G182694 (LOC103355641,LOC104938520)


Basic Information

Item Value
gene id G182694
gene name LOC103355641,LOC104938520
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 6283518 ~ 6284813 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU247473
gtgttagtgtgtgttaacacagtctGATGGTTAGAACTAATCAATGACAGTTCCTAATTTTATACAAATGCTGCCTGCAACGCTTCCTCTCTGACACAGTCCAAAAcagtttgcttcccctctcacacatctgacactcatcacctgggtcttaacttaatgcctgtcctgtgataatggcccttacttctatcatacttctatctcctattaagtgagatcacattgtatggtcacttattcctaatatacttctatcatacttctatctcctattaactgaggtcacattgtatggtcacttattcctaatatacttctatcatacttctatctcctattaagtgagatcacattgcaTGGtaacttattcctaatatgaactgtttcaaatgaaacctCAAATGCAGGACACTGATTGCATGAGAAGAAGTTTGTCTGTAggagtttgtaaatggcagcctgtgcccttttgtagtgtgtacatatTATTTCTCATCACACTGtgataactgtgattaaattcagtatatatacgtctgccatatgttgccacccctcaaaaattcctgcccccctctcgccaccccagaaatatttttctagatccgcccctgacTGGGAATAtggattgaattgaattgaataaatatTACCTCTGCTTAAAACATGGACAAGTAGTGGAATCTTCTGTACCTTCAACTTTAGGTAAATTTTACACCAAAACAGAAGTGGAATTGACTTCCTCACCTGCTCCAGAAAAATAACCTGTGCAGTACCTGAGGCGTGTGAGTCTTAGCTGCTCCTGAAGGTAGTGCTCCTCATCACTCGACCAGTAGACCATTGTCTCCTCAGGGTCTGGCGATTCTTGATGGTGAAAGCGCAAAGGGTCCCAGCCCGTCATGATGTCATAAGTGATGACGCAGCCCAGTGAGTGTGATACTATGGACACCTTCCCATTTTTCTCAAAGTCTGGATTTCGCGAGCAGAAGAGTGAGTACAGACGATTCAGCTCCAGAGTCAAACCCCTGGTTat

Function

NR:

description
PREDICTED: phospholipase DDHD1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247473 True 1036 lncRNA 0.42 2 6283518 6284813

Neighbor

gene id symbol gene type direction distance location
LOC120546792 LOC104959018 coding downstream 210298 6070546 ~ 6073220 (-)
gopc gopc coding downstream 274078 5986437 ~ 6009440 (-)
lrfn2b LOC103354004,LOC104943823 coding downstream 695281 5389153 ~ 5588237 (-)
LOC120547345 NA coding downstream 1003798 5259465 ~ 5279720 (-)
LOC120547277 NA coding downstream 1029818 5247945 ~ 5253700 (-)
LOC120546794 NA coding upstream 178127 6462940 ~ 6464802 (-)
meis2b LOC104938729,LOC103355645,LOC105017579 coding upstream 477898 6762711 ~ 6800793 (-)
cnih3 cnih3,LOC108248696,LOC101155158,LOC107095392,LOC106527994,LOC107384796,LOC100708389,LOC103358879,LOC101472542 coding upstream 1160048 7444861 ~ 7588065 (-)
LOC120546734 cd2ap coding upstream 1966903 8251716 ~ 8340747 (-)
LOC120546378 NA coding upstream 2264366 8549179 ~ 8550180 (-)
G182580 psmc6 non-coding downstream 95492 6169323 ~ 6188026 (-)
G182578 NA non-coding downstream 118094 6164762 ~ 6165424 (-)
G182577 NA non-coding downstream 119081 6164215 ~ 6164437 (-)
G182574 NA non-coding downstream 123660 6159565 ~ 6159858 (-)
G182567 NA non-coding downstream 154690 6128583 ~ 6128828 (-)
G182710 NA non-coding upstream 74648 6359461 ~ 6361479 (-)
G182711 NA non-coding upstream 87674 6372487 ~ 6373198 (-)
G182714 NA non-coding upstream 96395 6381208 ~ 6407923 (-)
G182741 NA non-coding upstream 293280 6578093 ~ 6593825 (-)
G182759 NA non-coding upstream 344920 6629733 ~ 6630135 (-)
cgrrf1 NA other downstream 14375 6232742 ~ 6269143 (-)
G182502 NA other downstream 371609 5911312 ~ 5911909 (-)
G182474 NA other downstream 490580 5790289 ~ 5792938 (-)
zgc:112001 LOC103354005,LOC100690140,LOC102211542,LOC102799045,LOC102300982 other downstream 969803 5311506 ~ 5313715 (-)
smim8 smim8 other downstream 1480026 4745773 ~ 4803492 (-)
G182764 NA other upstream 415678 6700491 ~ 6701117 (-)
G182952 NA other upstream 1476752 7761565 ~ 7766386 (-)
G182977 NA other upstream 1739902 8024715 ~ 8025044 (-)
opn5 opn5,LOC102784832,LOC100710023,LOC102313452,LOC104967814,LOC106933152,LOC108249775 other upstream 1764645 8049458 ~ 8126664 (-)
LOC120546397 NA other upstream 2496515 8781328 ~ 8787218 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
mexican tetra (Astyanax mexicanus) G27875 NA non-coding NC_035899.1 CM008302.1 53327872 ~ 53330777 (+)