G183639


Basic Information

Item Value
gene id G183639
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 11189654 ~ 11210793 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU248683
cttttattttcaaaaagctTCACTTAAGTATTTACAGTTTgtgcaaaaacatttaaaggttTTCAAGGACTTTACATTGTAAGTTCAACCTCAAGGCACATACATGGAACAACATCAATATTTCATCATGAGAACAGAAATTTAACTTTGGTTCCTAAGAAAAACTGGGTGTGGATGGCGTTAACGTAACACTGCAGCGTCTCCGATGAGAAGCCAGGATGGCAAAGTAGCCCAAACACAGCCGTTTTACATGCACTGTAAAGTTTCCAGCCTTCTTTCTCTTAAACCTTCCTGTATGGTTGCTCGTATTGTACCTCAACCGCCACTGGGGTGAttgcatgaaaaataaaaaaattaaattaaatcccAAACCTTgtatgattaaaaaataaaacaaaaaggctATGAAGctaaatacagtacatgcaaaaaaaaaaaatccttgaaTGAATGTTACTGGCTAATAGTTATTTGCACTGCAAGTTGTCGCCTGCAGGAAGAAAAAGACGTTTTATTcaaccacttgtgtgtgtgtgtgtgtgtgttctgagatCTTTACAAACCTTGTATTTTACCTTATTTGGTAAAAATATGCTGCTACACATTGTTTCTTATCATTTCATACATGATGTTGGGAAACTACACATCCAGAGTAAGAATGACACAGCACTGAGTTGTTAAAAACAGCCGTGCCGTttaggagtaaaagtaaaagggCCCGTGAGACGGCAACTTACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248683 True 739 lncRNA 0.37 2 11189654 11210793

Neighbor

gene id symbol gene type direction distance location
glrx5 glrx5 coding downstream 461129 10724470 ~ 10728525 (-)
pla2g7 pla2g7,LOC102800283 coding downstream 480817 10693839 ~ 10708837 (-)
sf3b6 sf3b6,pm14,SF3B6 coding downstream 523354 10662117 ~ 10666300 (-)
fam49a fam49a coding downstream 740244 10398802 ~ 10449410 (-)
fzd3a fzd3 coding downstream 810527 10347000 ~ 10379127 (-)
LOC120547228 LOC104952422,LOC104931204 coding upstream 335393 11546186 ~ 11548350 (-)
LOC120546403 NA coding upstream 364680 11575473 ~ 11576057 (-)
LOC120546716 calm1,LOC107396020,LOC102778633,LOC102293206,LOC103380713 coding upstream 408911 11619704 ~ 11634330 (-)
LOC120547092 psmc1 coding upstream 428053 11638846 ~ 11650060 (-)
kcnk13b kcnk13,LOC106526329 coding upstream 449201 11659994 ~ 11673089 (-)
G183621 NA non-coding downstream 225605 10963832 ~ 10964049 (-)
G183616 NA non-coding downstream 241540 10947816 ~ 10948114 (-)
G183594 NA non-coding downstream 409372 10754996 ~ 10780282 (-)
G183534 NA non-coding downstream 598316 10591080 ~ 10591338 (-)
G183531 NA non-coding downstream 623490 10565916 ~ 10566164 (-)
G183656 NA non-coding upstream 236182 11446975 ~ 11447319 (-)
G183665 NA non-coding upstream 289288 11500081 ~ 11500653 (-)
G183682 NA non-coding upstream 325478 11536271 ~ 11537451 (-)
G183685 NA non-coding upstream 329721 11540514 ~ 11544065 (-)
G183720 brms1l,LOC103358934 non-coding upstream 375243 11586036 ~ 11590560 (-)
LOC120546776 NA other downstream 579029 10455244 ~ 10610625 (-)
G183528 NA other downstream 668244 10520717 ~ 10521410 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other downstream 1088593 10099478 ~ 10101061 (-)
G183176 NA other downstream 2056182 9129573 ~ 9133472 (-)
LOC120546609 LOC104943934,LOC103373611,LOC100711814,LOC102780583,LOC101487794,LOC102295678 other downstream 2165089 9020960 ~ 9024565 (-)
G183650 NA other upstream 163315 11374108 ~ 11374615 (-)
ost4 NA other upstream 1696509 12907302 ~ 12908747 (-)
LOC120547209 NA other upstream 1749705 12960498 ~ 13007868 (-)
hmgn3 hmgn3,LOC104958971 other upstream 1934671 13145464 ~ 13215900 (-)
runx2b runx2,LOC102312376 other upstream 2045092 13255885 ~ 13303784 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G220541 NA non-coding CI01000051 null 4800843 ~ 4802647 (-)