G183734


Basic Information

Item Value
gene id G183734
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 11659054 ~ 11659573 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU248810
ccttcacaaaagtgcttgttttgccgctgacgggctcagattaatattctaagtgtctgacaacattaaggAAAGGATTtataaggaggtcgacctttctgttaaagagtaagatcctttttttaaacaaaaacattcgcgaaattgcattcgctaaacccaccagactccatgtaaataaacatcaCAGTCATTtcagcatcgtaaaatacacttccttcaaagtcaacagaaacaaattaaaactgcgaaaagccgttttgggttgccccttcacttttccaaccatcacaactcaagttttggttgaaataaacacagagtttaccgatttacatgtgaaaatatgttggctctatacacgctaaaagtattacttttttaaatggagtctggtgggtttagcgctagcgacttcaggttaaacagaaaggtctcaaagaggttttaaaggtgcatctctgaagggatcctttccataatgttgtcagacacttagaatattaatctgagcctgtcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248810 True 520 lncRNA 0.38 1 11659054 11659573

Neighbor

gene id symbol gene type direction distance location
LOC120547092 psmc1 coding downstream 8994 11638846 ~ 11650060 (-)
LOC120546716 calm1,LOC107396020,LOC102778633,LOC102293206,LOC103380713 coding downstream 24724 11619704 ~ 11634330 (-)
LOC120546403 NA coding downstream 82997 11575473 ~ 11576057 (-)
LOC120547228 LOC104952422,LOC104931204 coding downstream 110704 11546186 ~ 11548350 (-)
glrx5 glrx5 coding downstream 930529 10724470 ~ 10728525 (-)
kcnk13b kcnk13,LOC106526329 coding upstream 421 11659994 ~ 11673089 (-)
tshr tshr coding upstream 233961 11893534 ~ 11918141 (-)
nrxn3b LOC102203786,LOC101486071,LOC103457817 coding upstream 367975 12027548 ~ 12358231 (-)
trnat-ugu_2 NA coding upstream 923596 12583169 ~ 12583241 (-)
ccnk ccnk coding upstream 1036364 12695937 ~ 12703184 (-)
G183732 NA non-coding downstream 92 11658438 ~ 11658962 (-)
G183720 brms1l,LOC103358934 non-coding downstream 68494 11586036 ~ 11590560 (-)
G183685 NA non-coding downstream 114989 11540514 ~ 11544065 (-)
G183682 NA non-coding downstream 121603 11536271 ~ 11537451 (-)
G183665 NA non-coding downstream 158401 11500081 ~ 11500653 (-)
G183747 NA non-coding upstream 39479 11699052 ~ 11699965 (-)
G183753 NA non-coding upstream 87558 11747131 ~ 11747593 (-)
G183781 NA non-coding upstream 128428 11788001 ~ 11788321 (-)
G183788 NA non-coding upstream 207588 11867161 ~ 11869156 (-)
G183792 NA non-coding upstream 225004 11884577 ~ 11886506 (-)
G183650 NA other downstream 284439 11374108 ~ 11374615 (-)
LOC120546776 NA other downstream 1048429 10455244 ~ 10610625 (-)
G183528 NA other downstream 1137644 10520717 ~ 10521410 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other downstream 1557993 10099478 ~ 10101061 (-)
G183176 NA other downstream 2525582 9129573 ~ 9133472 (-)
ost4 NA other upstream 1247729 12907302 ~ 12908747 (-)
LOC120547209 NA other upstream 1300925 12960498 ~ 13007868 (-)
hmgn3 hmgn3,LOC104958971 other upstream 1485891 13145464 ~ 13215900 (-)
runx2b runx2,LOC102312376 other upstream 1596312 13255885 ~ 13303784 (-)
fkbp1b fkbp1b other upstream 1799029 13458602 ~ 13468065 (-)

Expression


Co-expression Network