G182472


Basic Information

Item Value
gene id G182472
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 5777252 ~ 5777743 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU247227
attaaatacataGTGACAACTTCCATTTCTATAAAGGTACAGGAAATATGGTATGGTTTATGGAACAAATATGAGGAAATATTTGTGAAAGTCTGAGTTTGGCAACTCCACCCGTGTCCTGACGAGGAGCGGTTTTGGCTGGGTTGAAACACCCGAGAATTGAGacatcttaaaaacaaaaaggttaagTTAAGGTTAATAAGGGTAAGTCCTCCATAGTAGAGGTAAGTCCCAGGTAATTGTAGGGGTAAGTCCTCCATAGTAGAGGTAAGTCCCCTGGGGTAAGTCCTCCACAGTAGAGGTAAGTCCCCTGGGGTAAGTCCTCCACAGTAGAGGTAAGTCCCCAAAGGAGTTGAAGTCTCCTGAGGTTGACTGGTGAACGATTGTATTATTGAACCATTTCACACTATTTAGG

Function

GO: NA

KEGG:

id description
ko00140 Steroid hormone biosynthesis
ko04913 Ovarian steroidogenesis
ko04927 Cortisol synthesis and secretion

RNA

RNA id representative length rna type GC content exon number start site end site
TU247227 True 415 lncRNA 0.42 2 5777252 5777743

Neighbor

gene id symbol gene type direction distance location
lrfn2b LOC103354004,LOC104943823 coding downstream 189015 5389153 ~ 5588237 (-)
LOC120547345 NA coding downstream 497532 5259465 ~ 5279720 (-)
LOC120547277 NA coding downstream 523552 5247945 ~ 5253700 (-)
LOC120546193 NA coding downstream 653471 5115179 ~ 5123781 (-)
LOC120546227 htr1e coding downstream 863061 4871142 ~ 4914191 (-)
gopc gopc coding upstream 208694 5986437 ~ 6009440 (-)
LOC120546792 LOC104959018 coding upstream 292803 6070546 ~ 6073220 (-)
LOC120546794 NA coding upstream 685197 6462940 ~ 6464802 (-)
meis2b LOC104938729,LOC103355645,LOC105017579 coding upstream 984968 6762711 ~ 6800793 (-)
cnih3 cnih3,LOC108248696,LOC101155158,LOC107095392,LOC106527994,LOC107384796,LOC100708389,LOC103358879,LOC101472542 coding upstream 1667118 7444861 ~ 7588065 (-)
G182443 NA non-coding downstream 80449 5696456 ~ 5696803 (-)
G182441 NA non-coding downstream 109336 5667717 ~ 5667916 (-)
G182413 NA non-coding downstream 389069 5386807 ~ 5388183 (-)
G182368 NA non-coding downstream 541044 5235833 ~ 5236208 (-)
G182367 NA non-coding downstream 550582 5226393 ~ 5226670 (-)
G182501 NA non-coding upstream 132952 5910695 ~ 5911116 (-)
G182507 NA non-coding upstream 152920 5930663 ~ 5955950 (-)
LOC120546803 NA non-coding upstream 193090 5970833 ~ 5974899 (-)
G182513 NA non-coding upstream 198378 5976121 ~ 5976390 (-)
G182518 NA non-coding upstream 203661 5981404 ~ 5982754 (-)
zgc:112001 LOC103354005,LOC100690140,LOC102211542,LOC102799045,LOC102300982 other downstream 463537 5311506 ~ 5313715 (-)
smim8 smim8 other downstream 973760 4745773 ~ 4803492 (-)
G182121 NA other downstream 1611256 4163358 ~ 4165996 (-)
trnav-aac_21 NA other downstream 1621420 4155760 ~ 4155832 (-)
trnav-aac_20 NA other downstream 1628274 4148907 ~ 4148978 (-)
G182474 NA other upstream 12546 5790289 ~ 5792938 (-)
G182502 NA other upstream 133569 5911312 ~ 5911909 (-)
cgrrf1 NA other upstream 454999 6232742 ~ 6269143 (-)
G182764 NA other upstream 922748 6700491 ~ 6701117 (-)
G182952 NA other upstream 1983822 7761565 ~ 7766386 (-)

Expression


Co-expression Network