G183180


Basic Information

Item Value
gene id G183180
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 9147089 ~ 9148100 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU248122
CAGGGagccaggttccattcagccccagatgatttgttctgggagatgggtcagTCCTAAAAtggatggataagcacataagaagctgggtccagactagtttgatgatagccagacagattattttaagaggatggaagaatgaaggggtgccgtcaatccaggagtgggcttgtgagatggctagagTGGGTTGCCAGGTTGGATGTCTACCCTAGAAAATGGGGAGAGTAGCTGAGCTTTCTGGAGGGGCCCTAAGAAGATATGTGCTGGGGGGAGACGTGTATGATGGGCTAATGGTGTTGTCATTCATACATacgtttatttggtttatggcTTATTGTGTATTGTGGCAGGGAACAGAAGGTAGCATTAGAAACCTTTTTTATGTCTGGTGTTCTTGTAAATatatctttgtgtttgtttgttctttACATGTACAGAAGACTAAGATTATGaaaagatatattttttattttaataagcaACCATTTTGTCCCAGTCAGTCTTGTTGTAAAAAGTTTGTCATGAATGGGTGGATGGCTATCTTCTGTTTGTAGTCTCTGGGACAGTAGGTAGTAGGTGCTAAGTAAGTAGGTTTGGGTTGGGTGAACCAAACCCAAGGCGGAGATTAGGATAGTTTGGAGCAGAAAATCCCATTGAATAGATTTAAATGTCTGTTGTAGAAATTCTGACGTAACTATGAAAATACAGGTTATACATTGAGATATTTTTTACTCTACTCAAACTCATGAAAAATACATTCTTGTATTAGATCGTTTAACTCAgaggtcttcaacatttttcaggACAAGGACCCCCTGCTACATCTATTGTATTGAAGTGagctgcatattaaactgggtggATGGATAATTAttcatacatcatgttttatttgttaaacatacatgtgtacagcacagtgaatccttaagcttaactgtggctgtggatggctaccatagtggctacctAACCTATAGTAAGCATCATCAATGTTGTGTGCATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248122 True 1012 lncRNA 0.40 1 9147089 9148100

Neighbor

gene id symbol gene type direction distance location
brox brox,LOC102780098 coding downstream 126661 9003269 ~ 9020428 (-)
LOC120546203 NA coding downstream 146769 8998892 ~ 9000320 (-)
LOC120546235 LOC107100257 coding downstream 155721 8961680 ~ 8991368 (-)
mep1a.1 LOC103374245,LOC100712081,LOC105920587 coding downstream 196686 8935924 ~ 8950403 (-)
LOC120547332 LOC103374244,LOC103457752,LOC100712349,LOC103148799 coding downstream 215596 8917513 ~ 8931493 (-)
disp1 disp1 coding upstream 6924 9155024 ~ 9288203 (-)
LOC120547212 NA coding upstream 182384 9330484 ~ 9402765 (-)
si:ch211-63o20.7 LOC103362993,LOC101481409 coding upstream 312678 9460778 ~ 9470517 (-)
znf395b znf395 coding upstream 357332 9505432 ~ 9527428 (-)
paqr8 paqr8 coding upstream 401904 9550004 ~ 9556929 (-)
G183178 NA non-coding downstream 12281 9134545 ~ 9134808 (-)
G183177 NA non-coding downstream 12553 9133536 ~ 9134536 (-)
G183175 NA non-coding downstream 17859 9126721 ~ 9129230 (-)
LOC120546288 NA non-coding downstream 47763 9098371 ~ 9099326 (-)
G183136 NA non-coding downstream 148261 8998575 ~ 8998828 (-)
G183189 NA non-coding upstream 85411 9233511 ~ 9233798 (-)
G183214 NA non-coding upstream 177147 9325247 ~ 9327288 (-)
G183213 NA non-coding upstream 179300 9327400 ~ 9328523 (-)
G183256 NA non-coding upstream 345079 9493179 ~ 9493404 (-)
G183258 NA non-coding upstream 353812 9501912 ~ 9505372 (-)
G183176 NA other downstream 13617 9129573 ~ 9133472 (-)
LOC120546609 LOC104943934,LOC103373611,LOC100711814,LOC102780583,LOC101487794,LOC102295678 other downstream 122524 9020960 ~ 9024565 (-)
LOC120546397 NA other downstream 359871 8781328 ~ 8787218 (-)
opn5 opn5,LOC102784832,LOC100710023,LOC102313452,LOC104967814,LOC106933152,LOC108249775 other downstream 1020425 8049458 ~ 8126664 (-)
G182977 NA other downstream 1122045 8024715 ~ 8025044 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other upstream 951378 10099478 ~ 10101061 (-)
LOC120546776 NA other upstream 1307144 10455244 ~ 10610625 (-)
G183528 NA other upstream 1372617 10520717 ~ 10521410 (-)
G183650 NA other upstream 2226008 11374108 ~ 11374615 (-)
ost4 NA other upstream 3759202 12907302 ~ 12908747 (-)

Expression


Co-expression Network