G183530



Basic Information


Item Value
gene id G183530
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 10557487 ~ 10558119 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU248537
ctttgacttggccattctaacacctggatatgtttatttgtgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagggtgatgagcggtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagtttgattttggtttcatctgaccacagcaccttcttccacatgtttggtgtgtctcccaggtggcttttggcaaactttaaacgacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcagtatacgactgattgttgtcctatggacagagtctcccacctcagctgtaggtctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctcattgtatgagctgaaagtttagag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU248537 True 633 lncRNA 0.44 1 10557487 10558119

Neighbor


gene id symbol gene type direction distance location
fam49a fam49a coding downstream 108077 10398802 ~ 10449410 (-)
fzd3a fzd3 coding downstream 178360 10347000 ~ 10379127 (-)
lft1 LOC104927083,LOC104968260,LOC100695903,LOC101475792,LOC102299013 coding downstream 328482 10226816 ~ 10229005 (-)
kif26bb NA coding downstream 349162 10178309 ~ 10208325 (-)
cnstb LOC103373900 coding downstream 383509 10148075 ~ 10173978 (-)
sf3b6 sf3b6,pm14,SF3B6 coding upstream 103998 10662117 ~ 10666300 (-)
pla2g7 pla2g7,LOC102800283 coding upstream 135720 10693839 ~ 10708837 (-)
glrx5 glrx5 coding upstream 166351 10724470 ~ 10728525 (-)
LOC120547228 LOC104952422,LOC104931204 coding upstream 988067 11546186 ~ 11548350 (-)
LOC120546403 NA coding upstream 1017354 11575473 ~ 11576057 (-)
G183497 NA non-coding downstream 323919 10220918 ~ 10233568 (-)
G183492 hnrnpu non-coding downstream 340361 10216351 ~ 10217126 (-)
G183457 NA non-coding downstream 379918 10176900 ~ 10177569 (-)
G183458 NA non-coding downstream 382132 10174736 ~ 10175355 (-)
LOC120547073 NA non-coding downstream 491201 10064593 ~ 10066286 (-)
G183531 NA non-coding upstream 7797 10565916 ~ 10566164 (-)
G183534 NA non-coding upstream 32961 10591080 ~ 10591338 (-)
G183594 NA non-coding upstream 196877 10754996 ~ 10780282 (-)
G183616 NA non-coding upstream 389697 10947816 ~ 10948114 (-)
G183621 NA non-coding upstream 405713 10963832 ~ 10964049 (-)
G183528 NA other downstream 36077 10520717 ~ 10521410 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other downstream 456426 10099478 ~ 10101061 (-)
G183176 NA other downstream 1424015 9129573 ~ 9133472 (-)
LOC120546609 LOC104943934,LOC103373611,LOC100711814,LOC102780583,LOC101487794,LOC102295678 other downstream 1532922 9020960 ~ 9024565 (-)
LOC120546397 NA other downstream 1770269 8781328 ~ 8787218 (-)
G183650 NA other upstream 815989 11374108 ~ 11374615 (-)
ost4 NA other upstream 2349183 12907302 ~ 12908747 (-)
LOC120547209 NA other upstream 2402379 12960498 ~ 13007868 (-)
hmgn3 hmgn3,LOC104958971 other upstream 2587345 13145464 ~ 13215900 (-)
runx2b runx2,LOC102312376 other upstream 2697766 13255885 ~ 13303784 (-)

Expression



Co-expression Network