G182578


Basic Information

Item Value
gene id G182578
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 6164762 ~ 6165424 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU247346
GCAGCACATTCCACTAATCAACCAGCAGTTATCAACCCGGGCTGTTCACATCTCCAGCACCAGTTCGTTTCTACATTACCAGTGGCTACCTGCTGACTTCCTGCCGCTCCCCTGCTGTGACCTGCTCACCTGCTCCCTGCTCACCCTGTGCTCACCACGCCACTCAGCTCTCATCACGGCTTGCCTCGCCACTCGGCTCTCATTGCTGCCTGCTCACCATGCCACTCAGCTCTCATTGCTACCTGCTCACTACGTCACTCCGCTCTCATCACGGCTTGCCTCGCCACTCAGCTCTCATTGCTGCCTGCTCACCATGCCACTCAGCTCTCATTGCTACCTGCTCACCACGCCACTCCGCTCTCATCACGGCTTGCCTCGCCACTCAGCTCTCATTGCTGCCTGCATAGGCGGCGCTAGgctatttttttgaaaataaagtcCTTATTGTGATAATGTGAAATCGTTTAGTGCTCAAACTAGTGGCGGTTTTTGGCACGGGCGAACCGGGCAGCCacttaacttaaaaaataaataatcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247346 True 539 lncRNA 0.54 2 6164762 6165424

Neighbor

gene id symbol gene type direction distance location
LOC120546792 LOC104959018 coding downstream 91542 6070546 ~ 6073220 (-)
gopc gopc coding downstream 155322 5986437 ~ 6009440 (-)
lrfn2b LOC103354004,LOC104943823 coding downstream 576525 5389153 ~ 5588237 (-)
LOC120547345 NA coding downstream 885042 5259465 ~ 5279720 (-)
LOC120547277 NA coding downstream 911062 5247945 ~ 5253700 (-)
LOC120546794 NA coding upstream 297516 6462940 ~ 6464802 (-)
meis2b LOC104938729,LOC103355645,LOC105017579 coding upstream 597287 6762711 ~ 6800793 (-)
cnih3 cnih3,LOC108248696,LOC101155158,LOC107095392,LOC106527994,LOC107384796,LOC100708389,LOC103358879,LOC101472542 coding upstream 1279437 7444861 ~ 7588065 (-)
LOC120546734 cd2ap coding upstream 2086292 8251716 ~ 8340747 (-)
LOC120546378 NA coding upstream 2383755 8549179 ~ 8550180 (-)
G182577 NA non-coding downstream 325 6164215 ~ 6164437 (-)
G182574 NA non-coding downstream 4904 6159565 ~ 6159858 (-)
G182567 NA non-coding downstream 35934 6128583 ~ 6128828 (-)
G182566 NA non-coding downstream 36227 6127605 ~ 6128535 (-)
G182562 NA non-coding downstream 66116 6098415 ~ 6098646 (-)
G182580 psmc6 non-coding upstream 3899 6169323 ~ 6188026 (-)
G182694 LOC103355641,LOC104938520 non-coding upstream 118094 6283518 ~ 6284813 (-)
G182710 NA non-coding upstream 194037 6359461 ~ 6361479 (-)
G182711 NA non-coding upstream 207063 6372487 ~ 6373198 (-)
G182714 NA non-coding upstream 215784 6381208 ~ 6407923 (-)
G182502 NA other downstream 252853 5911312 ~ 5911909 (-)
G182474 NA other downstream 371824 5790289 ~ 5792938 (-)
zgc:112001 LOC103354005,LOC100690140,LOC102211542,LOC102799045,LOC102300982 other downstream 851047 5311506 ~ 5313715 (-)
smim8 smim8 other downstream 1361270 4745773 ~ 4803492 (-)
G182121 NA other downstream 1998766 4163358 ~ 4165996 (-)
cgrrf1 NA other upstream 67318 6232742 ~ 6269143 (-)
G182764 NA other upstream 535067 6700491 ~ 6701117 (-)
G182952 NA other upstream 1596141 7761565 ~ 7766386 (-)
G182977 NA other upstream 1859291 8024715 ~ 8025044 (-)
opn5 opn5,LOC102784832,LOC100710023,LOC102313452,LOC104967814,LOC106933152,LOC108249775 other upstream 1884034 8049458 ~ 8126664 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G242947 NA non-coding CI01000056 null 1608595 ~ 1609136 (+)