G183006


Basic Information

Item Value
gene id G183006
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 8191178 ~ 8191474 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU247850
atacgatctcatattgtactaaaatagttcaccgaaacgtgtttctgaaaacattttaagcgagaaataggccatgcagttgctgaatctgtcttcatttcagatcgacaaaggtcagtttaaaagattttcgtcagattttgagagacaccgagccgaccgctcctcaagtggagtggggtgccgctgcaggtcacgtcacgtgcagaaatgtccagtgggagagaggctgcccagagctggaggatgcgccagcgtcgtttatagtctggtgtgtgggaacattttggatttcat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247850 True 297 lncRNA 0.47 1 8191178 8191474

Neighbor

gene id symbol gene type direction distance location
cnih3 cnih3,LOC108248696,LOC101155158,LOC107095392,LOC106527994,LOC107384796,LOC100708389,LOC103358879,LOC101472542 coding downstream 603113 7444861 ~ 7588065 (-)
meis2b LOC104938729,LOC103355645,LOC105017579 coding downstream 1390385 6762711 ~ 6800793 (-)
LOC120546794 NA coding downstream 1726376 6462940 ~ 6464802 (-)
LOC120546792 LOC104959018 coding downstream 2117958 6070546 ~ 6073220 (-)
gopc gopc coding downstream 2181738 5986437 ~ 6009440 (-)
LOC120546734 cd2ap coding upstream 60242 8251716 ~ 8340747 (-)
LOC120546378 NA coding upstream 357705 8549179 ~ 8550180 (-)
LOC120546379 LOC103375580 coding upstream 366995 8558469 ~ 8559470 (-)
LOC120546380 NA coding upstream 373669 8565143 ~ 8566141 (-)
LOC120546382 NA coding upstream 380929 8572403 ~ 8573320 (-)
G182983 NA non-coding downstream 143240 8047500 ~ 8047938 (-)
G182980 NA non-coding downstream 149374 8040623 ~ 8041804 (-)
G182962 NA non-coding downstream 337577 7852984 ~ 7853601 (-)
G182958 NA non-coding downstream 353443 7837522 ~ 7837735 (-)
G182957 NA non-coding downstream 354381 7836593 ~ 7836797 (-)
G183013 NA non-coding upstream 54091 8245565 ~ 8245765 (-)
G183027 NA non-coding upstream 239888 8431362 ~ 8431674 (-)
G183042 NA non-coding upstream 287438 8478912 ~ 8479346 (-)
G183068 NA non-coding upstream 579814 8771288 ~ 8771585 (-)
G183136 NA non-coding upstream 807101 8998575 ~ 8998828 (-)
opn5 opn5,LOC102784832,LOC100710023,LOC102313452,LOC104967814,LOC106933152,LOC108249775 other downstream 64514 8049458 ~ 8126664 (-)
G182977 NA other downstream 166134 8024715 ~ 8025044 (-)
G182952 NA other downstream 424792 7761565 ~ 7766386 (-)
G182764 NA other downstream 1490061 6700491 ~ 6701117 (-)
cgrrf1 NA other downstream 1922035 6232742 ~ 6269143 (-)
LOC120546397 NA other upstream 589854 8781328 ~ 8787218 (-)
LOC120546609 LOC104943934,LOC103373611,LOC100711814,LOC102780583,LOC101487794,LOC102295678 other upstream 829486 9020960 ~ 9024565 (-)
G183176 NA other upstream 938099 9129573 ~ 9133472 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other upstream 1908004 10099478 ~ 10101061 (-)
LOC120546776 NA other upstream 2263770 10455244 ~ 10610625 (-)

Expression


Co-expression Network