LOC120546397


Basic Information

Item Value
gene id LOC120546397
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 8781328 ~ 8787218 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU247995
taTGGCGTTATATTAGTGCCAAATGTCGAGAGCTCAGTGAAACATCTTCACGAGCAAATAATATTAATTCACACGCGCAGACACAGCAGCGAGCGAGGAAAAAACAGCAGCGAGAGAGGAACAAACAGCCGCGAGTGAGGAAAAAACAGCTGCGAGTGCACATAACAACCACTGGGGGGAATTACGCGCTCTCGAAAGTGAGCTCTGCTCCTGTGCTTTTATTCTGCTCGCTCGGAATGGTGTTTTGCTCGCTCGCGTTAGTCGACCTCCAATTTTGACAGGTTGTGGGAGGGAACAAACGCTGGCCCTCTTGTGATTGGTCATTTCCCACACGGAAGCCCAGGAAGGGATGGACCATGGTCTTGACCATAGAAAGCCAGCGAAGAAGAGACCTTGAAGACAAGAGGAGGACGGTTTATGAGCCACAAGTTGAAGGTAATGGCAGACCAAAATGAGGACAATTTACACAAGATGGCCAACAATATAGTGGCTATGTTGAGGACCACCTTGGGCAGTCTTTCCCAGGACTTTTTAGAGAAAGGCAGAATTCCCGTGCCGTAcggacaacaaaaaaaagacctgCCAGCAAAATAAACcatgtgcattttttcttgTTGGACCGTCCACGTGATAAAACCCCCAAACAGTCCGAAGAGCTCGCCCTCTTACAGGCCGGGATGGGGAGAAGGACCATTCAGGTCCCTGAGGGTGCTTGCCACAAGGAGATAACTTATCTTCTTTGTGAAGTCTACTTCAAAATGAATGAGCTGGAGGGGGCATGGATGCTCCATAAAGCCATGGGAGGGTCTGGTCAGAGGCGGTTGACCTTAGTCTCCCCAGATGAGATGGGTTACACGGGGGCTGGGCTGTTCAAGTCCTGGGGAGGCAAGGGCTGTCTATATGTGATGCCTATACAACACCGACTGGACATGTCTCCCCTGCCTTACACGGCACGGGAGTTTGAGGCAATGCCAAAAGCCAGGTGTGTGTCATGCAGTAAACATGTGCCGTTGCAGCTATTAAGTCTGCATGTGGAGACCTGTACAAAGCCGGAACTTGATGAGATCCACTCTGACTAcaatgatgatgttgatgaagGGGCTATACTGCAGCAATCTAATTTGGGGAGTACGGATTCCATGGAGCGTCCATCCTGCTCCCAAGTTCCTGATGTTAAAG
>XM_039781321.1
ctaTGGCGTTATATTAGTGCCAAATGTCGAGAGCTCAGTGAAACATCTTCACGAGCAAATAATATTAATTCACACGCGCAGACACAGCAGCGAGCGAGGAAAAAACAGCAGCGAGAGAGGAACAAACAGCCGCGAGTGAGGAAAAAACAGCTGCGAGTGCACATAACAACCACTGGGGGGAATTACGCGCTCTCGAAAGTGAGCTCTGCTCCTGTGCTTTTATTCTGCTCGCTCGGAATGGTGTTTTGCTCGCTCGCGTTAGTCGACCTCCAATTTTGACAGGTTGTGGGAGGGAACAAACGCTGGCCCTCTTGTGATTGGTCATTTCCCACACGGAAGCCCAGGAAGGGATGGACCATGGTCTTGACCATAGAAAGCCAGCGAAGAAGAGACCTTGAAGACAAGAGGAGGACGGTTTATGAGCCACAAGTTGAAGGTAATGGCAGACCAAAATGAGGACAATTTACACAAGATGGCCAACAATATAGTGGCTATGTTGAGGACCACCTTGGGCATTCAGGGACAGCCAAGGTCAGGTAGTGAGGAGCAGAGACCACAGGGACCACCAGGGACAGCCAGTGTACATGCAGGTTCCGGTTCTTCTGTGCAGCAGAACATGTCCAGGTCTTTCCCAGGACTTTTTAGAGAAAGGCAGAATTCCCGTGCCGTAcggacaacaaaaaaaagacctgCCAGCAAAATAAACcatgtgcattttttcttgTTGGACCGTCCACGTGATAAAACCCCCAAACAGTCCGAAGAGCTCGCCCTCTTACAGGCCGGGATGGGGAGAAGGACCATTCAGGTCCCTGAGGGTGCTTGCCACAAGGAGATAACTTATCTTCTTTGTGAAGTCTACTTCAAAATGAATGAGCTGGAGGGGGCATGGATGCTCCATAAAGCCATGGGAGGGTCTGGTCAGAGGCGGTTGACCTTAGTCTCCCCAGATGAGATGGGTTACACGGGGGCTGGGCTGTTCAAGTCCTGGGGAGGCAAGGGCTGTCTATATGTGATGCCTATACAACACCGACTGGACATGTCTCCCCTGCCTTACACGGCACGGGAGTTTGAGGCAATGCCAAAAGCCAGGTGTGTGTCATGCAGTAAACATGTGCCGTTGCAGCTATTAAGTCTGCATGTGGAGACCTGTACAAAGCCGGAACTTGATGAGATCCACTCTGACTAcaatgatgatgttgatgaagGGGCTATACTGCAGCAATCTAATTTGGGGAGTACGGATTCCATGGAGCGTCCATCCTGCTCCCAAGTTCCTGATGTTAAAacaACATGTCCAATATGTCAGGAGTGGATTTCCTCTGACATTGTGGAAATCCACGCAAGCATATGTGGTGAAAGAGTTTGTAATGAAACTGAGGAGAGCCAGGCACATCCGACTGAAAgCATTTCTGATGTCATCAGAGTACTCCATGAAAGGGTGGACAACACAGCTATATTCAGCATCTGTGTGACGAGGGAGGACATGCTTGAAAGGGGGATGAAGCAGTGGCAGCGCCAGAAAAAAGCATCCCCCAAAAACCCTCTTAGGGTAACATTCCTCGGAGAGACCGGGATTGACAACGGGGCTCTGAGGAAGGAGTTTTTAACTGaaatggtGACAGGTATACAGAGCAGATTCTTCGTGGGAGGGGACAATGGCAAAACCCCCAAGTATTCAATGACCGACATGGACAAACACCACTTCAAGACTGTCGGAGAGATATTGGCAGTGAGCATTGCTCAAGGTGGACCACCCCCAAATTTCTTCATGGACTGGTGTTACAACTACATGTCCACTGGAGAACTGGACCAGGAAGCGATCACTGAGATGGCTGTTACAGACCCAGAACTCATTGATTTAATACAAGAGATTCGGGCAGCTGACAACACATCCCTGATGGAGTGCACAGACAGGATTTTGTCATGTGGATATACAGGGCCAGTATCCATTGAAAAAAGGGAAGATATTTTGCGatcTATTGTCCTATACTCAACAGTGAGGTTACTTCCTATGCTCCAGCAAATCTGCTCAGGTATGAAGCTGTATGGCCTCCTCAGCTTGGTCCAGAAAGAAAAGGACATCTGCAGACAGCTCTTTGTACTTGGATCGTTTAGCAAGGTGGATGCTGATTTCTTGGTGAAGTCACTATCACCTGTCTTCAGTGAGAAGGGTACAATGAGGCGTCAGAGAGAGTGCAGAGTAGTCAATTTTCTGCAGGACTTCATACAGGACATGGAGGACGAAGAAGACGGAATCAACACGGTCTTACCTGAAAGCGCGTCGGAGGATGAAGGTGACAAGGAAGTGCTAATTAATGTGGGCAAGTTCTCCCATCTCACCACACAGGAGGAGTTCAGAAGGGTTATTGCTCAAGCTATAACATATGGCTATGACTTTGGCCGCAGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247995 False 1179 TUCP 0.50 9 8783788 8787217
XM_039781321.1 True 2413 mRNA 0.49 20 8781328 8787218

Neighbor

gene id symbol gene type direction distance location
LOC120546396 NA coding downstream 12304 8767999 ~ 8769024 (-)
LOC120546393 NA coding downstream 40989 8723103 ~ 8740339 (-)
LOC120546390 NA coding downstream 64894 8715565 ~ 8716434 (-)
LOC120546389 NA coding downstream 104643 8675816 ~ 8676685 (-)
LOC120546388 NA coding downstream 120016 8660443 ~ 8661312 (-)
LOC120546398 NA coding upstream 2614 8789832 ~ 8790701 (-)
LOC120547332 LOC103374244,LOC103457752,LOC100712349,LOC103148799 coding upstream 130295 8917513 ~ 8931493 (-)
mep1a.1 LOC103374245,LOC100712081,LOC105920587 coding upstream 148706 8935924 ~ 8950403 (-)
LOC120546235 LOC107100257 coding upstream 174462 8961680 ~ 8991368 (-)
LOC120546203 NA coding upstream 211674 8998892 ~ 9000320 (-)
G183068 NA non-coding downstream 9743 8771288 ~ 8771585 (-)
G183042 NA non-coding downstream 301982 8478912 ~ 8479346 (-)
G183027 NA non-coding downstream 349654 8431362 ~ 8431674 (-)
G183013 NA non-coding downstream 535563 8245565 ~ 8245765 (-)
G183006 NA non-coding downstream 589854 8191178 ~ 8191474 (-)
G183136 NA non-coding upstream 211357 8998575 ~ 8998828 (-)
LOC120546288 NA non-coding upstream 311153 9098371 ~ 9099326 (-)
G183175 NA non-coding upstream 339503 9126721 ~ 9129230 (-)
G183177 NA non-coding upstream 346318 9133536 ~ 9134536 (-)
G183178 NA non-coding upstream 347327 9134545 ~ 9134808 (-)
opn5 opn5,LOC102784832,LOC100710023,LOC102313452,LOC104967814,LOC106933152,LOC108249775 other downstream 654664 8049458 ~ 8126664 (-)
G182977 NA other downstream 756284 8024715 ~ 8025044 (-)
G182952 NA other downstream 1014942 7761565 ~ 7766386 (-)
G182764 NA other downstream 2080211 6700491 ~ 6701117 (-)
cgrrf1 NA other downstream 2512185 6232742 ~ 6269143 (-)
LOC120546609 LOC104943934,LOC103373611,LOC100711814,LOC102780583,LOC101487794,LOC102295678 other upstream 233742 9020960 ~ 9024565 (-)
G183176 NA other upstream 342355 9129573 ~ 9133472 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other upstream 1312260 10099478 ~ 10101061 (-)
LOC120546776 NA other upstream 1668026 10455244 ~ 10610625 (-)
G183528 NA other upstream 1733499 10520717 ~ 10521410 (-)

Expression


Co-expression Network