G183747


Basic Information

Item Value
gene id G183747
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 11699052 ~ 11699965 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU248823
cttgaaatcatgtgtcccacaattattggcacccctgatgttaatactttgtacaacccccttttgccaacaagacagcacttaatctccttctataacatttcacacgattggagaacacagagagagggatctttgaccattcttctttgcacaatctttctagatcatccagagtcctgggtcctctctcatgcactctcctctttagctcaccccacaggttttcgattgggttgaggtctggggactgagatggccatgggaggaccttgagtttgtgactgctgaaccatttttgtgtagattttgccacatgtttaggatcattatcctgctgaaagacccagtgatgacccatcttcagctttctggcagaggccatcaggtttttatttaaaatgtcctggtagttcaaagcattcataatgccatgcaccctaacaaggttcccagggcctttggaagagaaacagccccaaagcatcacaGATCCTCCACCATACTTCACGGTGGTGAAGGTGCGTTTCGGCatactcatcttttgttttacgccagacccacttagagtgtttgttgccaaaaagctcaatcttagtctcatctgaccaaagcacacaatcccagttgaagtcccagtgccgcttagcaaactccagacgtttacgtttgtgagtgttagtgagaaaaggctttttccttgcatgcctcccaaacagcttgttggcatgtagagagcgtctgatgttttttttttgagactTCGTGACCGCAAGATGCCACTCTTTGATGCAATTCTGTGACAGTGagcttaggacttttttttacttctcttaccatcctcctcactgtgcgttgtggcaagataaacttgggacctcttccagccttgtttgtcactgttccagttgttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248823 True 914 lncRNA 0.45 1 11699052 11699965

Neighbor

gene id symbol gene type direction distance location
kcnk13b kcnk13,LOC106526329 coding downstream 25963 11659994 ~ 11673089 (-)
LOC120547092 psmc1 coding downstream 48992 11638846 ~ 11650060 (-)
LOC120546716 calm1,LOC107396020,LOC102778633,LOC102293206,LOC103380713 coding downstream 64722 11619704 ~ 11634330 (-)
LOC120546403 NA coding downstream 122995 11575473 ~ 11576057 (-)
LOC120547228 LOC104952422,LOC104931204 coding downstream 150702 11546186 ~ 11548350 (-)
tshr tshr coding upstream 193569 11893534 ~ 11918141 (-)
nrxn3b LOC102203786,LOC101486071,LOC103457817 coding upstream 327583 12027548 ~ 12358231 (-)
trnat-ugu_2 NA coding upstream 883204 12583169 ~ 12583241 (-)
ccnk ccnk coding upstream 995972 12695937 ~ 12703184 (-)
LOC120546273 NA coding upstream 1046421 12746386 ~ 12747738 (-)
G183734 NA non-coding downstream 39479 11659054 ~ 11659573 (-)
G183732 NA non-coding downstream 40090 11658438 ~ 11658962 (-)
G183720 brms1l,LOC103358934 non-coding downstream 108492 11586036 ~ 11590560 (-)
G183685 NA non-coding downstream 154987 11540514 ~ 11544065 (-)
G183682 NA non-coding downstream 161601 11536271 ~ 11537451 (-)
G183753 NA non-coding upstream 47166 11747131 ~ 11747593 (-)
G183781 NA non-coding upstream 88036 11788001 ~ 11788321 (-)
G183788 NA non-coding upstream 167196 11867161 ~ 11869156 (-)
G183792 NA non-coding upstream 184612 11884577 ~ 11886506 (-)
G183813 NA non-coding upstream 302752 12002717 ~ 12025499 (-)
G183650 NA other downstream 324437 11374108 ~ 11374615 (-)
LOC120546776 NA other downstream 1088427 10455244 ~ 10610625 (-)
G183528 NA other downstream 1177642 10520717 ~ 10521410 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other downstream 1597991 10099478 ~ 10101061 (-)
G183176 NA other downstream 2565580 9129573 ~ 9133472 (-)
ost4 NA other upstream 1207337 12907302 ~ 12908747 (-)
LOC120547209 NA other upstream 1260533 12960498 ~ 13007868 (-)
hmgn3 hmgn3,LOC104958971 other upstream 1445499 13145464 ~ 13215900 (-)
runx2b runx2,LOC102312376 other upstream 1555920 13255885 ~ 13303784 (-)
fkbp1b fkbp1b other upstream 1758637 13458602 ~ 13468065 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G2132576 NA non-coding NC_048592.1 CM023246.2 36257804 ~ 36258244 (+)