAGTCCAGAAGTAGAGTCAGTCCAGCAGTAGAGTCCAGCAGTAGAGTCAGTCCAGCAGTAGAGTCAGTCCAGCAGTAGAGTCTAGAAGTAGAGTCAGTCTAGCAGTAGAGTCAGTCCAGCAGTAGATAGTCCAGCAGTAGAGTCCAGAAGTATAGTCAGTCCAGCAGTAGAGTCCAGAAGTAGAGTCAGTCCAGCAGTAGAGTCCAGCAGTAGAGTCAGTCCAGCAGTAGAGTCAGTCCAGCAGTAGATAGTCCAGCAGTAGAGTCCAGAAGTATAGTCAGTCCAGTAGTAGAGTCCAGCAGTAGAGTCAGTCCAGCAGTAGAGTCTAGAAGTAGAGTCAGTCCAGCACTAGAGTCAGTCCAGCAGTAGAATCAGTCCAGCAGTAGAGTCCAGAAGTATAGTCAGTCCAGCAGTAGAGTCCAGAAGTAGAGTCAGTCCAGCAGTAGAGTCCAGCAGTAGAGTCAGTCCAGCAGTAGAGTCAGTCCAGCAGTAGAGTCTAGAAGTAGAGTCAGTCTAGCAGTAGAGTCAGTCCAGCAGTAGATAGTCCAGCAGTAGAGTCCAGAAATAGAGTCAGTCCAGCAGTAGAGTCCAGCAGTCCCAGAAGTTCAAACATTCATCAGGACATATTCACAAACAACTTGGTAGGAGTACTGGAACTTTAGTGAAACAGGAAGGCATCTTTACAATACAGACGTGTTGGTGATGGGAGGAAGGTGGGTTTTAAACGTAGGCAAGAAAATATCATTACTCATCTCAGAATTGGCCATACAGGTCTTAATTATTCATTATATAAGCTAGGCAAACATTCTACTGGAAAATGTGCATACTGTCACCAGCCTGACACTGTTGAACACATTCTAATTCATTGCAAGGAATACAGCACCCAGAGAGACCTTTTTCAGACACTCAGTAAGTCAGACCACCATACCTTTTCGGTCAGTGTATATTTtggtcattcgattttcatttcataaacaggtattaaaaaacaaaaaacgaatggttatttgattatcgttttaaaatacaaaaattgaaattgaagtaAAAGGCGTTTTTTGGTCAATGTGGGGGATTGGGGATgtgagaaatttaaaatatttttagattttcattttctatttcatataacgagactattactcatcactaatagaagaaaacaagaacaacccaaggtttcttttcagcactgtcgccaggctgacagatagccacagctctactgagccatctattcctctagctctgagtagtgatgacttcatgagcttcttcaatgataaaattacaacaattagagataaaattcatcaccttttacactcaacttctaacggttcacctttaaacgcagagtcgttagaaataaagactagtctcgacatatacttagactgcttttatcctatagaccttcaacaattaatgttaaagatatcctcagctaagccatctacctgtctcttggaccccatcccaacgagactactcaaagaagcattacctgtggttaacacttcattactagatatgatcaatatgtctctattaacaggttatgtaccacagtcatttaaagtagctgtgataaaacctcttctgaaaaaacccaccctggatcctgaggtcttagcaaactatagacctatatctaaccttccctttctatccaagatccttgagaaggtggttgctaatcagttatgtggttttctacatagcaatagtttatttgatgactttcaatcaggatttagaaagaatcatagcacagagacggcactggtgaaaattactaacgaccttttaac
>XR_005637024.1
TAATTGCAGTGAGCGGAGTCCCAGCGCAGAGCTCGTCGCGTCAGTACGCAGTACAGAAAGCAGCCATGTAAACCGAATAAGCCATCCAGTGGATTCACAGAAGGGACTAACGTGGAAGAGAAACGTACTGGCTGGCCCCCAAGCCCCGGAGAGCAGAATGGGGCCCCGTCCTGGAGAAGAAGGGTGTGACTGCAGCAGGCTGGATGTTTCACTCTCTTCTCTTTGTGCTCTTCTTCATCTGCTGTCAACCTAAGACAAGATCGCCAAAGAATGGAACCAGATATTGGAGAAGCAGGGATTGTCTGCAGTAATACTGTCAGTTGATGATTCTTCTGCTGACACCTAAACATCACTGAGTCAGAGGAATGTGCTGCAGTAACCTAAGGGCTGCTCTGATCTATCCACAATGCAAAGAGCTCCGGCCTCCCACAGATAAGGTGTTCCCAGTGTTGGTTTCATAGCGAGAGGATAAAGCACAGACTGCAGGAGAGGTACATGTGAAGGGCGTGGATGAAGGCTGCTGTGACCTACTGTACAATCCAATGCCTGGCAGACTCACAGTTTCCAAAATCTATGGAGCCTGGGATGTATCATAGACttttcactgtaattgtaatCAATGAGTTATTTGATCAATTTAAAAGCATTATGAATGTGCATCTCAGTGATGCAGTGATAAACTCAAAGTAAAGAATATATAGCCACAGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246595 True 4257 TUCP 0.42 2 3822814 3829423
XR_005637024.1 False 710 lncRNA 0.47 2 3822816 3825878

Neighbor

gene id symbol gene type direction distance location
mdn1 mdn1 coding upstream 59427 3678757 ~ 3763387 (+)
bach2b bach2 coding upstream 194013 3526692 ~ 3628801 (+)
epha7 epha7 coding upstream 819379 2903991 ~ 3003435 (+)
gpr63 gpr63 coding upstream 1264875 2549446 ~ 2557939 (+)
ndufaf4 NA coding upstream 1279910 2539287 ~ 2542904 (+)
rpl7l1 rpl7l1 coding downstream 4223 3833646 ~ 3839871 (+)
slc5a6a LOC103362495,LOC105937095,LOC100707849,LOC102229267 coding downstream 10588 3840011 ~ 3865940 (+)
enah enah coding downstream 122703 3952126 ~ 4038470 (+)
lbr lbr,LOC102787771 coding downstream 211506 4040929 ~ 4079924 (+)
trnav-aac_27 NA coding downstream 349775 4179198 ~ 4179270 (+)
G181955 NA non-coding upstream 3571 3814418 ~ 3819243 (+)
G181938 NA non-coding upstream 50321 3772186 ~ 3772493 (+)
G181940 NA non-coding upstream 50994 3771475 ~ 3771820 (+)
G181898 NA non-coding upstream 288632 3533778 ~ 3534182 (+)
G181896 NA non-coding upstream 293598 3528966 ~ 3529216 (+)
G181958 NA non-coding downstream 1134 3830557 ~ 3831337 (+)
G181959 NA non-coding downstream 2320 3831743 ~ 3831971 (+)
G181960 NA non-coding downstream 2941 3832364 ~ 3832605 (+)
G181967 NA non-coding downstream 36632 3866055 ~ 3866368 (+)
G181964 NA non-coding downstream 37099 3866522 ~ 3867402 (+)
G181944 ankrd6 other upstream 29917 3784795 ~ 3792897 (+)
lyrm2 NA other upstream 51484 3764331 ~ 3771330 (+)
map3k7 map3k7,LOC102796968 other upstream 310153 3482607 ~ 3512661 (+)
G181758 NA other upstream 1231468 2590469 ~ 2591346 (+)
dse dse,LOC102795484 other upstream 1289042 2502768 ~ 2533772 (+)
LOC120547324 LOC107698917,LOC107663605 other downstream 218671 4048094 ~ 4051091 (+)
trnad-guc_22 NA other downstream 318159 4147582 ~ 4147653 (+)
trnad-guc_23 NA other downstream 326668 4156091 ~ 4156162 (+)
LOC120547181 NA other downstream 675510 4504933 ~ 4522912 (+)
G182303 NA other downstream 982617 4812040 ~ 4812569 (+)

Expression


Co-expression Network