G182710


Basic Information

Item Value
gene id G182710
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 6359461 ~ 6361479 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU247491
ATTAAACAGGCTGTTGCAAAAATAACCAAAGAAACCTCTGTGCTTATGTGCACATCAAACTAGTCAGATATGATTAACAGACACATTAAAACAGTTCACAGAATTCCATGAAAAAACGTGGATCAATTAAATCTTCTCTCTCCACTAATAACTCCCTCAGAGCAGTCCATTCCTGCCAGTCCTCCCCCAGTGTCTCAATGATCCAAAACACTGGGTAACCGAAGCCCTGTTTTTAAAGATGTAAATAGGGAACGTGATTGCCCATGATTGTCAAAACCTGTAACACGCCCATTTATAATGTATTCTTTCTGATCCCACCCTGTATCCAGGTGTGCGCCAGGCGAACTGGGTCACAAAATTACCAATATGCCCCATAACCCTAAGCAAAGCTTGACTCACTACTTGACTGTGAGTTGTGCTGCTGGGTTGACAAAAAAGAGCCTGTGTGTTAGTTTCAGTCTGACTTTGGATTGAATTATCTTAAATACAAGGATGCATTGCTACTTTTTATGATCTCTCTTTTCATCCAGATGCTCTGCTGTCACATACTTTTCTTATCTGAAGTCTTACTCATGCACTGTATTTTACATGCAAAAAGCTGATTAGAAACCTGGTTATGCGTACATGGCAGAGAAATCAACTTTTTTCTGGACAAATCAGGTTTCTCAATCCCCTTTCTACGATTATGGACACCAAGTTTCTGTTTACATGAAAGAAatcaaaatttaaataaaaaaaacgtctGCAACCTGGTAACTCAAGTGCATGTAAATGAAGAGACCCTAAAGGTTGCAACTTTGTCGAGTAGGAttggaataaaacaaaacagggaCTGCGTCTTCTGTTTTACATGTGTAACTACGCTGCTCTGCTTACGTGGTGCTAAGCCTCCTGTGTAGACACAGTTTTAGTGTTAGGCAACTGTTGCTAATAGCAACAGCTAATGGTTTATTGAGACTGAGAAGTCTGTTTTGGAGTCTGTCTGCCCTCCAGTGGTCAAAAATAGTAAATGCTGCTTTAAACAGATTATCTGTTAAATATTCAGGTTTTAGGATTAAATGTACAATCACACAATGCACTGTACGCATTGTATTAAATAAAGAATTCCCTTTATCCTTGTCTATAATATGGCTCCCATGATCACTTGTGGGCTTCTTTGTCTCATGCCTCAGATGAGAATCTGAGGCATGAGATTATGAGAAATTATTAAACATATTTCACAAATGTACAAGGTTAGAACGGGATTAAGCCCTGGGGCTTTCTCtatggctatatatatatatatatatatatatatatatatatatccacaaTGAAGAACCAACAGAGCTTTGTGATTAGACAAGTAATCTTCAGTGGGATGACACTGATTCGGTAGGACATGGTAGGGTGCTTTGCACAGTAAACAGTTGTTGCTTTTGTTGAGAGAAGACCATGAAATCAAGGACAGgcacagtatactgtatatccgCTCAGTCTTTAGCAAAGGTCACATCGAGGTTAGTGTTTTTAGAGTAAAACAGGTGAGTGATTTGTTGGTGCTTCTGTCTATGTTGGGtcaattcattttaaattccctcatataacagctattttaatCATTATTTCGTCAGactaaatgtaaacataactgAAAGTAATAATTAGTCTTATATTTAATTttaccaatttaaaaaataagaattgtttcatttaaattaagaaaaaaaggaaaagtcttcattcttcatttcatgttccataaattgggcttttcatttgtttaaaaggcATGAACAGAAAGCAAAATGACCCCAGCCATGATGGCTCCATGTCAGTTTGCACGTTATGAGGTCTCTGGGTTATCTTCTGCAGGTTCAAGGGGCTCttgtggtctgtacatgaaggTGAGGAGGAACAGAGCCACATCATAAGAGCACCAATAGGCCGTGTGTGAGGTCACTGCTGACCAATAGCGGCTCTCCACCAAGCCCTCCCGCAGCTCAAAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247491 True 1989 lncRNA 0.38 2 6359461 6361479

Neighbor

gene id symbol gene type direction distance location
LOC120546792 LOC104959018 coding downstream 286241 6070546 ~ 6073220 (-)
gopc gopc coding downstream 350021 5986437 ~ 6009440 (-)
lrfn2b LOC103354004,LOC104943823 coding downstream 771224 5389153 ~ 5588237 (-)
LOC120547345 NA coding downstream 1079741 5259465 ~ 5279720 (-)
LOC120547277 NA coding downstream 1105761 5247945 ~ 5253700 (-)
LOC120546794 NA coding upstream 101461 6462940 ~ 6464802 (-)
meis2b LOC104938729,LOC103355645,LOC105017579 coding upstream 401232 6762711 ~ 6800793 (-)
cnih3 cnih3,LOC108248696,LOC101155158,LOC107095392,LOC106527994,LOC107384796,LOC100708389,LOC103358879,LOC101472542 coding upstream 1083382 7444861 ~ 7588065 (-)
LOC120546734 cd2ap coding upstream 1890237 8251716 ~ 8340747 (-)
LOC120546378 NA coding upstream 2187700 8549179 ~ 8550180 (-)
G182694 LOC103355641,LOC104938520 non-coding downstream 74648 6283518 ~ 6284813 (-)
G182580 psmc6 non-coding downstream 171435 6169323 ~ 6188026 (-)
G182578 NA non-coding downstream 194037 6164762 ~ 6165424 (-)
G182577 NA non-coding downstream 195024 6164215 ~ 6164437 (-)
G182574 NA non-coding downstream 199603 6159565 ~ 6159858 (-)
G182711 NA non-coding upstream 11008 6372487 ~ 6373198 (-)
G182714 NA non-coding upstream 19729 6381208 ~ 6407923 (-)
G182741 NA non-coding upstream 216614 6578093 ~ 6593825 (-)
G182759 NA non-coding upstream 268254 6629733 ~ 6630135 (-)
G182762 NA non-coding upstream 309762 6671241 ~ 6672648 (-)
cgrrf1 NA other downstream 90318 6232742 ~ 6269143 (-)
G182502 NA other downstream 447552 5911312 ~ 5911909 (-)
G182474 NA other downstream 566523 5790289 ~ 5792938 (-)
zgc:112001 LOC103354005,LOC100690140,LOC102211542,LOC102799045,LOC102300982 other downstream 1045746 5311506 ~ 5313715 (-)
smim8 smim8 other downstream 1555969 4745773 ~ 4803492 (-)
G182764 NA other upstream 339012 6700491 ~ 6701117 (-)
G182952 NA other upstream 1400086 7761565 ~ 7766386 (-)
G182977 NA other upstream 1663236 8024715 ~ 8025044 (-)
opn5 opn5,LOC102784832,LOC100710023,LOC102313452,LOC104967814,LOC106933152,LOC108249775 other upstream 1687979 8049458 ~ 8126664 (-)
LOC120546397 NA other upstream 2419849 8781328 ~ 8787218 (-)

Expression


Co-expression Network