cgrrf1


Basic Information

Item Value
gene id cgrrf1
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 6232742 ~ 6269143 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU247463
tgtgtttccgcacggaggattattactagcgcacaagaggtttgcgcttctgcggacacaagactgacggcccatattacaaatgaaggaagacgaaaatagcgagggtctaaaagggagagacaggcgagagaaaacgacagaaagtttgggatcattttaagctgcaaacatgctgctacatcacctctgtaacaaacctccagtgtactcatccattccacagagccaacccgacacaagATTCAGGGAATCAGGCACCTGCATGATATGTGAATGTTTCGTTTTTCGTTTCATTCCTTTTGGAGGTCGGTGGAAACCAGGTAAAGGGGCCTGACACACTGTAGCATACTTCCCAGAAAGAGAGATAGGCTCAACTATGAAATTGTGTTAAGCATCTATGTTTAGAAGTTGGGATGGCACCCACACTGTACTGTGTGATCCTAATTTCTCCTCCATTAagtgttcattaaatgctcCTGTGTAATTCCTCAAGGTCTCCTGAACCtgtatgtgaaatgagttgtgctgctcctgagttccTCATAACAACGATTTCTAAG
>XM_039781988.1
TTCTATCTAAGGAGTTCCTGTTATGGCTGTCATGGAAAGTGTTTACCAGTGGATTTTTCAATAACGTTTCTTAGAAATCATATGAAATGGCAGCGGTTTTCCTGGTGACCTTGTATGAGTACTCCCCATTGTTTTACATAAGTGTGGTTTCTTTGTGTTTCGTTGTTACCGCCGCCATGGTGATGGGCTGGTTTGGCTTTGATGTCCCAGTGATCCTTCGCAGCTCTGATGAAACAGAGTCCCATCTACCAACCCCTGAGAAGCAAATGGTTCAGATGACCAATCCTTTCACCCTTGAGTTGGGATCTGGGCCAGCATCTGTCACTGATGGTGTGTCAGTGAGACCTTGCTGTCTGGAGCCCTGTGTCCTGAGCTGTTTCTGGGGCTGTAAGGTCAGTGCCCTGCAGGGAGCACTGCAGGCCCACCAGCATGGTCTGAAGCTCAGCACCCCCCAACATTTTCTGGAAGCCCTGCACCTCCACTATCACAACTGCCAGATCTTCCATATCGGCAATGAAGATCGAGTGGAACGCCACACACAGATTCCTGCTGACCATGAGATCAAAGATTTTGGGCTTTTGCCAAGGGAACACTACCCTCTTCTGGCTGTGCTGACGCTGGCAGAGCCAGAAGCCAGAGATGCATACAACATTGTGGCTAGTGTGACAGTTATTCATGTTCCTGATGACAAATACAGCCTTTCTGCACGGGTTCTCTTTCAGTACCTTCTCACCTCACAAGGGAACATGTACGAGTTAAAGCCTCTCTTCATGTCAGCTGCCAGTAGGGGGGCATCTGAGCCCTTCGACTCAGAGCAGAATACCCAACCCAGTGAACCCAATGACGAGGCCAGCAGAGTCGAGCAGAGTccagtggtggaggaggaggagaatgaCTGGTCAGAGGGAAAGGGCAGAGACTGTGTGGTCTGTCAGAATGCAGCGGTGAACAAGGTGTTGCTGCCCTGCAGACacgcctgtgtgtgtgacagctgtGTGTCACACTTCCAGCACTGCCCCATCTGCAGGGCCTTCGTCCAGGAGTCCTTCACCCTGACACAGGGACCAGCTGCAGAACAATGACTCCATACCGAACCAGTGAATGTTATTTAAGAAATAATTTGCAGCAAGACAGGCATCATTGCAAATAAACCCTGACGCCAAATCTT
>XM_039781989.1
attccacagagccaacccgacacaagATTCAGGGAATCAGGCACCTGCATGATATGTGAATGTTTCGTTTTTCGTTTCATTCCTTTTGGAGGTCGGTGGAAACCAGGTTTGGCTTTGATGTCCCAGTGATCCTTCGCAGCTCTGATGAAACAGAGTCCCATCTACCAACCCCTGAGAAGCAAATGGTTCAGATGACCAATCCTTTCACCCTTGAGTTGGGATCTGGGCCAGCATCTGTCACTGATGGTGTGTCAGTGAGACCTTGCTGTCTGGAGCCCTGTGTCCTGAGCTGTTTCTGGGGCTGTAAGGTCAGTGCCCTGCAGGGAGCACTGCAGGCCCACCAGCATGGTCTGAAGCTCAGCACCCCCCAACATTTTCTGGAAGCCCTGCACCTCCACTATCACAACTGCCAGATCTTCCATATCGGCAATGAAGATCGAGTGGAACGCCACACACAGATTCCTGCTGACCATGAGATCAAAGATTTTGGGCTTTTGCCAAGGGAACACTACCCTCTTCTGGCTGTGCTGACGCTGGCAGAGCCAGAAGCCAGAGATGCATACAACATTGTGGCTAGTGTGACAGTTATTCATGTTCCTGATGACAAATACAGCCTTTCTGCACGGGTTCTCTTTCAGTACCTTCTCACCTCACAAGGGAACATGTACGAGTTAAAGCCTCTCTTCATGTCAGCTGCCAGTAGGGGGGCATCTGAGCCCTTCGACTCAGAGCAGAATACCCAACCCAGTGAACCCAATGACGAGGCCAGCAGAGTCGAGCAGAGTccagtggtggaggaggaggagaatgaCTGGTCAGAGGGAAAGGGCAGAGACTGTGTGGTCTGTCAGAATGCAGCGGTGAACAAGGTGTTGCTGCCCTGCAGACacgcctgtgtgtgtgacagctgtGTGTCACACTTCCAGCACTGCCCCATCTGCAGGGCCTTCGTCCAGGAGTCCTTCACCCTGACACAGGGACCAGCTGCAGAACAATGACTCCATACCGAACCAGTGAATGTTATTTAAGAAATAATTTGCAGCAAGACAGGCATCATTGCAAATAAACCCTGACGCCAAATCTT
>XM_039781990.1
GAAATCATATGAAATGGCAGCGGTTTTCCTGGTGACCTTGTATGAGTACTCCCCATTGTTTTACATAAGTGTGGTTTCTTTGTGTTTCGTTGTTACCGCCGCCATGGTGATGGGCTGGTAGTCTGAGTGACCTGATGCTCAGTCCTGAAGCTTTTCCTGAACTTAACAGACTCTCCTCACAGTACGAAAAACCATCAGAGGAGAAACAGCGTCAGGAAACTCTCAGTATCCTCAGAAAGATGCATCAGGATTACTAGCAACAGTTTGGCTTTGATGTCCCAGTGATCCTTCGCAGCTCTGATGAAACAGAGTCCCATCTACCAACCCCTGAGAAGCAAATGGTTCAGATGACCAATCCTTTCACCCTTGAGTTGGGATCTGGGCCAGCATCTGTCACTGATGGTGTGTCAGTGAGACCTTGCTGTCTGGAGCCCTGTGTCCTGAGCTGTTTCTGGGGCTGTAAGGTCAGTGCCCTGCAGGGAGCACTGCAGGCCCACCAGCATGGTCTGAAGCTCAGCACCCCCCAACATTTTCTGGAAGCCCTGCACCTCCACTATCACAACTGCCAGATCTTCCATATCGGCAATGAAGATCGAGTGGAACGCCACACACAGATTCCTGCTGACCATGAGATCAAAGATTTTGGGCTTTTGCCAAGGGAACACTACCCTCTTCTGGCTGTGCTGACGCTGGCAGAGCCAGAAGCCAGAGATGCATACAACATTGTGGCTAGTGTGACAGTTATTCATGTTCCTGATGACAAATACAGCCTTTCTGCACGGGTTCTCTTTCAGTACCTTCTCACCTCACAAGGGAACATGTACGAGTTAAAGCCTCTCTTCATGTCAGCTGCCAGTAGGGGGGCATCTGAGCCCTTCGACTCAGAGCAGAATACCCAACCCAGTGAACCCAATGACGAGGCCAGCAGAGTCGAGCAGAGTccagtggtggaggaggaggagaatgaCTGGTCAGAGGGAAAGGGCAGAGACTGTGTGGTCTGTCAGAATGCAGCGGTGAACAAGGTGTTGCTGCCCTGCAGACacgcctgtgtgtgtgacagctgtGTGTCACACTTCCAGCACTGCCCCATCTGCAGGGCCTTCGTCCAGGAGTCCTTCACCCTGACACAGGGACCAGCTGCAGAACAATGACTCCATACCGAACCAGTGAATGTTATTTAAGAAATAATTTGCAGCAAGACAGGCATCATTGCAAATAAACCCTGACGCCAAATCTT
>XM_039781991.1
AGATTCAGGGAATCAGGCACCTGCATGATATGTGAATGTTTCGTTTTTCGTTTCATTCCTTTTGGAGGTCGGTGGAAACCAGGTAGTCTGAGTGACCTGATGCTCAGTCCTGAAGCTTTTCCTGAACTTAACAGACTCTCCTCACAGTACGAAAAACCATCAGAGGAGAAACAGCGTCAGGAAACTCTCAGTATCCTCAGAAAGATGCATCAGGATTACTAGCAACAGTTTGGCTTTGATGTCCCAGTGATCCTTCGCAGCTCTGATGAAACAGAGTCCCATCTACCAACCCCTGAGAAGCAAATGGTTCAGATGACCAATCCTTTCACCCTTGAGTTGGGATCTGGGCCAGCATCTGTCACTGATGGTGTGTCAGTGAGACCTTGCTGTCTGGAGCCCTGTGTCCTGAGCTGTTTCTGGGGCTGTAAGGTCAGTGCCCTGCAGGGAGCACTGCAGGCCCACCAGCATGGTCTGAAGCTCAGCACCCCCCAACATTTTCTGGAAGCCCTGCACCTCCACTATCACAACTGCCAGATCTTCCATATCGGCAATGAAGATCGAGTGGAACGCCACACACAGATTCCTGCTGACCATGAGATCAAAGATTTTGGGCTTTTGCCAAGGGAACACTACCCTCTTCTGGCTGTGCTGACGCTGGCAGAGCCAGAAGCCAGAGATGCATACAACATTGTGGCTAGTGTGACAGTTATTCATGTTCCTGATGACAAATACAGCCTTTCTGCACGGGTTCTCTTTCAGTACCTTCTCACCTCACAAGGGAACATGTACGAGTTAAAGCCTCTCTTCATGTCAGCTGCCAGTAGGGGGGCATCTGAGCCCTTCGACTCAGAGCAGAATACCCAACCCAGTGAACCCAATGACGAGGCCAGCAGAGTCGAGCAGAGTccagtggtggaggaggaggagaatgaCTGGTCAGAGGGAAAGGGCAGAGACTGTGTGGTCTGTCAGAATGCAGCGGTGAACAAGGTGTTGCTGCCCTGCAGACacgcctgtgtgtgtgacagctgtGTGTCACACTTCCAGCACTGCCCCATCTGCAGGGCCTTCGTCCAGGAGTCCTTCACCCTGACACAGGGACCAGCTGCAGAACAATGACTCCATACCGAACCAGTGAATGTTATTTAAGAAATAATTTGCAGCAAGACAGGCATCATTGCAAATAAACCCTGACGCCAAATCTT
>XM_039781992.1
cagaaaaagaaaaaaaacgatacccaaccctactctggGTCCTTCAGTCCTATAATGCGAATGAGGAAATCAGAGAATTGTTTCAGATGATGTTTCCCGACTCTGACATCTGTcgttttttgtttagtttttattgttgtgaTATAAGTCTTAAAATTCATTCATAATGTCTTAAAGTCCTAAATTTGACTTGTTGGAACCTGCTGAAACCCTGAGCCTGCTTTCTCTGTAGTTATCATCCGCTCATGAACTGCTAACCGACAAGCAGGCAACAAAGTCCCAGTTCACTCGTACGCATACTTTCCGCACTACGTGTCCGTGGACAACTGCAGACTTGTACCGGTCGCAGGCAGCCCTGATGTTACGTCCATTGTTGTGGCCACTTTTCTGGAACAGCTTGCGCAACcaacacaagtccacagcgTTCGGCGGCGTGTATGTCTGAGCCTGTCTACATCGCATCCACCTGCAgtgttgtcagctgtgtgtctgcctgatATACTTTGTGTGTAGGACGCCATTCCTCAttgatatagtgacatttagCTCTTTGTTGTGAGCACCGTCCAGCAGATCTTCAAACGCTTTGCTAGTGCAAAGTTAGCACTAGCAAGCACTAGCAACTTGCTAGTACAAGCACTAGCAGTTAAATAGTTAATTATTAACATCCCCAGTGTCATGTCATCCTTGATGAGCTCAAGCGACTTatcctgtctttctttctcttatgAGGCTTTGACCGGCTTTCCTCCTTTCCCACCTCCTGGTTACCCTCTGCTGTACTTGGCCCTGGTTTGGCTTTGATGTCCCAGTGATCCTTCGCAGCTCTGATGAAACAGAGTCCCATCTACCAACCCCTGAGAAGCAAATGGTTCAGATGACCAATCCTTTCACCCTTGAGTTGGGATCTGGGCCAGCATCTGTCACTGATGGTGTGTCAGTGAGACCTTGCTGTCTGGAGCCCTGTGTCCTGAGCTGTTTCTGGGGCTGTAAGGTCAGTGCCCTGCAGGGAGCACTGCAGGCCCACCAGCATGGTCTGAAGCTCAGCACCCCCCAACATTTTCTGGAAGCCCTGCACCTCCACTATCACAACTGCCAGATCTTCCATATCGGCAATGAAGATCGAGTGGAACGCCACACACAGATTCCTGCTGACCATGAGATCAAAGATTTTGGGCTTTTGCCAAGGGAACACTACCCTCTTCTGGCTGTGCTGACGCTGGCAGAGCCAGAAGCCAGAGATGCATACAACATTGTGGCTAGTGTGACAGTTATTCATGTTCCTGATGACAAATACAGCCTTTCTGCACGGGTTCTCTTTCAGTACCTTCTCACCTCACAAGGGAACATGTACGAGTTAAAGCCTCTCTTCATGTCAGCTGCCAGTAGGGGGGCATCTGAGCCCTTCGACTCAGAGCAGAATACCCAACCCAGTGAACCCAATGACGAGGCCAGCAGAGTCGAGCAGAGTccagtggtggaggaggaggagaatgaCTGGTCAGAGGGAAAGGGCAGAGACTGTGTGGTCTGTCAGAATGCAGCGGTGAACAAGGTGTTGCTGCCCTGCAGACacgcctgtgtgtgtgacagctgtGTGTCACACTTCCAGCACTGCCCCATCTGCAGGGCCTTCGTCCAGGAGTCCTTCACCCTGACACAGGGACCAGCTGCAGAACAATGACTCCATACCGAACCAGTGAATGTTATTTAAGAAATAATTTGCAGCAAGACAGGCATCATTGCAAATAAACCCTGACGCCAAATCTT

Function

NR:

description
cell growth regulator with RING finger domain protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247463 False 563 lncRNA 0.45 2 6267152 6269143
XM_039781988.1 False 1168 mRNA 0.51 6 6232742 6257135
XM_039781989.1 False 1084 mRNA 0.52 7 6232742 6268926
XM_039781990.1 False 1240 mRNA 0.51 7 6232742 6257062
XM_039781991.1 False 1205 mRNA 0.51 7 6232742 6267473
XM_039781992.1 True 1770 mRNA 0.49 6 6232742 6247875

Neighbor

gene id symbol gene type direction distance location
LOC120546792 LOC104959018 coding downstream 159522 6070546 ~ 6073220 (-)
gopc gopc coding downstream 223302 5986437 ~ 6009440 (-)
lrfn2b LOC103354004,LOC104943823 coding downstream 644505 5389153 ~ 5588237 (-)
LOC120547345 NA coding downstream 953022 5259465 ~ 5279720 (-)
LOC120547277 NA coding downstream 979042 5247945 ~ 5253700 (-)
LOC120546794 NA coding upstream 193797 6462940 ~ 6464802 (-)
meis2b LOC104938729,LOC103355645,LOC105017579 coding upstream 493568 6762711 ~ 6800793 (-)
cnih3 cnih3,LOC108248696,LOC101155158,LOC107095392,LOC106527994,LOC107384796,LOC100708389,LOC103358879,LOC101472542 coding upstream 1175718 7444861 ~ 7588065 (-)
LOC120546734 cd2ap coding upstream 1982573 8251716 ~ 8340747 (-)
LOC120546378 NA coding upstream 2280036 8549179 ~ 8550180 (-)
G182580 psmc6 non-coding downstream 44716 6169323 ~ 6188026 (-)
G182578 NA non-coding downstream 67318 6164762 ~ 6165424 (-)
G182577 NA non-coding downstream 68305 6164215 ~ 6164437 (-)
G182574 NA non-coding downstream 72884 6159565 ~ 6159858 (-)
G182567 NA non-coding downstream 103914 6128583 ~ 6128828 (-)
G182694 LOC103355641,LOC104938520 non-coding upstream 14375 6283518 ~ 6284813 (-)
G182710 NA non-coding upstream 90318 6359461 ~ 6361479 (-)
G182711 NA non-coding upstream 103344 6372487 ~ 6373198 (-)
G182714 NA non-coding upstream 112065 6381208 ~ 6407923 (-)
G182741 NA non-coding upstream 308950 6578093 ~ 6593825 (-)
G182502 NA other downstream 320833 5911312 ~ 5911909 (-)
G182474 NA other downstream 439804 5790289 ~ 5792938 (-)
zgc:112001 LOC103354005,LOC100690140,LOC102211542,LOC102799045,LOC102300982 other downstream 919027 5311506 ~ 5313715 (-)
smim8 smim8 other downstream 1429250 4745773 ~ 4803492 (-)
G182121 NA other downstream 2066746 4163358 ~ 4165996 (-)
G182764 NA other upstream 431348 6700491 ~ 6701117 (-)
G182952 NA other upstream 1492422 7761565 ~ 7766386 (-)
G182977 NA other upstream 1755572 8024715 ~ 8025044 (-)
opn5 opn5,LOC102784832,LOC100710023,LOC102313452,LOC104967814,LOC106933152,LOC108249775 other upstream 1780315 8049458 ~ 8126664 (-)
LOC120546397 NA other upstream 2512185 8781328 ~ 8787218 (-)

Expression


Co-expression Network