G182099



Basic Information


Item Value
gene id G182099
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 4092423 ~ 4092630 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU246768
cctgcatgtgctgtaaactggcgcttatcatttcaaatggtttgtgggacatggtggccctgaagactggtctcccactatggacatcccacaggctccgggtggattcccctttggaccggtacacaccagccaagtgtgaagtcccatgtatgttaaaatctcttgagcatccacatcactccatcctgagattgaacacctcccg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU246768 True 208 lncRNA 0.51 1 4092423 4092630

Neighbor


gene id symbol gene type direction distance location
ephx1 ephx1,LOC102787086 coding downstream 201773 3884965 ~ 3890650 (-)
LOC120547034 LOC104954367 coding downstream 207810 3875160 ~ 3884613 (-)
ankrd6b ankrd6 coding downstream 269510 3773170 ~ 3822913 (-)
casp8ap2 NA coding downstream 413826 3661553 ~ 3678597 (-)
gja10b gja10 coding downstream 447853 3640175 ~ 3644570 (-)
LOC120547172 NA coding upstream 84943 4177573 ~ 4184958 (-)
trnad-guc_28 NA coding upstream 86239 4178869 ~ 4178940 (-)
LOC120547177 NA coding upstream 102513 4195143 ~ 4196360 (-)
LOC120547149 LOC103361227,LOC102782649 coding upstream 267572 4360202 ~ 4400599 (-)
ube2j1 ube2j1 coding upstream 315358 4407988 ~ 4475102 (-)
G182028 NA non-coding downstream 222724 3867864 ~ 3869699 (-)
G182027 NA non-coding downstream 226063 3866017 ~ 3866360 (-)
G182018 NA non-coding downstream 261026 3830750 ~ 3831397 (-)
G182004 mdn1 non-coding downstream 337155 3752653 ~ 3755268 (-)
G181932 NA non-coding downstream 432873 3658371 ~ 3659550 (-)
G182105 NA non-coding upstream 10145 4102775 ~ 4103572 (-)
LOC120547275 NA non-coding upstream 65061 4157691 ~ 4162110 (-)
trnav-aac_22 NA non-coding upstream 65406 4158036 ~ 4158108 (-)
trnav-aac_23 NA non-coding upstream 67692 4160322 ~ 4160394 (-)
trnav-aac_24 NA non-coding upstream 69981 4162611 ~ 4162683 (-)
G182059 NA other downstream 178408 3908547 ~ 3914015 (-)
G182061 NA other downstream 180144 3906617 ~ 3912279 (-)
srp9 srp9 other downstream 199248 3891637 ~ 3893175 (-)
G181919 bach2 other downstream 482094 3608847 ~ 3610329 (-)
G181860 NA other downstream 716315 3375765 ~ 3376108 (-)
G182102 NA other upstream 7380 4100010 ~ 4100480 (-)
trnav-aac_20 NA other upstream 56277 4148907 ~ 4148978 (-)
trnav-aac_21 NA other upstream 63130 4155760 ~ 4155832 (-)
G182121 NA other upstream 70728 4163358 ~ 4165996 (-)
smim8 smim8 other upstream 653143 4745773 ~ 4803492 (-)

Expression



Co-expression Network