G182518


Basic Information

Item Value
gene id G182518
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 5981404 ~ 5982754 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU247278
ctacCACTTTCTCCCTTAATTCCTGTCCTCTCTCCACTTGTATTGCAATGGAATTCTTGGATATCAGGTTTCATCCAACTGTGCTCTATGGAGTTCAGGAACCTTGGGCTAGATGCCCAAGGTTCCCGATGGAGGGGAataatggagcgggagattggctGGAGAATCTGAGCAGCGGTGCAATATTGCATTCACTTTAAAGCGCGTCGTgacaaaaagagagctgagtcgaaaggcaaagctctcaatctaTTGGTCAATTTCCGTCACtcccctcacctatggtcatgaaggctgggtcatgagtcatgaccgaaagaactaGATTGCGGGTACAAGCAGCCAAAATGGGTtttctcaggagggtggctggctctcccttagagatagggtgagaagctcagtcatccgtgaggaactcggaatagagccactgctcctttgtgtcggaggagccagttgaggtggttcgagcatctggtaaggatgcccccttgGTACCTCCCTTGGGAGTTGTTTAtagcacgtccagctgggaggccTCCTTCATCTCCTCTGGAGATGAagatgagtgagtgagtgtatatctaaaaactaaagaaaaatcTTGTAAGTGGAACAAAATCAGAATGTGCAGCAGGACAAATGTAGGAATAAAACATatatcaaataaaatatattgtaaAATATAATACTGTGGTAGCCTGGTGAGTAATAGTAAAATGTTTAAACTGTAATGTAAACAGGTTGTGCACCATGTATATGTAACAGTATGGAACGACTAAGTTGGAAACACGCTCCCTGAGTCGGATTTCGGAGTTGGGAAGTCGGAAAAACTTACAGTACCCAGAGCAAAACGACATCGAAATTCAACATAGCTTTGGATCTTAGCCAGTCATGCAATGATTTCCATAAGCTTTGAATCATATCAAGTCTTAAACTCATCGAATTGAAGTATGTCACCATTTTCGTCCATCAGATGCACAATAGACCATATTTGTTTCTCCATCCAGTCTTCCATAAATCTAGACTTTCATTTACTTGAAATGAATCTATTATTCCACAGTGGGGCATTGTGAGGGCTAAAATAATGTGTATGAATAATTTTCCAGTGTAATAGGACCTGTTGGTGGAAGGCAGAATTTTAACTGGCAGTTTAGATAtttcaaaattacattttaacagaAACTCAATACTTCCTATAATTTATTGAACACAAGTGATGTAATGAGAACCACACCTCTTTACAATTTCTTAAAAAGATTGAAGCCACTTCATTTTAATACACTCTCAACATCTAATGCTTTAGTCCCACCTTCTTCATAACTTTTGAGCAAATCTCCTTTTTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247278 True 1351 lncRNA 0.41 1 5981404 5982754

Neighbor

gene id symbol gene type direction distance location
lrfn2b LOC103354004,LOC104943823 coding downstream 393167 5389153 ~ 5588237 (-)
LOC120547345 NA coding downstream 701684 5259465 ~ 5279720 (-)
LOC120547277 NA coding downstream 727704 5247945 ~ 5253700 (-)
LOC120546193 NA coding downstream 857623 5115179 ~ 5123781 (-)
LOC120546227 htr1e coding downstream 1067213 4871142 ~ 4914191 (-)
gopc gopc coding upstream 3683 5986437 ~ 6009440 (-)
LOC120546792 LOC104959018 coding upstream 87792 6070546 ~ 6073220 (-)
LOC120546794 NA coding upstream 480186 6462940 ~ 6464802 (-)
meis2b LOC104938729,LOC103355645,LOC105017579 coding upstream 779957 6762711 ~ 6800793 (-)
cnih3 cnih3,LOC108248696,LOC101155158,LOC107095392,LOC106527994,LOC107384796,LOC100708389,LOC103358879,LOC101472542 coding upstream 1462107 7444861 ~ 7588065 (-)
G182513 NA non-coding downstream 5014 5976121 ~ 5976390 (-)
LOC120546803 NA non-coding downstream 6505 5970833 ~ 5974899 (-)
G182507 NA non-coding downstream 25454 5930663 ~ 5955950 (-)
G182501 NA non-coding downstream 70288 5910695 ~ 5911116 (-)
G182472 NA non-coding downstream 203661 5777252 ~ 5777743 (-)
G182517 NA non-coding upstream 2096 5984850 ~ 5985303 (-)
G182562 NA non-coding upstream 115661 6098415 ~ 6098646 (-)
G182566 NA non-coding upstream 144851 6127605 ~ 6128535 (-)
G182567 NA non-coding upstream 145829 6128583 ~ 6128828 (-)
G182574 NA non-coding upstream 176811 6159565 ~ 6159858 (-)
G182502 NA other downstream 69495 5911312 ~ 5911909 (-)
G182474 NA other downstream 188466 5790289 ~ 5792938 (-)
zgc:112001 LOC103354005,LOC100690140,LOC102211542,LOC102799045,LOC102300982 other downstream 667689 5311506 ~ 5313715 (-)
smim8 smim8 other downstream 1177912 4745773 ~ 4803492 (-)
G182121 NA other downstream 1815408 4163358 ~ 4165996 (-)
cgrrf1 NA other upstream 249988 6232742 ~ 6269143 (-)
G182764 NA other upstream 717737 6700491 ~ 6701117 (-)
G182952 NA other upstream 1778811 7761565 ~ 7766386 (-)
G182977 NA other upstream 2041961 8024715 ~ 8025044 (-)
opn5 opn5,LOC102784832,LOC100710023,LOC102313452,LOC104967814,LOC106933152,LOC108249775 other upstream 2066704 8049458 ~ 8126664 (-)

Expression


Co-expression Network