G183258


Basic Information

Item Value
gene id G183258
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 9501912 ~ 9505372 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU248219
ACAGTTTTATTGTAGTTTTTTCTCTATACACATTTTGTCTGAAGACTCGGAACAATGGTATCATGTTAGAAATGTAGTCTGAAATGTACACTGTATTCACAAGttccatttttttgtgttggattgacagagaaacgcacacacacacatgcatgtgcacaGTCACAATCACAGTTCAATCATCCACACACTCGTATGCATACATTATTACACCTCGTAATCAAACACGAATCAGCACAAAAACACTATTAAGATGCAAAATAATGGGACCTGCAAGTGGAGGGAAAATATCTTGAcggcaaaaacaaatgaacatttttatatttttttttcacccaagCAGGAACAGAATATTCTGTGACATGCACAGTTCATTTCATCCCTCTGCTCTTAAACAGTACATGAAGGGCTGGTGTCACTTAGACCTTCTTTCCCATCCCACAGTGGGATACACACACGTATTGGCCCTGCCAGTTTCCAGCTTCATGCACCAACGTACAATTGGACTAAAGTGACATGAACAGCTGTGCAAATAGGCCCAGGGTGGAGTAATGTTTGAGAACTGACCGGGGATTAGTTTCTCCTTACTCCTGAGTTCTGCATTCGCAAACACTTTAAATATATAGCTCCCTCATTTCTATAGGGTAAGTTAGGGACTGTACAAAAATTATTTGAAATCCCCAAAAAAATTTgatctttttgtttttccagacataaataatatataaaaatataataaaataaaaaggaagatCCCGCTCTCTGCTCTTGCTCAGCATCGCAATTTATTAAAGGAACTAACATTTCGAGAGAATTTAACATCTAACATTTAACATCTAGTGTTTAAtatccagtggtgtagtctacatgatacgcaggtatacccactaagaaagctccaagatttccatatacccacttaaaaatgccaaaTGACACGCAACACATAtgttccattatatttttgatatatttttaattatcatctgagtttttcttcttcacataaataaaggtatttccaccgtaaattggtgcagtGTATCCAAATACAGggaatgaagtcgttgatgccTTAAAACTTCCTTGgagaggacacccagaccccccactatgaaaTGGCCCCCCTcttccccaaaggcagattctggccaatatacagttcagtatacccactacaatacattagactacaccactgttaATATCTACCTTTTTCAAGTCCGGTGTGATATTTTAACACACTTGCATCTAAGAATTGTTGGCTGTGCAAATTTTTTCTTCGGAAAGatcttttgttttaaattgagTGGCAGTGATATTCCACATTGTGTAATTTGTCGAAAAATTGGCAATTTATAAATCCACTTCTAAGGTGCACATTTATGGCAATAAACATTGTTCTTCGAGTCACATATTATGGGTTAAATTAAGGTATAATTAATTGTCCTACAATTTTTCACACTTTGCTTTCCTTTAGCTTTTAacagtgaaattattttttgagaTATTGGAGGGAGGGTGCTGTTCAATGGGAGggtccaaaaaataaataatttataacACTTCAGGAGGCTCTGCTTTTCTAAAAAGTTTCAGCTACCCTCCCGACGCAATTCATTTTTGATATGATGAGCCATGAGCTGTCATACAGGCACTATTAATACtgtgaggaggaggaaaaataGACACTAGTTTCCTCAGGTTTTGTTAAAGAATTGTCATGATCTTTCAGTTTGACTCACATATTGAAATATCAGACATAAATtaagtgtatttgtatgtttgaCATCTTATGtcaattttttatttgactGTAATTGCAGAATGATGATCCCAAGTCAGTATCCAATGGGCAACAAGTTTGTTCCTCAAACACTAGAGGACAGTATAGTTCCACTGAAAGGAGCCTCGGGGAGTGTGCCAACCTGCTGCTCATTCCTTTGAGAGAAACTCATCACTTGCAAGGTTTACATTGagacacccccccaccccccgctgAATAATATAAACTCAGAACTAAGCGATGGGAACACGGCTTATCTTTGCGTAGGGATGCAAAGTTTCGGTGAGTTTGAAAGTTCAGAAAACCAATTTTGCACACATTGTGTTTAATTAATTAAGTTCCTTGAGCAGTAAATGAGATTCGTAGATCGGTAGCTAACAGTAATTTGTGCTTCATCATTGTCCTACCATCTGGCTGAACCATCTCGAAAGAAAAGTGCTGGTTCACTTCCAATTTGATTCTTgattctaataataataattgtgtatGATTTGTTTTGTCCCAAAATGCCATTTTTAAAAGGGGAAGCCTATGCAGTAACGAATGGGTCCATTACGTGAGAGCTTGACATTAGTAACACAAACTACAGAGTGCaacggaaaaaaaaagaacgaaaAAAAAGCCATCCACGCATGCATGAAAGTGCATTCAACATGAGTTTTAAATGTCACACCCTCAGGTCTCACCTCTGGTGAAAAACTTGCAGTGAACCAGTTTTCCAATCTCATTtagctccttttttttattattataacgacacacaaaaaaatatatccaATTGCACTTCTCTAATTCTTTTATTTGATAGAATGGTGTGAAAATATGCTTAATAAGAAGGACATCACGGTCAAAACATTCCTTGATACTTAGAGACACAAAAAGAGGCGCGGCGAGATTGGCGGAGGCTGTTCTTTTTCGGGTGATGACACGATTCAAATGCGGAGTGAGATGCCGAAAACATGATCTGGTTGAGGTAACTGGGAGCAGGGAGAGCGACGTAGATGCGTTACAGTTTGTTTTGCCTCCACACGCGAGTTACAGGGATGTTGTTGAACCTGCCGCTGCGGCTGCTCCTCATGCCCAGGTACTGCCTGAGCAGCTGGTTCACCCGCTTCTGACTGTTCCATTTGCGGGCAGATTTCCGGACGCCTATAAAGCCGCCGTAGCGCTTTTGTAGGGGCCTCACGGCCGGGCCGATCAGCTTCCTGTACGCGTGGCGCCCCCTCTGAAAGCCACCAAAGCGTTTGGATAAGGTGACGGCCCCTAAGGCGTCATCCTCGTCCCCTTCCGGCTGGCTGTCGCTCCCCGCGTTCCTCTCGTCCCTCGGCTTCCTCTCTGCGTCCGCCACGCTGAGATCCAGACCCCGCAggccctccccctcctcctcctcctcggatTCCGGCAGAGATGAGTCATACTGGGCACTGCGCGGCTCAAAGGGCGCCTCATCCCGCTCCCCCTCCTGGAAGGGCTCCACGGCCGCCGACTGCAGCAGTTCACTGTCAGAGTTCAGATCCAGAGAGGTGAGCTCCAGCTCCTGTCCCGCTCTCTTGAACAGAGCGTCTCGCTCCGACAGCGCGGGATAGTGCGATAGCTTGACGGCACGTCTACACACCTCCCATGTGAGCGAAGAGGAGACGTGACCCTCGCACTCCAACAAACACACctgcagagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248219 True 3461 lncRNA 0.42 1 9501912 9505372

Neighbor

gene id symbol gene type direction distance location
si:ch211-63o20.7 LOC103362993,LOC101481409 coding downstream 31395 9460778 ~ 9470517 (-)
LOC120547212 NA coding downstream 99147 9330484 ~ 9402765 (-)
disp1 disp1 coding downstream 213709 9155024 ~ 9288203 (-)
brox brox,LOC102780098 coding downstream 481484 9003269 ~ 9020428 (-)
LOC120546203 NA coding downstream 501592 8998892 ~ 9000320 (-)
znf395b znf395 coding upstream 60 9505432 ~ 9527428 (-)
paqr8 paqr8 coding upstream 44632 9550004 ~ 9556929 (-)
stmn4 stmn4 coding upstream 98116 9603488 ~ 9622711 (-)
LOC120546991 NA coding upstream 348368 9853740 ~ 9855384 (-)
LOC120547068 NA coding upstream 439493 9944865 ~ 9945741 (-)
G183256 NA non-coding downstream 8508 9493179 ~ 9493404 (-)
G183213 NA non-coding downstream 173389 9327400 ~ 9328523 (-)
G183214 NA non-coding downstream 174624 9325247 ~ 9327288 (-)
G183189 NA non-coding downstream 268114 9233511 ~ 9233798 (-)
G183180 NA non-coding downstream 353812 9147089 ~ 9148100 (-)
G183263 NA non-coding upstream 27174 9532546 ~ 9543226 (-)
G183296 NA non-coding upstream 181350 9686722 ~ 9687119 (-)
G183298 emilin1,LOC103398511,LOC103372345 non-coding upstream 203681 9709053 ~ 9715339 (-)
G183299 LOC103398511 non-coding upstream 211218 9716590 ~ 9718205 (-)
G183317 snap25,snap25a,LOC107719097,LOC102796069,LOC107698362,LOC107599071 non-coding upstream 324504 9829876 ~ 9846858 (-)
G183176 NA other downstream 368440 9129573 ~ 9133472 (-)
LOC120546609 LOC104943934,LOC103373611,LOC100711814,LOC102780583,LOC101487794,LOC102295678 other downstream 477347 9020960 ~ 9024565 (-)
LOC120546397 NA other downstream 714694 8781328 ~ 8787218 (-)
opn5 opn5,LOC102784832,LOC100710023,LOC102313452,LOC104967814,LOC106933152,LOC108249775 other downstream 1375248 8049458 ~ 8126664 (-)
G182977 NA other downstream 1476868 8024715 ~ 8025044 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other upstream 594106 10099478 ~ 10101061 (-)
LOC120546776 NA other upstream 949872 10455244 ~ 10610625 (-)
G183528 NA other upstream 1015345 10520717 ~ 10521410 (-)
G183650 NA other upstream 1868736 11374108 ~ 11374615 (-)
ost4 NA other upstream 3401930 12907302 ~ 12908747 (-)

Expression


Co-expression Network